BAC Information

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BAC

Clone NameB6Ng01-332H06
Chromosome14 (Build37)
Map Location 101,399,383 - 101,400,542
singlet/doubletsinglet
Overlap genenone
Upstream geneKlf12, LOC100043413, EG668683, EG668684
Downstream gene1700110M21Rik, LOC100043421, LOC382936, Tbc1d4, Commd6, Uchl3, Lmo7, LOC100043795, LOC545567
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-332H06.bB6Ng01-332H06.g
ACCGA118551GA118552
length1,2091,160
definitionB6Ng01-332H06.b B6Ng01-332H06.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaacaccccactctcatcagtggacagatcctggaaacagaaact
aaacagacacagtgtaactaacaaaagttatggaacaaatggatttaaca
gatatctatagaatattttatcctaaaacaaaagcatatacctttttctc
agcacctcacagtaccttctctaaaatagatcatgtaaacggtcactaat
caggcctcaacatatacaaaaatattgaaacaatcccatgcatcctatca
gattatcacagactaaggatgatcttcaataacaacataaataatagaga
gccaacatttatgtagaagctgaacaacactctactcaatgataacttgg
tcaatgaagaaataaagaaaggaattaaagactctttagagtttaatgaa
aacaaagccacaatatacccaaacttattggacacaatgaaagtaatgag
aattaagctcatagctcttagtgcctccaaaaagaatttggagagagcat
atattaacagcttgacagcacacctaaaagctctagaacaaaagaaagca
aattcacccaagaggagtagaaggcaagaaataatcaaattcagggccga
aatcaaccaagtggaaacaaaaagaactattaaaagaatcaaccaagtca
ggagctggttctttgagaaaatcaacaagatagataaacccttagccaga
ataactagaagtcacagggacagtatcctaattaacaaatcagaaatgaa
aagagagacataacaataaaatctgagaaaatccaaataatcatcagatc
cccatactcaaaaaaaaaccaaaaaaccctggatgaatggacaattttct
agacagatacaaggtaccaaatttaaatcagatcagattaatgatctaaa
cagtcccatattccaccgccacccaaaaatacaaacagtcattaatagtc
tcccactataaaaaaataaaagaaaaaaaaaggctcaggaccaccagatg
ggtttagtgcagagttctgtcagaccttcaagagactattcattcttcta
aactattccacaatagacgagattctctaccaatttcttctattgagcac
atactctgatacttaaccacccaagaccacaggaagagacttccatacac
tccatgactcgatgacggaatcctaataagtcctgcgaacggattccaga
aacactctc
gaattcacttttgatagtggtggttgttaacccagatatttgcagctgat
caaagtataaaagataggtatcagtgggttaccagtcatagatgtgacat
ctgtagcaatctcacctcaatggccagtgtaaggttcagaaaagggggaa
acaatcataagagggaggactgggagtaaaaccagtgggattctggatcc
gacaggatcacaacacacatgagctcccagcagctttaatttgcacaaga
cctgcccaaaatcaagctggtcaatatgctagcatgcagagagctctaat
tgaggagctattgacaattgatgatttgtgatgaggaagaggtcagcatt
tttaagagtatagccataagttcgaaactcttaagtatatgaccaaaaca
aattggactcagtgaagtaataaatgaaagaaaaagagaatgcaaaatta
ataggggtggatcaggaagggataagcaaaaatatattgcatgaaattct
caaaaaatgaattaaaatattgttcttaattaaacaataaatgtgtaaat
tactgtgatattacaacaaaggatcacaaaaccaaaattatgatttcttt
tctacatgcacttcctttctgcactttgattctttgtcattccctgcacc
actcatcctggcttcctcatgccaaaacgctaaaatactatatcctttaa
gggcaagaatcaaagtgttgtcatctgaagatcacatccatcttgagtta
ctagattccaaggagtagtaggaaatgagtttgagggatgcagcagttca
gaatagcaaaggaattttcatacatgtccacaccaccaaacaacttctca
caaagttaacagtaggctgtatgagtcaaaacatttcatttaaaaattaa
attttgcatgtgattaatctatcatctgggtctgattgcctggtggtata
ttttataattatgaattgagtgaagaataaaggataattcagatatatta
ggtggggttaaagcacaagggcattactcaggtttatatagcaataatgg
actcaggccaggacaatttcaggcattattgactgggctggagtatgacc
acggttagccaaggaccaatccactcttctagcctaattattatctggcg
aaatgccctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_101399383_101400542
seq2: B6Ng01-332H06.g_65_1224

seq1  GAATTCACTTTTGATAGTGGTGGTTGTTAACCCAGATATTTGCAGCTGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTTTGATAGTGGTGGTTGTTAACCCAGATATTTGCAGCTGAT  50

seq1  CAAAGTATAAAAGATAGGTATCAGTGGGTTACCAGTCATAGATGTGACAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGTATAAAAGATAGGTATCAGTGGGTTACCAGTCATAGATGTGACAT  100

seq1  CTGTAGCAATCTCACCTCAATGGCCAGTGTAAGGTTCAGAAAAGGGGGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAGCAATCTCACCTCAATGGCCAGTGTAAGGTTCAGAAAAGGGGGAA  150

seq1  ACAATCATAAGAGGGAGGACTGGGAGTAAAACCAGTGGGATTCTGGATCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATCATAAGAGGGAGGACTGGGAGTAAAACCAGTGGGATTCTGGATCC  200

seq1  GACAGGATCACAACACACATGAGCTCCCAGCAGCTTTAATTTGCACAAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGGATCACAACACACATGAGCTCCCAGCAGCTTTAATTTGCACAAGA  250

seq1  CCTGCCCAAAATCAAGCTGGTCAATATGCTAGCATGCAGAGAGCTCTAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCCCAAAATCAAGCTGGTCAATATGCTAGCATGCAGAGAGCTCTAAT  300

seq1  TGAGGAGCTATTGACAATTGATGATTTGTGATGAGGAAGAGGTCAGCATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGAGCTATTGACAATTGATGATTTGTGATGAGGAAGAGGTCAGCATT  350

seq1  TTTAAGAGTATAGCCATAAGTTCGAAACTCTTAAGTATATGACCAAAACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGAGTATAGCCATAAGTTCGAAACTCTTAAGTATATGACCAAAACA  400

seq1  AATTGGACTCAGTGAAGTAATAAATGAAAGAAAAAGAGAATGCAAAATTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGGACTCAGTGAAGTAATAAATGAAAGAAAAAGAGAATGCAAAATTA  450

seq1  ATAGGGGTGGATCAGGAAGGGATAAGCAAAAATATATTGCATGAAATTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGGGTGGATCAGGAAGGGATAAGCAAAAATATATTGCATGAAATTCT  500

seq1  CAAAAAATGAATTAAAATATTGTTCTTAATTAAACAATAAATGTGTAAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAATGAATTAAAATATTGTTCTTAATTAAACAATAAATGTGTAAAT  550

seq1  TACTGTGATATTACAACAAAGGATCACAAAACCAAAATTATGATTTCTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGTGATATTACAACAAAGGATCACAAAACCAAAATTATGATTTCTTT  600

seq1  TCTACATGCACTTCCTTTCTGCACTTTGATTCTTTGTCATTCCCTGCACC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACATGCACTTCCTTTCTGCACTTTGATTCTTTGTCATTCCCTGCACC  650

seq1  ACTCATCCTGGCTTCCTCATGCCAAAACGCTAAAATACTATATCCTTTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCATCCTGGCTTCCTCATGCCAAAACGCTAAAATACTATATCCTTTAA  700

seq1  GGGCAAGAATCAAAGTGTTGTCATCTGAAGATCACATCCATCTTGAGTTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAAGAATCAAAGTGTTGTCATCTGAAGATCACATCCATCTTGAGTTA  750

seq1  CTAGATTCCAAGGAGTAGTAGGAAATGAGTTTGAGGGATGCAGCAGTTCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGATTCCAAGGAGTAGTAGGAAATGAGTTTGAGGGATGCAGCAGTTCA  800

seq1  GAATAGCAAAGGAATTTTCATACATGTCCACACCACCAAACAACTTCTCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAGCAAAGGAATTTTCATACATGTCCACACCACCAAACAACTTCTCA  850

seq1  CAAAGTTAACAGTA-GCTGTATGAGTCAAAACATTTCATTTAAAAATTAA  899
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  CAAAGTTAACAGTAGGCTGTATGAGTCAAAACATTTCATTTAAAAATTAA  900

seq1  ATTTTGCATGTGATTAATCTATCATCT-GGTCTGATTGCCT-GTGGTATA  947
      ||||||||||||||||||||||||||| ||||||||||||| ||||||||
seq2  ATTTTGCATGTGATTAATCTATCATCTGGGTCTGATTGCCTGGTGGTATA  950

seq1  TTTTTATAATTATGAATTGAGTGAAGAATAAA-GATAATTCAGATAATAT  996
       ||||||||||||||||||||||||||||||| |||||||||||| ||||
seq2  -TTTTATAATTATGAATTGAGTGAAGAATAAAGGATAATTCAGAT-ATAT  998

seq1  TA-GTGGG--TAAAGCACAA-GGCATTAACTCA-GTTTATAATAGCAATA  1041
      || |||||  |||||||||| |||||| ||||| |||||| |||||||||
seq2  TAGGTGGGGTTAAAGCACAAGGGCATT-ACTCAGGTTTAT-ATAGCAATA  1046

seq1  ATGACCTCAGCCCAGGACATTTCCAGGCAATTAATGACT-GGCTGGAGTT  1090
      |||  ||||| |||||||| || ||||| |||| ||||| ||||||||| 
seq2  ATGGACTCAGGCCAGGACAATTTCAGGC-ATTATTGACTGGGCTGGAGT-  1094

seq1  AATGACCCACGTTTTAGCCAAGGACC-ATCAACTCCTTCTAG-CTAATTA  1138
       |||| |||||  ||||||||||||| ||| ||| ||||||| |||||||
seq2  -ATGA-CCACG-GTTAGCCAAGGACCAATCCACT-CTTCTAGCCTAATTA  1140

seq1  TTAATCTGCAGAAAATGCCCTC  1160
      || |||||  | ||||||||||
seq2  TT-ATCTGGCG-AAATGCCCTC  1160