BAC Information

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BAC

Clone NameB6Ng01-331C01
Chromosome14 (Build37)
Map Location 69,976,906 - 70,083,365
singlet/doubletdoublet
Overlap geneEntpd4, Loxl2
Upstream geneAdam7, Adamdec1, Adam28, LOC641033, LOC100043082, Stc1, EG545808, Nkx2-6, Nkx3-1, Slc25a37, D930020E02Rik
Downstream geneR3hcc1, Chmp7, Tnfrsf10b, Rhobtb2, LOC100043701, 1700081D17Rik, LOC668397, Egr3, Bin3, 2610301G19Rik, 9930012K11Rik, Pdlim2, Sorbs3, Ppp3cc, LOC100043115, Slc39a14, EG668450, Piwil2, Polr3d, Phyhip, Bmp1, Sftpc, Lgi3, Reep4, Hr, Nudt18, Rai16, Epb4.9, Fgf17, Npm2, Xpo7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-331C01.bB6Ng01-331C01.g
ACCGA117583GA117584
length961649
definitionB6Ng01-331C01.b B6Ng01-331C01.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(70,082,406 - 70,083,365)(69,976,906 - 69,977,556)
sequence
gaattcatgacctgttaccgggaagggccaaatgggactgcaactgcctc
tgacgtcattacagtgttagatctggatggaagcctagatggagcaccgt
gggctctgatgtgcagacctctgggggtcctactgaaatgcatatgggtt
caacagtctgcagccagctctggcactgagcatgcccaggttctcactgt
gctggcatatactcactccaagggcctggctctgaaaggcagtaatctag
tgcaaacgtttcctgttacatatggattatttgagtccagagaagaggat
ctattataagtttgcggacctctagaagagggattcctggtgcaaggaat
ggcagctgcttttccaaccatgtgcaagcagtgtcctctacttgcccaga
ccgagaacaaaatatctgaatccgattcaagtcaagaagagcaaaggaaa
aaaaggagagaggaggtccagagagcatccatgggccatggtgggattgg
ctgtaggatttccctctattctactgtcctgatcctgtcttcgcagcacc
tgcatcccagccacacacaagctggaagggagcccagaactcccaggcaa
tgtgacccagttggccttactgtcaggttgttgttggtcagtggattagc
aggcttacaccaggtctcatgactctgagtcctggagttcctctctccat
acctcctgtcttgctagagatatcaaaaaatactaactaaaacaagaggc
ccaatggagatgtgcagtggcagcgggggggagggacctttaaaagtgtg
agcgtgtgaattcaaatgccatcgcgtgtcccgctactttgatggctatc
tttttttcgtgaacataaaaagaatctgatattagcatgctacaaccatg
tctagacctactcatggggcaagactgtaaaggccaacattccctgtcga
gcacaaatgta
gaattcaacctggggtgcgatgtccaccagactgagcatgtgtaccgcgt
ctacgtggccacgtttcttgggtttggtggtaatgctgcccggcagaaat
atgaagaccgactatttgccaacacagttcagaaaaacaggtacagcccc
tgcggctcctcagcgggcacctgcaggcctagcttgctcctcatcaaaac
tagattcaggtcaagtacctgctttttagctgccccgtgctagaaggact
gaggggtcctcagggtcctgccagcagcccccgtcccacccgtgtatgtg
cttgcattttctctctccatctgatagaagggaccctcactgtcacttaa
acaacttagttgctcctgagtgactgggagcaaaggtgtggaaaagcaca
gacagtgacgacacactgctgacacaccccccatgttgtcttcccccccc
cccccccccggcggggcctgctccggggcgggaataaatccctgcacaac
atgaacccgaaactggtctctattttaagtgctaaggatgaggaacggtg
ggggaggggatttaaagtaaagaaataccctgaagtaattttaggataaa
aaaatatttttttgctggttctgatagtacttgcctgtagatcattact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_70082406_70083365
seq2: B6Ng01-331C01.b_43_1003 (reverse)

seq1  TACATTTGTGCTCTACAGGGAATGTTCGCCTATACAGTCTTGAACCCTGT  50
      ||||||||||||| |||||||||||| |||| ||||||||||  || || 
seq2  TACATTTGTGCTCGACAGGGAATGTTGGCCTTTACAGTCTTGCCCCATGA  50

seq1  GTCCATATAGAAATATATTTTGCATGCTAATATGAGATTATTTTTAGGTT  100
      ||   | |||| ||   | | |||||||||||| ||||| |||||| |||
seq2  GTAGGTCTAGACATGGTTGTAGCATGCTAATATCAGATTCTTTTTATGTT  100

seq1  AAC-ATTTAAAGTTAGCCTCCAAAGCAGTGGGTCCCACGATGGCATTTGT  149
       || |   |||| |||||  ||||| || ||| | | |||||||||||| 
seq2  CACGAAAAAAAGATAGCCATCAAAGTAGCGGGACACGCGATGGCATTTGA  150

seq1  ATTCACACGGTCACACTTTTAATGCTCCCT-CCCCCCGCTGCCACTGCAC  198
      ||||||||| |||||||||||| | ||||| |||||||||||||||||||
seq2  ATTCACACGCTCACACTTTTAAAGGTCCCTCCCCCCCGCTGCCACTGCAC  200

seq1  ATCTCCCTTGGGCCTCCTGTTTTACTTAGTATTTTTTGATATCTCTAGCA  248
      |||||| ||||||||| ||||||| |||||||||||||||||||||||||
seq2  ATCTCCATTGGGCCTCTTGTTTTAGTTAGTATTTTTTGATATCTCTAGCA  250

seq1  AGACAGGAGGTATGGAGAGAGGAACTCCAGGACTCAGAGTCATGAGACCT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGGAGGTATGGAGAGAGGAACTCCAGGACTCAGAGTCATGAGACCT  300

seq1  GGTGTAAGCCTGCTAATCCACTGACCAACAACAACCTGACAGTAAGGCCA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTAAGCCTGCTAATCCACTGACCAACAACAACCTGACAGTAAGGCCA  350

seq1  ACTGGGTCACATTGCCTGGGAGTTCTGGGCTCCCTTCCAGCTTGTCTGTG  398
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  ACTGGGTCACATTGCCTGGGAGTTCTGGGCTCCCTTCCAGCTTGTGTGTG  400

seq1  GCTGGGATGCAGGTGCTGCGAAGACAGGATCAGGACAGTAGAATAGAGGG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGGATGCAGGTGCTGCGAAGACAGGATCAGGACAGTAGAATAGAGGG  450

seq1  AAATCCTACAGCCAATCCCACCATGGCCCATGGATGCTCTCTGGACCTCC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCCTACAGCCAATCCCACCATGGCCCATGGATGCTCTCTGGACCTCC  500

seq1  TCTCTCCTTTTTTTCCTTTGCTCTTCTTGACTTGAATCGGATTCAGATAT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCCTTTTTTTCCTTTGCTCTTCTTGACTTGAATCGGATTCAGATAT  550

seq1  TTTGTTCTCGGTCTGGGCAAGTAGAGGACACTGCTTGCACATGGTTGGAA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTCTCGGTCTGGGCAAGTAGAGGACACTGCTTGCACATGGTTGGAA  600

seq1  AAGCAGCTGCCATTCCTTGCACCAGGAATCCCTCTTCTAGAGGTCCGCAA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGCTGCCATTCCTTGCACCAGGAATCCCTCTTCTAGAGGTCCGCAA  650

seq1  ACTTCTAATAGATCCTCTTCTCTGGACTCAAATAATCCATCTGTAACAGG  698
      |||| ||||||||||||||||||||||||||||||||||| |||||||||
seq2  ACTTATAATAGATCCTCTTCTCTGGACTCAAATAATCCATATGTAACAGG  700

seq1  AAATGTTTGCACTAGATTACTGCCTTTCAGAGCCAGGCCCTTGGACTGCG  748
      ||| ||||||||||||||||||||||||||||||||||||||||| || |
seq2  AAACGTTTGCACTAGATTACTGCCTTTCAGAGCCAGGCCCTTGGAGTGAG  750

seq1  TATCTGCCAGCACAGTGAGAACCTGGGCATGCTCAGTGCCAGAGCTGGCT  798
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGCCAGCACAGTGAGAACCTGGGCATGCTCAGTGCCAGAGCTGGCT  800

seq1  GCAGACTGTTGAACCCATATGCATTTCAGTAGGACCCCCAGAGGTCTGCA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGACTGTTGAACCCATATGCATTTCAGTAGGACCCCCAGAGGTCTGCA  850

seq1  CATCAGAGCCCACGGTGCTCCATCTAGGCTTCCATCCAGATCTAACACTG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAGAGCCCACGGTGCTCCATCTAGGCTTCCATCCAGATCTAACACTG  900

seq1  TAATGACGTCAGAGGCAGTTGCAGTCCCATTTGGCCCTTCCCGGTAACAG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGACGTCAGAGGCAGTTGCAGTCCCATTTGGCCCTTCCCGGTAACAG  950

seq1  GTCATTGAATTC  960
      |||| |||||||
seq2  GTCA-TGAATTC  961

seq1: chr14_69976906_69977556
seq2: B6Ng01-331C01.g_67_714

seq1  GAATTCAACCTGGGGTGCGATGTCCACCAGACTGAGCATGTGTACCGCGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACCTGGGGTGCGATGTCCACCAGACTGAGCATGTGTACCGCGT  50

seq1  CTACGTGGCCACGTTTCTTGGGTTTGGTGGTAATGCTGCCCGGCAGAGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  CTACGTGGCCACGTTTCTTGGGTTTGGTGGTAATGCTGCCCGGCAGAAAT  100

seq1  ATGAAGACCGACTATTTGCCAGCACAGTTCAGAAAAACAGGTACAGCCCC  150
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  ATGAAGACCGACTATTTGCCAACACAGTTCAGAAAAACAGGTACAGCCCC  150

seq1  TGCGGCTCCTCAGCGGGCACCTGCAGGCCTAGCTTGCTCCTCATCAAAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGGCTCCTCAGCGGGCACCTGCAGGCCTAGCTTGCTCCTCATCAAAAC  200

seq1  TAGATTCAGGTCAAGTACCTGCTTTTTAGCTGCCCCGTGCTAGAAGGACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATTCAGGTCAAGTACCTGCTTTTTAGCTGCCCCGTGCTAGAAGGACT  250

seq1  GAGGGGTCCTCAGGGTCCTGCCAGCAGCCCCCGTCCCACCCGTGTATGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGGTCCTCAGGGTCCTGCCAGCAGCCCCCGTCCCACCCGTGTATGTG  300

seq1  CTTGCATTTTCTCTCTCCATCTGATAGAGGGGACCCTCACTGTCACTTAG  350
      |||||||||||||||||||||||||||| |||||||||||||||||||| 
seq2  CTTGCATTTTCTCTCTCCATCTGATAGAAGGGACCCTCACTGTCACTTAA  350

seq1  ACGACTTAGTTGCTCCTGAGTGACTGGGAGCAAAGGTGTGGAAAAGCACA  400
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACTTAGTTGCTCCTGAGTGACTGGGAGCAAAGGTGTGGAAAAGCACA  400

seq1  GACAGTGACGACACACTGCTGACACACCCCCCACCCCACCCCCACCCCAC  450
      |||||||||||||||||||||||||||||||||      |  | |||| |
seq2  GACAGTGACGACACACTGCTGACACACCCCCCATGTTGTCTTC-CCCCCC  449

seq1  CCCCACCCCCCGCGAGGCTCACACCAGACGCTG--------CCCTTGACC  492
      |||| ||||| ||| |||   | || |  || |        ||||  || 
seq2  CCCCCCCCCCGGCGGGGCCTGCTCC-GGGGCGGGAATAAATCCCTGCACA  498

seq1  TCAAAAAGTCTCAAATAAGGAATGTTCTAGAGATACTGAGCACTGTCGCT  542
       ||  ||  | | ||     | || |||    ||  | ||  ||   | |
seq2  ACATGAA--CCCGAA-----ACTGGTCT--CTATTTTAAGTGCTAAGGAT  539

seq1  GAGAACCACAGTGAAAGGGGATTGAGAGTAAAGAAATACCTTGAAGTAAT  592
      ||| | |   | |  |||||||| | |||||||||||||| |||||||||
seq2  GAGGAACGGTGGGGGAGGGGATTTAAAGTAAAGAAATACCCTGAAGTAAT  589

seq1  TTTAGGATAATAAAATATTTTTAAGCTGGGTCTGATGGTACATGCCTGTA  642
      |||||||||| |||||||||||  ||||| |||||| |||| ||||||||
seq2  TTTAGGATAAAAAAATATTTTTTTGCTGGTTCTGATAGTACTTGCCTGTA  639

seq1  GATCATTAC  651
      |||||||||
seq2  GATCATTAC  648