BAC Information

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BAC

Clone NameB6Ng01-332M10
Chromosome14 (Build37)
Map Location 36,369,982 - 36,487,101
singlet/doubletdoublet
Overlap geneGrid1
Upstream geneLdb3, Opn4, 5830448L01Rik, Wapal, LOC100041341
Downstream gene4930596D02Rik, LOC100040277, LOC665933, 4930474N05Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-332M10.bB6Ng01-332M10.g
ACCGA118782GA118783
length1,1001,013
definitionB6Ng01-332M10.b B6Ng01-332M10.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(36,485,983 - 36,487,101)(36,369,982 - 36,371,007)
sequence
gaattcagctaatgggtaatcacactatgtccttgcctccatgcttgtaa
taaatccatgtgtcctttcacttgtttaatcttttttatgattagctaat
tgcgacaaacttgcagaaggctgagggaggtacaccccgataatcttcac
tgactgaggcaagctttcagtttattgatgaagtcactgtaaaagctgac
aggcaagaaagttctttgttaaaactagatatttatttcttttttttcac
tgatttacaatttatattaatcatgtattcatatttaaatatatgcccca
gtgagttatagctaaagttgaataattcattacaatctatatgctagcag
acaaagccatctcaaagcactgggtataaagaaagcaggctttctttcct
cgttttgctcattcatttttcaggagaggctgagtgctcaacttatgcca
gacatgttgtgggactgggaaacaccaaagcacaggatgagtcccgcctc
tgtctccacagaaatgtgcattgcaaggtcctcagacggagttggaacac
agctagacacaagaagcagaacctggccctgcaggatgatcagcctgtca
gaactgggcctaaggcagtgatctaataccagtcatgtgacagcctagaa
tttgctcagagtcaaggctacctccgaaggcctcttcctgtaatacagtc
ttccactgtttgattcaaattcaagcttacctgagcctgctggagaaggt
ggaggcattccaacagaaagatttgtcgttcagacaaggtttatcttggg
atacatgagcttcctgtcatttaaaatacataatcaaatctgatcttgct
taggatttttgggtaagatagtgttttgagcactgaagcctaactgattt
tctctctattaattccattaggaggattaataggtaataaaaattgggaa
agttttcattaagccccagttgctatcaagagtgaaaacagcttgaggat
ttctaaatatccatattttatccaagaggaattaagagcatgtcttctca
gaggcacagtgctgatacaacacgtcaatggtgtcccttgtagaatgttt

gaattcaaagatctgtagggacatttaggagccctgggacacggcaggga
ggtgactgtgttcatcttctatgtgaatgttgcacagttgagaacaggct
aaatccctacatctatgcattcttcttggagtcttaaaaacattccttat
tgaaagaaattactgccgataagaaattggtgttgtatcctagtgtgaca
gatttctgaagtggaatttcaggagtggaagatggaggaagcatgatcga
cacactgtctcaaagaaaccagagacatgacaggaccctgaggctggact
gaaaagctggatccaagagcaaagtgggaagaaaccctggcttggtgtgt
acatcactttttgcactgctgcaatcatagcatctgacataagcagcttg
aggaagggacattattctagccctcagtttcagggggttccattctatag
cagaggtggaatgacagtgtttaaactcattgatggagtcatgttctggt
tgccattcacatcacagtgggccagaaagtgaaaagcaagccaagagcca
gggcctgcatataaccttcaaaggctttctgtagtaacctatggctctgt
aaagggtcctgtcttgcaaaggtttcaaagtttcccaaaatggtaccact
ggctaggaaatagatattcaaagcacgtgtctagtggggacattttacat
tcaaacaaaacacttaaaggaaaagtggttataaaaggaactagagaaga
gtcttggttcctttggggttcagaacttgaaatacttaacgttaccaata
tgattaaacctagcttgtctacaaatagcatcaagtaagaaaggtagatt
tataattgttagaatgcatgtagaaaattggttctcacaggcagtggtgg
cacatatctttaattccagcacttggcagagcagagggcagagggcagag
gggcagagggcagagggcagagggcagagggcagagggcagagggcaggg
gcagaggcaaagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_36485983_36487101
seq2: B6Ng01-332M10.b_51_1150 (reverse)

seq1  AAACATTCTCACAAGGGAACACCCATTTGACCGTGTTGTATCAGCCAACT  50
      ||||||||| ||||||| |||||   |||| ||||||||||||||  |||
seq2  AAACATTCT-ACAAGGG-ACACC--ATTGA-CGTGTTGTATCAGC--ACT  43

seq1  GGTTGCCCTCCTGGAGAGACATGCCTCTTTATTTTCTCTTGGATAAAAAT  100
      |  ||||   |||   ||||||| ||| ||| || ||||||||| |||||
seq2  G--TGCC--TCTGAGAAGACATG-CTC-TTAATTCCTCTTGGAT-AAAAT  86

seq1  ATGGGATAATTTAGAAATCCCTCAAGCTTGTTTTTCACTCTTGATAGCAA  150
      || |||| |||||||||| |||||||||   |||||||||||||||||||
seq2  AT-GGAT-ATTTAGAAAT-CCTCAAGCT--GTTTTCACTCTTGATAGCAA  131

seq1  CTGGGGCTTAATGAAAACTTTCCCAATTTTTATTACCTATTAATCCTCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGGCTTAATGAAAACTTTCCCAATTTTTATTACCTATTAATCCTCCT  181

seq1  AATGGAATTAATAGAGAGAAAATCAGTTAGGCTTCAGTGCTCAAAACACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGAATTAATAGAGAGAAAATCAGTTAGGCTTCAGTGCTCAAAACACT  231

seq1  ATCTTACCCAAAAATCCTAAGCAAGATCAGATTTGATTATGTATTTTAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTACCCAAAAATCCTAAGCAAGATCAGATTTGATTATGTATTTTAAA  281

seq1  TGACAGGAAGCTCATGTATCCCAAGATAAACCTTGTCTGAACGACAAATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAGGAAGCTCATGTATCCCAAGATAAACCTTGTCTGAACGACAAATC  331

seq1  TTTCTGTTGGAATGCCTCCACCTTCTCCAGCAGGCTCAGGTAAGCTTGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGTTGGAATGCCTCCACCTTCTCCAGCAGGCTCAGGTAAGCTTGAA  381

seq1  TTTGAATCAAACAGTGGAAGACTGTATTACAGGAAGAGGCCTTCGGAGGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAATCAAACAGTGGAAGACTGTATTACAGGAAGAGGCCTTCGGAGGT  431

seq1  AGCCTTGACTCTGAGCAAATTCTAGGCTGTCACATGACTGGTATTAGATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTTGACTCTGAGCAAATTCTAGGCTGTCACATGACTGGTATTAGATC  481

seq1  ACTGCCTTAGGCCCAGTTCTGACAGGCTGATCATCCTGCAGGGCCAGGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCCTTAGGCCCAGTTCTGACAGGCTGATCATCCTGCAGGGCCAGGTT  531

seq1  CTGCTTCTTGTGTCTAGCTGTGTTCCAACTCCGTCTGAGGACCTTGCAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTCTTGTGTCTAGCTGTGTTCCAACTCCGTCTGAGGACCTTGCAAT  581

seq1  GCACATTTCTGTGGAGACAGAGGCGGGACTCATCCTGTGCTTTGGTGTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACATTTCTGTGGAGACAGAGGCGGGACTCATCCTGTGCTTTGGTGTTT  631

seq1  CCCAGTCCCACAACATGTCTGGCATAAGTTGAGCACTCAGCCTCTCCTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGTCCCACAACATGTCTGGCATAAGTTGAGCACTCAGCCTCTCCTGA  681

seq1  AAAATGAATGAGCAAAACGAGGAAAGAAAGCCTGCTTTCTTTATACCCAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGAATGAGCAAAACGAGGAAAGAAAGCCTGCTTTCTTTATACCCAG  731

seq1  TGCTTTGAGATGGCTTTGTCTGCTAGCATATAGATTGTAATGAATTATTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTGAGATGGCTTTGTCTGCTAGCATATAGATTGTAATGAATTATTC  781

seq1  AACTTTAGCTATAACTCACTGGGGCATATATTTAAATATGAATACATGAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTAGCTATAACTCACTGGGGCATATATTTAAATATGAATACATGAT  831

seq1  TAATATAAATTGTAAATCAGTGAAAAAAAAGAAATAAATATCTAGTTTTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATAAATTGTAAATCAGTGAAAAAAAAGAAATAAATATCTAGTTTTA  881

seq1  ACAAAGAACTTTCTTGCCTGTCAGCTTTTACAGTGACTTCATCAATAAAC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGAACTTTCTTGCCTGTCAGCTTTTACAGTGACTTCATCAATAAAC  931

seq1  TGAAAGCTTGCCTCAGTCAGTGAAGATTATCGGGGTGTACCTCCCTCAGC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGCTTGCCTCAGTCAGTGAAGATTATCGGGGTGTACCTCCCTCAGC  981

seq1  CTTCTGCAAGTTTGTCGCAATTAGCTAATCATAAAAAAGATTAAACAAGT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGCAAGTTTGTCGCAATTAGCTAATCATAAAAAAGATTAAACAAGT  1031

seq1  GAAAGGACACATGGATTTATTACAAGCATGGAGGCAAGGACATAGTGTGA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGACACATGGATTTATTACAAGCATGGAGGCAAGGACATAGTGTGA  1081

seq1  TTACCCATTAGCTGAATTC  1119
      |||||||||||||||||||
seq2  TTACCCATTAGCTGAATTC  1100

seq1: chr14_36369982_36371007
seq2: B6Ng01-332M10.g_68_1080

seq1  GAATTCAAAGATCTGTAGGGACATTTAGGAGCCCTGGGACACGGCAGGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAGATCTGTAGGGACATTTAGGAGCCCTGGGACACGGCAGGGA  50

seq1  GGTGACTGTGTTCATCTTCTATGTGAATGTTGCACAGTTGAGAACAGGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGACTGTGTTCATCTTCTATGTGAATGTTGCACAGTTGAGAACAGGCT  100

seq1  AAATCCCTACATCTATGCATTCTTCTTGGAGTCTTAAAAACATTCCTTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCCCTACATCTATGCATTCTTCTTGGAGTCTTAAAAACATTCCTTAT  150

seq1  TGAAAGAAATTACTGCCGATAAGAAATTGGTGTTGTATCCTAGTGTGACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGAAATTACTGCCGATAAGAAATTGGTGTTGTATCCTAGTGTGACA  200

seq1  GATTTCTGAAGTGGAATTTCAGGAGTGGAAGATGGAGGAAGCATGATCGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTCTGAAGTGGAATTTCAGGAGTGGAAGATGGAGGAAGCATGATCGA  250

seq1  CACACTGTCTCAAAGAAACCAGAGACATGACAGGACCCTGAGGCTGGACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTGTCTCAAAGAAACCAGAGACATGACAGGACCCTGAGGCTGGACT  300

seq1  GAAAAGCTGGATCCAAGAGCAAAGTGGGAAGAAACCCTGGCTTGGTGTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGCTGGATCCAAGAGCAAAGTGGGAAGAAACCCTGGCTTGGTGTGT  350

seq1  ACATCACTTTTTGCACTGCTGCAATCATAGCATCTGACATAAGCAGCTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCACTTTTTGCACTGCTGCAATCATAGCATCTGACATAAGCAGCTTG  400

seq1  AGGAAGGGACATTATTCTAGCCCTCAGTTTCAGGGGGTTCCATTCTATAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGGGACATTATTCTAGCCCTCAGTTTCAGGGGGTTCCATTCTATAG  450

seq1  CAGAGGTGGAATGACAGTGTTTAAACTCATTGATGGAGTCATGTTCTGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGTGGAATGACAGTGTTTAAACTCATTGATGGAGTCATGTTCTGGT  500

seq1  TGCCATTCACATCACAGTGGGCCAGAAAGTGAAAAGCAAGCCAAGAGCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCATTCACATCACAGTGGGCCAGAAAGTGAAAAGCAAGCCAAGAGCCA  550

seq1  GGGCCTGCATATAACCTTCAAAGGCTTTCTGTAGTAACCTATGGCTCTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCTGCATATAACCTTCAAAGGCTTTCTGTAGTAACCTATGGCTCTGT  600

seq1  AAAGGGTCCTGTCTTGCAAAGGTTTCAAAGTTTCCCAAAATGGTACCACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGGTCCTGTCTTGCAAAGGTTTCAAAGTTTCCCAAAATGGTACCACT  650

seq1  GGCTAGGAAATAGATATTCAAAGCACGTGTCTAGTGGGGACATTTTACAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTAGGAAATAGATATTCAAAGCACGTGTCTAGTGGGGACATTTTACAT  700

seq1  TCAAACAAAACACTTAAAGGAAAAGTGGTTATAAAAGGAACTAGAGAAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAACAAAACACTTAAAGGAAAAGTGGTTATAAAAGGAACTAGAGAAGA  750

seq1  GTCTTGGTTCCTTTGGGGTTCAGGAACTTGAAATACTTAACGTTACCAAT  800
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  GTCTTGGTTCCTTTGGGGTTCA-GAACTTGAAATACTTAACGTTACCAAT  799

seq1  ATGATTAAACCTAGCTTGTCTACAAATAGCATCAAGTAAG-AAGGTAGAT  849
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  ATGATTAAACCTAGCTTGTCTACAAATAGCATCAAGTAAGAAAGGTAGAT  849

seq1  TTATAATTGTTAGAATGCATGTAGAAAATTGGTTCTCACAGGCAGTGGTG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAATTGTTAGAATGCATGTAGAAAATTGGTTCTCACAGGCAGTGGTG  899

seq1  GCACATATCTTTAATTCCAGCACTTGGCAGAGGCAGAGGGGCAGAGGGGC  949
      ||||||||||||||||||||||||||||||| ||||| ||||||| ||||
seq2  GCACATATCTTTAATTCCAGCACTTGGCAGA-GCAGA-GGGCAGA-GGGC  946

seq1  AGAGGGGCAGAGGGGCAGAGGGGCAGAGGGGCAGAGGGGCAGAGGGGCAG  999
      ||||||||||| ||||||| ||||||| ||||||| ||||||| ||||||
seq2  AGAGGGGCAGA-GGGCAGA-GGGCAGA-GGGCAGA-GGGCAGA-GGGCAG  991

seq1  AGGGGCAGGGGGGCAGAGGGGCAAAGG  1026
      | |||||  ||||||||  ||||||||
seq2  A-GGGCA--GGGGCAGA--GGCAAAGG  1013