BAC Information

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BAC

Clone NameB6Ng01-334P05
Chromosome14 (Build37)
Map Location 28,253,786 - 28,398,577
singlet/doubletdoublet
Overlap geneCcdc66, LOC665370
Upstream geneSlmap, LOC100039353, LOC665279, A630054L15Rik, Arf4, E430028B21Rik, 4921531P07Rik, Dnahc7c, Asb14, Appl1, Hesx1, Il17rd, LOC665333, Arhgef3, LOC100040147
Downstream geneErc2, LOC100040206, Wnt5a, LOC100040218
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-334P05.bB6Ng01-334P05.g
ACCGA120327GA120328
length1,037566
definitionB6Ng01-334P05.b B6Ng01-334P05.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(28,397,543 - 28,398,577)(28,253,786 - 28,254,357)
sequence
gaattctaatgacaagatccgactttctgtatttattgcccccattttac
ttcctcatctgacttaagacagcatgcttctgtgctttttagaacctttt
cagtgtttgtatcaatttctctggggggttcccgagcttaggtgatttcc
tttttgacattttcatgctctgactgagagaaagccttgtctgtggcttt
gaagactgatataacccctgaccatgcatttctacattttcatttcacag
tttgggcctatgagaagtaaaagactaaacctacaatatgtaatagtatc
gcagaacactctgggcttctgcgtccccctctctagacacattgcccttc
cggtccagaagctgctacagaagaaagtgtccttaactcctgggcctgct
cacccactgtgtgcacctcctcccaggaaggaaaggattactatagactg
aatgtacgtccttagattcatgcactgacttctggccacctgtgtggtgg
catttgggagtggatccctagggagatggttaggtgatgagaatggagcc
ctaatcaatgttatcaatcaagtttataagaagaggtcagagagctaacc
atctcttgttcaaccacataaggtattaaaaagtgggagtctgaacctta
aagaggaccatgtccagaactcaactgtgtgaccattgtcatcttgggct
tacaaatttcaaaaactgtaagaaataaattctagctgcttttcagcttt
gcagtctaccatactttgttgtagcaatctaatcaactaaggcagggagg
gaacacacagacgtccactgttgctcccctcagcatcctttcccttaaca
tggcagaactgactgatagcggtctccacacaccatcagttcataagtcc
acatagcccagaagtgctcgtgtgaagtgagcaagaccaattaggtgttc
tcttcttagattcagaaccattaaccataaaatacaaagtcaaaagaaat
gttgttgtatgatctttcccaacagcgtgccctgatg
tccagcagaatagtatgagctcttaaccactgacccatctcactagctct
tgtttgtttgtttgtttgtttgtttgtttgttttggggggggatgcaggg
ggtgacttgctatgcatttcaggttgtctttccttgaacttagaggcatc
ttgctgccagtcttttggggttatagacattccctgtaacctaacgtttt
tattaatgtataagtagaacaaataattcagaagggcaaattatgttttg
taatttctttttcaaatgtaattattgtttctctgatcatgtctgttttt
ttcccctagaataaaaacttttttttttttaaatgaaaacaagactctct
tatataatgttgattctatgtttttttaaaaatgttttgcttgaggctag
agaggtggttcagacattaaggcacttgcttgctcttcaagaggacttga
gttcagtttctagcaactgactatattggtcagctcacaaagcacctcta
agtcagctccagagaatctattgcccccttctggtgttttaagcactgcc
acacacaagtacataa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_28397543_28398577
seq2: B6Ng01-334P05.b_50_1086 (reverse)

seq1  CATCAGGGCACGCTGTTGGG-AAGATCATACAAC-ACATTTCTTTTGACT  48
      |||||||||||||||||||| ||||||||||||| |||||||||||||||
seq2  CATCAGGGCACGCTGTTGGGAAAGATCATACAACAACATTTCTTTTGACT  50

seq1  TTGTATTTTATGGTTAATGGTTCTGATTCTAAGAAGAGAACACCTAATTG  98
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TTGTATTTTATGGTTAATGGTTCTGAATCTAAGAAGAGAACACCTAATTG  100

seq1  GTCTTGCTCACTTCACACGAGCACTTCTGGGCTATGTGGACTTATG-ACT  147
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  GTCTTGCTCACTTCACACGAGCACTTCTGGGCTATGTGGACTTATGAACT  150

seq1  GATGGTGTGTGGAGACCGCTATCAGTCAGTTCTGCCATGTTTAAGGGAAA  197
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  GATGGTGTGTGGAGACCGCTATCAGTCAGTTCTGCCATG-TTAAGGGAAA  199

seq1  GGATGCTGAGGGGAGCAACAGTGGACGTCTGTGTGTTCCCTCCCTGCCTT  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGCTGAGGGGAGCAACAGTGGACGTCTGTGTGTTCCCTCCCTGCCTT  249

seq1  AGTTGATTAGATTGCTACAACAAAGTATGGTAGACTGCAAAGCTGAAAAG  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGATTAGATTGCTACAACAAAGTATGGTAGACTGCAAAGCTGAAAAG  299

seq1  CAGCTAGAATTTATTTCTTACAGTTTTTG-AATTTGTAAGCCCAAGATGA  346
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  CAGCTAGAATTTATTTCTTACAGTTTTTGAAATTTGTAAGCCCAAGATGA  349

seq1  CAATGGTCACACAGTTGAGTTCTGGACATGGTCCTCTTTAAGGTTTCAGA  396
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  CAATGGTCACACAGTTGAGTTCTGGACATGGTCCTCTTTAAGG-TTCAGA  398

seq1  CTCCCACTTTTTAATACCTTATGTGGTTGAACAAGAGATGGTTAGCTCTC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCACTTTTTAATACCTTATGTGGTTGAACAAGAGATGGTTAGCTCTC  448

seq1  TGACCTCTTCTTATAAACTTGATTGATAACATTGATTAGGGCTCCATTCT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCTCTTCTTATAAACTTGATTGATAACATTGATTAGGGCTCCATTCT  498

seq1  CATCACCTAACCATCTCCCTAGGGATCCACTCCCAAATGCCACCACACAG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCACCTAACCATCTCCCTAGGGATCCACTCCCAAATGCCACCACACAG  548

seq1  GTGGCCAGAAGTCAGTGCATGAATCTAAGGACGTACATTCAGTCTATAGT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCCAGAAGTCAGTGCATGAATCTAAGGACGTACATTCAGTCTATAGT  598

seq1  AATCCTTTCCTTCCTGGGAGGAGGTGCACACAGTGGGTGAGCAGGCCCAG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCTTTCCTTCCTGGGAGGAGGTGCACACAGTGGGTGAGCAGGCCCAG  648

seq1  GAGTTAAGGACACTTTCTTCTGTAGCAGCTTCTGGACCGGAAGGGCAATG  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTAAGGACACTTTCTTCTGTAGCAGCTTCTGGACCGGAAGGGCAATG  698

seq1  TGTCTAGAGAGGGGGACGCAGAAGCCCAGAGTGTTCTGCGATACTATTAC  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTAGAGAGGGGGACGCAGAAGCCCAGAGTGTTCTGCGATACTATTAC  748

seq1  ATATTGTAGGTTTAGTCTTTTACTTCTCATAGGCCCAAACTGTGAAATGA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTGTAGGTTTAGTCTTTTACTTCTCATAGGCCCAAACTGTGAAATGA  798

seq1  AAATGTAGAAATGCATGGTCAGGGGTTATATCAGTCTTCAAAGCCACAGA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTAGAAATGCATGGTCAGGGGTTATATCAGTCTTCAAAGCCACAGA  848

seq1  CAAGGCTTTCTCTCAGTCAGAGCATGAAAATGTCAAAAAGGAAATCACCT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGCTTTCTCTCAGTCAGAGCATGAAAATGTCAAAAAGGAAATCACCT  898

seq1  AAGCTCGGGAACCCCCCAGAGAAATTGATACAAACACTGAAAAGGTTCTA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTCGGGAACCCCCCAGAGAAATTGATACAAACACTGAAAAGGTTCTA  948

seq1  AAAAGCACAGAAGCATGCTGTCTTAAGTCAGATGAGGAAGTAAAATGGGG  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCACAGAAGCATGCTGTCTTAAGTCAGATGAGGAAGTAAAATGGGG  998

seq1  GCAATAAATACAGAAAGTCGGATCTTGTCATTAGAATTC  1035
      |||||||||||||||||||||||||||||||||||||||
seq2  GCAATAAATACAGAAAGTCGGATCTTGTCATTAGAATTC  1037

seq1: chr14_28253786_28254357
seq2: B6Ng01-334P05.g_66_637

seq1  GAATTCTCCAGCAGAATAGTATGAGCTCTTAACCACTGACCCATCTCACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCAGCAGAATAGTATGAGCTCTTAACCACTGACCCATCTCACT  50

seq1  AGCTCTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTTGGGGGGGGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTTGGGGGGGGAT  100

seq1  GCAGGGGGTGACTTGCTATGCATTTCAGGTTGTCTTTCCTTGAACTTAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGGGGTGACTTGCTATGCATTTCAGGTTGTCTTTCCTTGAACTTAGA  150

seq1  GGCATCTTGCTGCCAGTCTTTTGGGGTTATAGACATTCCCTGTAACCTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATCTTGCTGCCAGTCTTTTGGGGTTATAGACATTCCCTGTAACCTAA  200

seq1  CGTTTTTATTAATGTATAAGTAGAACAAATAATTCAGAAGGGCAAATTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTTTTATTAATGTATAAGTAGAACAAATAATTCAGAAGGGCAAATTAT  250

seq1  GTTTTGTAATTTCTTTTTCAAATGTAATTATTGTTTCTCTGATCATGTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGTAATTTCTTTTTCAAATGTAATTATTGTTTCTCTGATCATGTCT  300

seq1  GTTTTTTTCCCCTAGAATAAAAACTTTTTTTTTTTTAAATGAAAACAAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTTTCCCCTAGAATAAAAACTTTTTTTTTTTTAAATGAAAACAAGA  350

seq1  CTCTCTTATATAATGTTGATTCTATGTTTTTTTAAAAATGTTTTGCTTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTTATATAATGTTGATTCTATGTTTTTTTAAAAATGTTTTGCTTGA  400

seq1  GGCTAGAGAGGTGGTTCAGACATTAAGGCACTTGC-TGCTCTTCAAGAGG  449
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  GGCTAGAGAGGTGGTTCAGACATTAAGGCACTTGCTTGCTCTTCAAGAGG  450

seq1  ACTTGAGTTCAGTTTCTAGCAACTGACTATATTGGTCAGCTCACAAAGCA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGAGTTCAGTTTCTAGCAACTGACTATATTGGTCAGCTCACAAAGCA  500

seq1  CCTCTAAGTCAGCTCCAGAGAATCTATTGCCCCCTTCTGGTGTTTCAGAG  549
      ||||||||||||||||||||||||||||||||||||||||||||| | ||
seq2  CCTCTAAGTCAGCTCCAGAGAATCTATTGCCCCCTTCTGGTGTTTTA-AG  549

seq1  CACTGCCACACACAAGTACATAA  572
      |||||||||||||||||||||||
seq2  CACTGCCACACACAAGTACATAA  572