BAC Information

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BAC

Clone NameB6Ng01-333P06
Chromosome14 (Build37)
Map Location 22,002,995 - 22,142,548
singlet/doubletdoublet
Overlap geneAdk
Upstream geneLOC100039106, Kcnk16, Nudt13, Ecd, AA536717, Dnajc9, Mrps16, Ttc18, Anxa7, Zmynd17, Ppp3cb, Usp54, Myoz1, Synpo2l, Sec24c, Fut11, Chchd1, 2310021P13Rik, Ndst2, Camk2g, Plau, EG620119, Vcl, Ap3m1
Downstream geneMyst4, EG435391, Dusp13, Samd8, Vdac2, Comtd1, Zfp503, 1700112E06Rik, EG665075
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-333P06.bB6Ng01-333P06.g
ACCGA119579GA119580
length1,146757
definitionB6Ng01-333P06.b B6Ng01-333P06.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(22,141,395 - 22,142,548)(22,002,995 - 22,003,641)
sequence
gaattccagggaaggctgtgggacagacaagtggtggactcttgtgtctg
aaccctggagtaagtgggtgggaagtattttgggggagaaagaaagatta
ttcaactttaggagacaatatacttctaagacatgctataacatggacaa
actttgaaaacattatgggaaataagctgaggatgttagataattatcaa
atgaagctaattgtatgaggtacttagtatgtgcaagctcttgatgacac
acaaaacaagtggccaccaaggctgggaagacagaatatgggtggagcta
ttatttaatatgaatggagcttctgcttgcggggaagggaaaactgcaaa
tggaccatgggaaggggtgtgcagcactgccaacacactaacagtgaact
gtacgctgcaaagtggacgggatgctcagctctgctccttcctgccttcc
atgctgtctgcctttccagacaggagtgtgtagtatagtccaggctgacc
aagaacggctgattttgtttctacctgccaaatacccggagtacaggcct
ctggggctgtagccaggccagcatggcactaaccgagctgcatttggagt
tcctgttaagtacttcttactacaaaacaataaagagagtaagtcacatc
agaatactggatcaatggtggccctatttttcttaggatgtatctaatta
tttccaaacattcatttttcttgcctttgaaacaggaactcatgttccct
gggttggcttcaaacttttgatccttctacctctgccttccaattgctag
atgcacaagcacacatcctttccttcactagcttatgaattcaactgtca
gtcagaattgaagagtgactgctagaaggttggaaactctgtcaaatgca
gggacttactctacttatcgtttgtttataatttttttgagacaagagtt
gtagtaagtaacctcaggctggctggaatccttctgtgtaacccttggtg
tgtctgaaacaagtctgtctttcctgtaagtgcagactgcagctgagcgg
ccacaacacgcttcttttctgctctcttccactcacaaacaccagctttt
cagaaccctaaatcaactcagtccccagatcaaattcctgtatgga
gaattcactttgtagaccaggctggactcgaactcagaagttcgcctgcc
tctgcctcccaagtgctgggattaaaggcatgcgccaccactgccccaga
aaagagtttttaagaattgaatgaaattaaatagacaacacatcaaacct
tggcaggcagtattgagacctaatgcaataaaagcttcctacagtgaata
cataaaggagatctaaaggaaattgccagataacggcaagacaggcttaa
ctggccatctcttgtcaaaccctggtattgcaaatgaagcttgcaatacc
agggttacgttacatctaattgagttgtcagccaaaggggtatcatggca
gtccccaaataacccaaggtcttctcaagattgtgcattgcttttcacaa
attgagacagggcccattgctgaagataacacattacttattgagcatgg
agaagttgggccggtacctacatagagccttcacccctatgtctgctaca
ggaagtgctctgaatgccaccaaaagagaaacaaacaccaagctcagcac
aaccctttggatctacattaatatccagtctgcaagatatacgagggcaa
tattgacacaaagcctgtgggagtatccaccaggctctggttggttgatt
tgacttagggccccctccaggaaatcgaatccataacctatactgattgg
gtgttcaggaacctgagagtagataacccggggatctagggtaaaaccaa
atactac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_22141395_22142548
seq2: B6Ng01-333P06.b_51_1196 (reverse)

seq1  TCCATACAGAATATTTGATCTGGGGGAACTGAGTTGGAATTTTAGGGGTC  50
      ||||||||| | |||||||||||||  |||||||||  ||||   |||| 
seq2  TCCATACAGGA-ATTTGATCTGGGG--ACTGAGTTG--ATTT--AGGGTT  43

seq1  CTGAAAAGCTGGTGTTTGTGAGT-GAAGAGGAGCAGAAAAGGAAGCCGTG  99
      ||||||||||||||||||||||| ||||| |||||||||| |||| ||||
seq2  CTGAAAAGCTGGTGTTTGTGAGTGGAAGA-GAGCAGAAAA-GAAG-CGTG  90

seq1  -TGTGGCGGCTCAGGCCTGCAGTCCTGCACTTACAAGGAAGACAGACTTG  148
       |||||| ||||||  ||||||| ||||||||||| | ||||||||||||
seq2  TTGTGGCCGCTCAG--CTGCAGT-CTGCACTTACAGGAAAGACAGACTTG  137

seq1  TTTCAGACACACC-AGGGTTACACAGAAGG-TTCCAGCCAGCCTG-GGTT  195
      ||||||||||||| |||||||||||||||| |||||||||||||| ||||
seq2  TTTCAGACACACCAAGGGTTACACAGAAGGATTCCAGCCAGCCTGAGGTT  187

seq1  ACTTACTACAACTCTTGTCTCAAAAAAATTATAAACAAACGATAAAGTAG  245
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  ACTTACTACAACTCTTGTCTCAAAAAAATTATAAACAAACGAT-AAGTAG  236

seq1  AGTAAGTCCCTGCATTTGACAGAGTTTCCAACCTTCTAGCAGTCACTCTT  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAGTCCCTGCATTTGACAGAGTTTCCAACCTTCTAGCAGTCACTCTT  286

seq1  CAATTCTGACTGACAGTTGAATTCATAAGCTAGTGAAGG-AAGGATGTGT  344
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  CAATTCTGACTGACAGTTGAATTCATAAGCTAGTGAAGGAAAGGATGTGT  336

seq1  GCTTGTGCATCTAGCAATTGGAAGGCAGAGGTAGAAGGATCAAAAGTTTG  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGTGCATCTAGCAATTGGAAGGCAGAGGTAGAAGGATCAAAAGTTTG  386

seq1  AAGCCAACCCAGGGAACATGAGTTCCTGTTTCAAAGGCAAGAAAAATGAA  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCAACCCAGGGAACATGAGTTCCTGTTTCAAAGGCAAGAAAAATGAA  436

seq1  TGTTTGGAAATAATTAGATACATCCTAAGAAAAATAGGGCCACCATTGAT  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGGAAATAATTAGATACATCCTAAGAAAAATAGGGCCACCATTGAT  486

seq1  CCAGTATTCTGATGTGACTTACTCTCTTTATTGTTTTGTAGTAAGAAGTA  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTATTCTGATGTGACTTACTCTCTTTATTGTTTTGTAGTAAGAAGTA  536

seq1  CTTAACAGGAACTCCAAATGCAGCTCGGTTAGTGCCATGCTGGCCTGGCT  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAACAGGAACTCCAAATGCAGCTCGGTTAGTGCCATGCTGGCCTGGCT  586

seq1  ACAGCCCCAGAGGCCTGTACTCCGGGTATTTGGCAGGTAGAAACAAAATC  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCCCCAGAGGCCTGTACTCCGGGTATTTGGCAGGTAGAAACAAAATC  636

seq1  AGCCGTTCTTGGTCAGCCTGGACTATACTACACACTCCTGTCTGGAAAGG  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCGTTCTTGGTCAGCCTGGACTATACTACACACTCCTGTCTGGAAAGG  686

seq1  CAGACAGCATGGAAGGCAGGAAGGAGCAGAGCTGAGCATCCCGTCCACTT  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACAGCATGGAAGGCAGGAAGGAGCAGAGCTGAGCATCCCGTCCACTT  736

seq1  TGCAGCGTACAGTTCACTGTTAGTGTGTTGGCAGTGCTGCACACCCCTTC  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGCGTACAGTTCACTGTTAGTGTGTTGGCAGTGCTGCACACCCCTTC  786

seq1  CCATGGTCCATTTGCAGTTTTCCCTTCCCCGCAAGCAGAAGCTCCATTCA  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGGTCCATTTGCAGTTTTCCCTTCCCCGCAAGCAGAAGCTCCATTCA  836

seq1  TATTAAATAATAGCTCCACCCATATTCTGTCTTCCCAGCCTTGGTGGCCA  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAAATAATAGCTCCACCCATATTCTGTCTTCCCAGCCTTGGTGGCCA  886

seq1  CTTGTTTTGTGTGTCATCAAGAGCTTGCACATACTAAGTACCTCATACAA  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTTTTGTGTGTCATCAAGAGCTTGCACATACTAAGTACCTCATACAA  936

seq1  TTAGCTTCATTTGATAATTATCTAACATCCTCAGCTTATTTCCCATAATG  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCTTCATTTGATAATTATCTAACATCCTCAGCTTATTTCCCATAATG  986

seq1  TTTTCAAAGTTTGTCCATGTTATAGCATGTCTTAGAAGTATATTGTCTCC  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCAAAGTTTGTCCATGTTATAGCATGTCTTAGAAGTATATTGTCTCC  1036

seq1  TAAAGTTGAATAATCTTTCTTTCTCCCCCAAAATACTTCCCACCCACTTA  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGTTGAATAATCTTTCTTTCTCCCCCAAAATACTTCCCACCCACTTA  1086

seq1  CTCCAGGGTTCAGACACAAGAGTCCACCACTTGTCTGTCCCACAGCCTTC  1144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGGGTTCAGACACAAGAGTCCACCACTTGTCTGTCCCACAGCCTTC  1136

seq1  CCTGGAATTC  1154
      ||||||||||
seq2  CCTGGAATTC  1146

seq1: chr14_22002995_22003641
seq2: B6Ng01-333P06.g_66_712

seq1  GAATTCACTTTGTAGACCAGGCTGGACTCGAACTCAGAAGTTCGCCTGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTTGTAGACCAGGCTGGACTCGAACTCAGAAGTTCGCCTGCC  50

seq1  TCTGCCTCCCAAGTGCTGGGATTAAAGGCATGCGCCACCACTGCCCCAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCTCCCAAGTGCTGGGATTAAAGGCATGCGCCACCACTGCCCCAGA  100

seq1  AAAGAGTTTTTAAGAATTGAATGAAATTAAATAGACAACACATCAAACCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGTTTTTAAGAATTGAATGAAATTAAATAGACAACACATCAAACCT  150

seq1  TGGCAGGCAGTATTGAGACCTAATGCAATAAAAGCTTCCTACAGTGAATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAGGCAGTATTGAGACCTAATGCAATAAAAGCTTCCTACAGTGAATA  200

seq1  CATAAAGGAGATCTAAAGGAAATTGCCAGATAACGGCAAGACAGGCTTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAAGGAGATCTAAAGGAAATTGCCAGATAACGGCAAGACAGGCTTAA  250

seq1  CTGGCCATCTCTTGTCAAACCCTGGTATTGCAAATGAAGCTTGCAATACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCCATCTCTTGTCAAACCCTGGTATTGCAAATGAAGCTTGCAATACC  300

seq1  AGGGTTACGTTACATCTAATTGAGTTGTCAGCCAAAGGGGTATCATGGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTTACGTTACATCTAATTGAGTTGTCAGCCAAAGGGGTATCATGGCA  350

seq1  GTCCCCAAATAACCCAAGGTCTTCTCAAGATTGTGCATTGCTTTTCACAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCCAAATAACCCAAGGTCTTCTCAAGATTGTGCATTGCTTTTCACAA  400

seq1  ATTGAGACAGGGCCCATTGCTGAAGATAACACATTACTTATTGAGCATGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAGACAGGGCCCATTGCTGAAGATAACACATTACTTATTGAGCATGG  450

seq1  AGAAGTTGGGCCGGTACCTACATAGAGCCTTCACCCCTATGTCTGCTACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTTGGGCCGGTACCTACATAGAGCCTTCACCCCTATGTCTGCTACA  500

seq1  GGAAGTGCTCTGAATGCCACCAAAAGAGAAACAAACACCAAGCTCAGCAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGTGCTCTGAATGCCACCAAAAGAGAAACAAACACCAAGCTCAGCAC  550

seq1  AACCCTTTGGATCTACATTAATATCCAGTCTGCAAGATATACGAGGGCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCTTTGGATCTACATTAATATCCAGTCTGCAAGATATACGAGGGCAA  600

seq1  TATTGACACAAAGCCTGTGGGAGTATCCACCAGGCTCTGGTTGGTTG  647
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGACACAAAGCCTGTGGGAGTATCCACCAGGCTCTGGTTGGTTG  647