BAC Information

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BAC

Clone NameB6Ng01-336B05
Chromosome14 (Build37)
Map Location 21,967,460 - 22,099,523
singlet/doubletdoublet
Overlap geneAdk
Upstream geneKcnk5, LOC100039106, Kcnk16, Nudt13, Ecd, AA536717, Dnajc9, Mrps16, Ttc18, Anxa7, Zmynd17, Ppp3cb, Usp54, Myoz1, Synpo2l, Sec24c, Fut11, Chchd1, 2310021P13Rik, Ndst2, Camk2g, Plau, EG620119, Vcl, Ap3m1
Downstream geneMyst4, EG435391, Dusp13, Samd8, Vdac2, Comtd1, Zfp503, 1700112E06Rik, EG665075
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-336B05.bB6Ng01-336B05.g
ACCGA121115GA121116
length1,1531,141
definitionB6Ng01-336B05.b B6Ng01-336B05.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(22,098,357 - 22,099,523)(21,967,460 - 21,968,603)
sequence
gaattctctttatatgcagattttaaaaatagatttatttttatttatgg
gtatgcatgtctgtgtgagtggccctgttttccctggagtcagaatgaca
gtaacaacagtaagcagataaatgagcctgataaatgttctgggaaccaa
acttgcatcctctacaagagcaccaagggctcttaaagtttgagctatct
ctccaatcccctgagttttaaactgtctatagcaaaataaataaataaat
aaataaataaataaataaataaatgagtgaatgaaagaaagaaagacagg
gaaaagaaagaaaggcagaaaggcagaaaggcagaaaggcagaaagaaag
aaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagacagac
aggaagaaagaaagaaagagaaagaaagaaagaaagaaagaaagaaagaa
aggcagaaagagagaaagagagagagagagagagagagagagagagagag
agagagagagagagagagagagaatggtcgtgtagggagcaggatgtctc
attaggtaatgatatctataactaagtgtgatgagtgtaaagaatcacat
cctacaaactgtcttatgacttctggaactgttccatggcatatgcatat
tccccgcaaataattaataaaaaatttaggaatgtaaaaaagtcattact
gtaatcattatttctgatactgagttaactattctgacatttacttcttt
acaaagaattaattacatccatttatatgaattctgtccctacctaattt
aggagtattaatttacgcccagtactactaaattttaatttctgacaaat
ggaaggaaatacctatgtagtaagtcattccagtagctggccacatagtc
gtctctccgcccacctctcttcctgatttgttgaccaaaatggatcaggt
catcagataaaaatgaatgtcaaagctggatgtcaactcacgaaagggct
tcatttatatctctactcatatttcagagaacagaaatgacactcatctt
tcatgttagcattgtcatgtaccacaacattcaatagacgctgtcagtgc
ctcccaagaaagaacaggttagcaattgacacttggtgcttgcttttagt
ctc
gaattcaatattcttcacatgcatccgtatgtaaaccgcttcctagattg
tctcctttttccctctctctctctctctctctctctctctctctctctct
ttctttctttctttctttctttcttagtgtgttctttaaacaatttggcc
aattgtggccattgtaactatttctattgacagggcttcactgaatgccc
ctggcactttccagttccaaggaggaaccaaaatgcggatgataggtctt
gccctggttgttgactaacagtttctcatcttcctgtttctattttctta
gtgtcaaaagaaagtcataatattgctggcctcagcagggtctcaagaaa
ggaattattcattctggtagtgatggctaagttaacttgccttacagtaa
gagcatgggtcagtgtagatagtggcaagtcagctgcaggcctcagatct
cccactgaattactggaggcaaagtgatttgccagaattatacatctaat
agctaccaacatagccacatgaagtagctgctatgattcttttttttttt
atcttttctttttatttatttatttatttttagatattttctttatatac
atttcaaatgctgctgctatgattcttgtaagcttctcagatgagaaaca
agaggcgctgcatttgttcacagtcacttgtctgggtatcaaagaggtga
ggtttcagtgtaggtcaccctttatcctaaacctcagtgtaagtactgct
ggagttgtacatgggagtgtgtggatacagtcattcaaaatagatctagg
tgagaagagacaagctaggggtcaaggaaatctacatttaaaggttaggc
cagaagaacaagaaataaagaaacgagaaataggagaaccaggtgggcac
tatgtctttattaactaagttatgtatgtaaatgacaaatgaattactga
ctcagtggaaaacaaaactataagtaatttcatgtgttatatgaatctat
ttttttataaattaaataaaaacagtttgcatttaaatttatctggattt
agaaatacattatgtcagaacattgatatttttctggaatgactgcctcc
ccctcctattttttttctcttagattttaatttttatttaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_22098357_22099523
seq2: B6Ng01-336B05.b_44_1196 (reverse)

seq1  GAGACTAAAAAGCAGAGCACCAGTGTGTCATTTGCTAA-CTGTTCTTTCC  49
      |||||| ||||||| |||||||  |||||| ||||||| |||||||||| 
seq2  GAGACT-AAAAGCA-AGCACCA-AGTGTCAATTGCTAACCTGTTCTTTCT  47

seq1  TGGGGAGCACTGACAGCGTCTATTGAATGGTTGTGGGTACAATGACAATT  99
      ||||  |||||||||||||||||||||| ||||| ||||| ||||||| |
seq2  TGGGAGGCACTGACAGCGTCTATTGAAT-GTTGT-GGTAC-ATGACAA-T  93

seq1  GCTAACAATGAAAGATGAGTGTCATTTCTGTTCTCTGAAATATGAGTAAG  149
      |||||| |||||||||||||||||||||||||||||||||||||||||  
seq2  GCTAAC-ATGAAAGATGAGTGTCATTTCTGTTCTCTGAAATATGAGTA--  140

seq1  AAGATATAAATGAAGCCCTTTCCTGAGTTGACATCCAGCTTTGACATTCA  199
       ||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  GAGATATAAATGAAGCCCTTTCGTGAGTTGACATCCAGCTTTGACATTCA  190

seq1  TTTTTATCTGATGACCTGATCCATTTTGGTCAACAAATCAGGAAGAGAGG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTATCTGATGACCTGATCCATTTTGGTCAACAAATCAGGAAGAGAGG  240

seq1  TGGGCGGAGAGACGACTATGTGGCCAGCCTACTGGAATGACTTACTACAT  299
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  TGGGCGGAGAGACGACTATGTGGCCAG-CTACTGGAATGACTTACTACAT  289

seq1  AGGTATTTCCTTCCATTTGTCAGAAATTAAAATTTAGTAGTACTGGGCGT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTATTTCCTTCCATTTGTCAGAAATTAAAATTTAGTAGTACTGGGCGT  339

seq1  AAATTAATACTCCTAAATTAGGTAGGGACAGAATTCATATAAATGGATGT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTAATACTCCTAAATTAGGTAGGGACAGAATTCATATAAATGGATGT  389

seq1  AATTAATTCTTTGTAAAGAAGTAAATGTCAGAATAGTTAACTCAGTATCA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAATTCTTTGTAAAGAAGTAAATGTCAGAATAGTTAACTCAGTATCA  439

seq1  GAAATAATGATTACAGTAATGACTTTTTTACATTCCTAAATTTTTTATTA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATAATGATTACAGTAATGACTTTTTTACATTCCTAAATTTTTTATTA  489

seq1  ATTATTTGCGGGGAATATGCATATGCCATGGAACAGTTCCAGAAGTCATA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTTGCGGGGAATATGCATATGCCATGGAACAGTTCCAGAAGTCATA  539

seq1  AGACAGTTTGTAGGATGTGATTCTTTACACTCATCACACTTAGTTATAGA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGTTTGTAGGATGTGATTCTTTACACTCATCACACTTAGTTATAGA  589

seq1  TATCATTACCTAATGAGACATCCTGCTCCCTACACGACCATTCTCTCTCT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCATTACCTAATGAGACATCCTGCTCCCTACACGACCATTCTCTCTCT  639

seq1  CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTT  689

seq1  CTCTCTTTCTGCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT  749
      ||||||||||||    ||||||||||||||||||||||||||||||||||
seq2  CTCTCTTTCTGC----CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT  735

seq1  CTTTCTTTCTTTCTTCCTGTCTGTCTTTCTTTCTTTCTTTCTTTCTTTCT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTTTCTTTCTTCCTGTCTGTCTTTCTTTCTTTCTTTCTTTCTTTCT  785

seq1  TTCTTTCTTTCTTTCTTTCTTTCTTTCTGCCTTTCTGCCTTTCTGCCTTT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTCTTTCTTTCTTTCTTTCTTTCTGCCTTTCTGCCTTTCTGCCTTT  835

seq1  CTGCCTTTCTTTCTTTTCCCTGTCTTTCTTTCTTTCATTCACTCATTTAT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTTTCTTTCTTTTCCCTGTCTTTCTTTCTTTCATTCACTCATTTAT  885

seq1  TTATTTATTTATTTATTTATTTATTTATTTATTTTGCTATAGACAGTTTA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTATTTATTTATTTATTTATTTATTTATTTTGCTATAGACAGTTTA  935

seq1  AAACTCAGGGGATTGGAGAGATAGCTCAAACTTTAAGAGCCCTTGGTGCT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTCAGGGGATTGGAGAGATAGCTCAAACTTTAAGAGCCCTTGGTGCT  985

seq1  CTTGTAGAGGATGCAAGTTTGGTTCCCAGAACATTTATCAGGCTCATTTA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTAGAGGATGCAAGTTTGGTTCCCAGAACATTTATCAGGCTCATTTA  1035

seq1  TCTGCTTACTGTTGTTACTGTCATTCTGACTCCAGGGAAAACAGGGCCAC  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTTACTGTTGTTACTGTCATTCTGACTCCAGGGAAAACAGGGCCAC  1085

seq1  TCACACAGACATGCATACCCATAAATAAAAATAAATCTATTTTTAAAATC  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACACAGACATGCATACCCATAAATAAAAATAAATCTATTTTTAAAATC  1135

seq1  TGCATATAAAGAGAATTC  1167
      ||||||||||||||||||
seq2  TGCATATAAAGAGAATTC  1153

seq1: chr14_21967460_21968603
seq2: B6Ng01-336B05.g_65_1205

seq1  GAATTCAATATTCTTCACATGCATCCGTATGTAAACCGCTTCCTAGATTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATATTCTTCACATGCATCCGTATGTAAACCGCTTCCTAGATTG  50

seq1  TCTCCTTTTTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTTTTTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT  100

seq1  TTCTTTCTTTCTTTCTTTCTTTCTTAGTGTGTTCTTTAAACAATTTGGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTCTTTCTTTCTTTCTTTCTTAGTGTGTTCTTTAAACAATTTGGCC  150

seq1  AATTGTGGCCATTGTAACTATTTCTATTGACAGGGCTTCACTGAATGCCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGTGGCCATTGTAACTATTTCTATTGACAGGGCTTCACTGAATGCCC  200

seq1  CTGGCACTTTCCAGTTCCAAGGAGGAACCAAAATGCGGATGATAGGTCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCACTTTCCAGTTCCAAGGAGGAACCAAAATGCGGATGATAGGTCTT  250

seq1  GCCCTGGTTGTTGACTAACAGTTTCTCATCTTCCTGTTTCTATTTTCTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTGGTTGTTGACTAACAGTTTCTCATCTTCCTGTTTCTATTTTCTTA  300

seq1  GTGTCAAAAGAAAGTCATAATATTGCTGGCCTCAGCAGGGTCTCAAGAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCAAAAGAAAGTCATAATATTGCTGGCCTCAGCAGGGTCTCAAGAAA  350

seq1  GGAATTATTCATTCTGGTAGTGATGGCTAAGTTAACTTGCCTTACAGTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATTATTCATTCTGGTAGTGATGGCTAAGTTAACTTGCCTTACAGTAA  400

seq1  GAGCATGGGTCAGTGTAGATAGTGGCAAGTCAGCTGCAGGCCTCAGATCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCATGGGTCAGTGTAGATAGTGGCAAGTCAGCTGCAGGCCTCAGATCT  450

seq1  CCCACTGAATTACTGGAGGCAAAGTGATTTGCCAGAATTATACATCTAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACTGAATTACTGGAGGCAAAGTGATTTGCCAGAATTATACATCTAAT  500

seq1  AGCTACCAACATAGCCACATGAAGTAGCTGCTATGATTCTTTTTTTTTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTACCAACATAGCCACATGAAGTAGCTGCTATGATTCTTTTTTTTTTT  550

seq1  ATCTTTTCTTTTTATTTATTTATTTATTTTTAGATATTTTCTTTATATAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTTCTTTTTATTTATTTATTTATTTTTAGATATTTTCTTTATATAC  600

seq1  ATTTCAAATGCTGCTGCTATGATTCTTGTAAGCTTCTCAGATGAGAAACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCAAATGCTGCTGCTATGATTCTTGTAAGCTTCTCAGATGAGAAACA  650

seq1  AGAGGCGCTGCATTTGTTCACAGTCACTTGTCTGGGTATCAAAGAGGTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGCGCTGCATTTGTTCACAGTCACTTGTCTGGGTATCAAAGAGGTGA  700

seq1  GGTTTCAGTGTAGGTCACCCTTTATCCTAAACCTCAGTGTAAGTACTGCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTCAGTGTAGGTCACCCTTTATCCTAAACCTCAGTGTAAGTACTGCT  750

seq1  GGAGTTGTACATGGGAGTGTGTGGATACAGTCATTCAAAATAGATCTAGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTTGTACATGGGAGTGTGTGGATACAGTCATTCAAAATAGATCTAGG  800

seq1  TGAGAAGAGACAAGCTAGGGGTCAAGGAAATCTACATTTAAAGGTTAGGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAAGAGACAAGCTAGGGGTCAAGGAAATCTACATTTAAAGGTTAGGC  850

seq1  CAGAAGAACAAGAAATAAAGAAACGAGAAATAGGAGAACCAGGTGGGCAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGAACAAGAAATAAAGAAACGAGAAATAGGAGAACCAGGTGGGCAC  900

seq1  TATGTC-TTATTAACTAAGTTATGTATGTAAATGACAAATGAATTACTGA  949
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTCTTTATTAACTAAGTTATGTATGTAAATGACAAATGAATTACTGA  950

seq1  CTCAGTGGAAAACAAAACTATAAAAGTAAATTCATGTGTTATATGAATCT  999
      |||||||||||||||||||||  |||||| ||||||||||||||||||||
seq2  CTCAGTGGAAAACAAAACTAT--AAGTAATTTCATGTGTTATATGAATCT  998

seq1  ATTTTTTATAAAATTTAAATAAAAACAGTTTGCATTTAAAATTTATCT-G  1048
      ||||||| || || ||||||||||||||||||||||| |||||||||| |
seq2  ATTTTTT-TATAAATTAAATAAAAACAGTTTGCATTT-AAATTTATCTGG  1046

seq1  ATTTAGAAATACATTATGTCAG-ACATTGATA-TTTTCTGG-ATGACTGC  1095
      |||||||||||||||||||||| ||||||||| |||||||| ||||||||
seq2  ATTTAGAAATACATTATGTCAGAACATTGATATTTTTCTGGAATGACTGC  1096

seq1  CT-CCCCTCCTATTTTTTTTTTCTTTCTTAGATTTTATTTTTTAATTTAA  1144
      || ||||||||||||||||    | |||||||||||| ||||| ||||||
seq2  CTCCCCCTCCTATTTTTTT----TCTCTTAGATTTTAATTTTT-ATTTAA  1141