BAC Information

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BAC

Clone NameB6Ng01-330N23
Chromosome14 (Build37)
Map Location 75,099,373 - 75,190,303
singlet/doubletdoublet
Overlap geneHtr2a, LOC668508, Esd, Lrch1
Upstream geneLOC100043734, EG629578, LOC629583
Downstream geneENSMUSG00000075519, LOC100043169, 5031414D18Rik, 4921509B22Rik, LOC100043176, Lcp1, Cpb2, Zc3h13, Gm912, Spert, 4930564B18Rik, Cog3, Slc25a30
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-330N23.bB6Ng01-330N23.g
ACCGA117398GA117399
length6101,039
definitionB6Ng01-330N23.b B6Ng01-330N23.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(75,099,373 - 75,099,982)(75,189,264 - 75,190,303)
sequence
gaattccttaataataactttcaatgatttcaactatatcatatgattca
gacactcatattctcaaagggcaaaaatgtcaaatggagataaagcttcc
ctgggaaagtggggagaggtgttaagtgacagccaacaacctgcatctcc
aagtcacaattcagtgggaccccatcacagttcttaaccacagcctcttc
tcttgggtggggccagcagagccaggagccactgaacccagagtctgtga
tgaggcagcctctgtgctgcatgctgcagcttagctctcagaggccactg
acatggttattgtttcaatgtcaggaaagagcctggtcattcatatttct
taaagtctgtaaattgctcttggaatgaggcacaggcaacgtaattattt
aaagcttcctgggttactaaaatctgcaagcagagttgggagcaaccatt
acatgtggcagagagcaagtgaaggttttaagttgtctttctaatttcta
gccttaaaaatgtactgcctcactggaggaaacttaattggggattaaga
atgatgattccaatttctgagaatcattgaagagaaatgtgtgtgtgtgt
gtgtgtgtgt
gaattcatttgcctgatttctaactcctaagagtcgcagtctaaagctta
tacttgtcacggtatccctgccttgcatttgaatctattaaaaggcactc
tagtccgcattcttaacttccaaggaagaggaagctaagtttcaaagccc
tgtgcttccacagagaagcaaagtgcataggttttgtttgtttgtttttt
tgtctcagtgtcatggtaaggttcacttagtgtatggtttagcactgtga
gctctctttgcttagctgaaaggtgacacttggagaatgggttttgtgtt
cgtgtttcgtacccctgctaagtgcttccctatgctaagcgtgcctctaa
cattacaaccagacagtctccactgttgtggaacctaaatttggaagtta
atgtgttcagatctggagagtaatttgggattttttttttttctgtcaga
ggagaaattaagaaatgaatcaccagggtaaggtcatttctgcaaagatg
atcttcagatccttactcctgtctttcctgggaggttttgaaacacaggt
ttcatttactcctcaacaaacatgcgtctcagcacacagctttgtgggat
gcagaaagagcctgcaactgggctcttgcagagctatggattttatgggg
taatacagaatgataagtgccaagaggtacgcagctaattatctttgggc
attcacaggaagtagagattatgccagttcagggatacagtgaagagacc
agagactttcaaggatggaaagatcagcggagtcctctgtatgcatgtct
caacctcctcaataggccatgtttagagattgtctcctgctaagtgagct
acagccagcaaggtcttatgtcctgttctcactgttagtgacgtgccccc
ttaatcattaaacagctcttgaaatgcaatgggtagggagttaacaccag
tcaggatattctcataggcatcattccctgaagacttgaatccagaagaa
gtagcttggcagctatagctgaaagagtttcttttattt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_75099373_75099982
seq2: B6Ng01-330N23.b_45_654

seq1  GAATTCCTTAATAATAACTTTCAATGATTTCAACTATATCATATGATTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTAATAATAACTTTCAATGATTTCAACTATATCATATGATTCA  50

seq1  GACACTCATATTCTCAAAGGGCAAAAATGTCAAATGGAGATAAAGCTTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACTCATATTCTCAAAGGGCAAAAATGTCAAATGGAGATAAAGCTTCC  100

seq1  CTGGGAAAGTGGGGAGAGGTGTTAAGTGACAGCCAACAACCTGCATCTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGAAAGTGGGGAGAGGTGTTAAGTGACAGCCAACAACCTGCATCTCC  150

seq1  AAGTCACAATTCAGTGGGACCCCATCACAGTTCTTAACCACAGCCTCTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCACAATTCAGTGGGACCCCATCACAGTTCTTAACCACAGCCTCTTC  200

seq1  TCTTGGGTGGGGCCAGCAGAGCCAGGAGCCACTGAACCCAGAGTCTGTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGGGTGGGGCCAGCAGAGCCAGGAGCCACTGAACCCAGAGTCTGTGA  250

seq1  TGAGGCAGCCTCTGTGCTGCATGCTGCAGCTTAGCTCTCAGAGGCCACTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGCAGCCTCTGTGCTGCATGCTGCAGCTTAGCTCTCAGAGGCCACTG  300

seq1  ACATGGTTATTGTTTCAATGTCAGGAAAGAGCCTGGTCATTCATATTTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGGTTATTGTTTCAATGTCAGGAAAGAGCCTGGTCATTCATATTTCT  350

seq1  TAAAGTCTGTAAATTGCTCTTGGAATGAGGCACAGGCAACGTAATTATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGTCTGTAAATTGCTCTTGGAATGAGGCACAGGCAACGTAATTATTT  400

seq1  AAAGCTTCCTGGGTTACTAAAATCTGCAAGCAGAGTTGGGAGCAACCATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTTCCTGGGTTACTAAAATCTGCAAGCAGAGTTGGGAGCAACCATT  450

seq1  ACATGTGGCAGAGAGCAAGTGAAGGTTTTAAGTTGTCTTTCTAATTTCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTGGCAGAGAGCAAGTGAAGGTTTTAAGTTGTCTTTCTAATTTCTA  500

seq1  GCCTTAAAAATGTACTGCCTCACTGGAGGAAACTTAATTGGGGATTAAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTAAAAATGTACTGCCTCACTGGAGGAAACTTAATTGGGGATTAAGA  550

seq1  ATGATGATTCCAATTTCTGAGAATCATTGAAGAGAAATGTGTGTGTGTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATGATTCCAATTTCTGAGAATCATTGAAGAGAAATGTGTGTGTGTGT  600

seq1  GTGTGTGTGT  610
      ||||||||||
seq2  GTGTGTGTGT  610

seq1: chr14_75189264_75190303
seq2: B6Ng01-330N23.g_69_1107 (reverse)

seq1  AAAT-AAAGAAACTCTTTCAGCTAATAAGCCTGCCAGCTTACTTCTTTCT  49
      |||| |||||||||||||||||| |||   ||||||   |||||| ||||
seq2  AAATAAAAGAAACTCTTTCAGCT-ATA--GCTGCCAAGCTACTTC-TTCT  46

seq1  GGA-TCAAGTCTTCAGGGAATTGATGCCTATGAGAATTATCCTGACTGGT  98
      ||| |||||||||||||||| ||||||||||||||| |||||||||||||
seq2  GGATTCAAGTCTTCAGGGAA-TGATGCCTATGAGAA-TATCCTGACTGGT  94

seq1  GTTAACTCCCTA-CCATTGCATTTCAAGAGCTGTTTAATGATTAA-GGGG  146
      |||||||||||| |||||||||||||||||||||||||||||||| ||||
seq2  GTTAACTCCCTACCCATTGCATTTCAAGAGCTGTTTAATGATTAAGGGGG  144

seq1  CACGTCACTAACAGTGAGAACAGGACATAAGACC-TGCTGGCTGTAGCTC  195
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  CACGTCACTAACAGTGAGAACAGGACATAAGACCTTGCTGGCTGTAGCTC  194

seq1  ACTTAGCAGGAGACAATCTCTAAACATGGCCTATTGAGGAGGTTGAGACA  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAGCAGGAGACAATCTCTAAACATGGCCTATTGAGGAGGTTGAGACA  244

seq1  TGCATACAGAGGACTCCGCTGATCTTTCCATCCTTGAAAGTCTCTGGTCT  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATACAGAGGACTCCGCTGATCTTTCCATCCTTGAAAGTCTCTGGTCT  294

seq1  CTTCACTGTATCCCTGAACTGGCATAATCTCTACTTCCTGTGAATGCCCA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCACTGTATCCCTGAACTGGCATAATCTCTACTTCCTGTGAATGCCCA  344

seq1  AAGATAATTAGCTGCGTACCTCTTGGCACTTATCATTCTGTATTACCCCA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATAATTAGCTGCGTACCTCTTGGCACTTATCATTCTGTATTACCCCA  394

seq1  TAAAATCCATAGCTCTGCAAGAGCCCAGTTGCAGGCTCTTTCTGCATCCC  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATCCATAGCTCTGCAAGAGCCCAGTTGCAGGCTCTTTCTGCATCCC  444

seq1  ACAAAGCTGTGTGCTGAGACGCATGTTTGTTGAGGAGTAAATGAAACCTG  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGCTGTGTGCTGAGACGCATGTTTGTTGAGGAGTAAATGAAACCTG  494

seq1  TGTTTCAAAACCTCCCAGGAAAGACAGGAGTAAGGATCTGAAGATCATCT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCAAAACCTCCCAGGAAAGACAGGAGTAAGGATCTGAAGATCATCT  544

seq1  TTGCAGAAATGACCTTACCCTGGTGATTCATTTCTTAATTTCTCCTCTGA  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAGAAATGACCTTACCCTGGTGATTCATTTCTTAATTTCTCCTCTGA  594

seq1  CAGAAAAAAAAAAAATCCCAAATTACTCTCCAGATCTGAACACATTAACT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAAAAAAAAAATCCCAAATTACTCTCCAGATCTGAACACATTAACT  644

seq1  TCCAAATTTAGGTTCCACAACAGTGGAGACTGTCTGGTTGTAATGTTAGA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAATTTAGGTTCCACAACAGTGGAGACTGTCTGGTTGTAATGTTAGA  694

seq1  GGCACGCTTAGCATAGGGAAGCACTTAGCAGGGGTACGAAACACGAACAC  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACGCTTAGCATAGGGAAGCACTTAGCAGGGGTACGAAACACGAACAC  744

seq1  AAAACCCATTCTCCAAGTGTCACCTTTCAGCTAAGCAAAGAGAGCTCACA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCCATTCTCCAAGTGTCACCTTTCAGCTAAGCAAAGAGAGCTCACA  794

seq1  GTGCTAAACCATACACTAAGTGAACCTTACCATGACACTGAGACAAAAAA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTAAACCATACACTAAGTGAACCTTACCATGACACTGAGACAAAAAA  844

seq1  ACAAACAAACAAAACCTATGCACTTTGCTTCTCTGTGGAAGCACAGGGCT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACAAACAAAACCTATGCACTTTGCTTCTCTGTGGAAGCACAGGGCT  894

seq1  TTGAAACTTAGCTTCCTCTTCCTTGGAAGTTAAGAATGCGGACTAGAGTG  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAACTTAGCTTCCTCTTCCTTGGAAGTTAAGAATGCGGACTAGAGTG  944

seq1  CCTTTTAATAGATTCAAATGCAAGGCAGGGATACCGTGACAAGTATAAGC  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTAATAGATTCAAATGCAAGGCAGGGATACCGTGACAAGTATAAGC  994

seq1  TTTAGACTGCGACTCTTAGGAGTTAGAAATCAGGCAAATGAATTC  1040
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGACTGCGACTCTTAGGAGTTAGAAATCAGGCAAATGAATTC  1039