BAC Information

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BAC

Clone NameB6Ng01-336O01
Chromosome14 (Build37)
Map Location 80,499,501 - 80,500,030
singlet/doubletsinglet
Overlap genenone
Upstream gene1300010F03Rik, LOC100043765, AU017455, 1190002H23Rik, Narg1l, Mtrf1, Kbtbd7, EG432879, Wbp4, Elf1, LOC668560, Sugt1, Lect1, Pcdh8, EG629734, Olfm4
Downstream geneLOC672828
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-336O01.bB6Ng01-336O01.g
ACCGA121670GA121671
length1,0171,161
definitionB6Ng01-336O01.b B6Ng01-336O01.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcaactgaggaatactgaatggctgagaagcacctgaaaaaatg
ttcaacatccttaatcatcaggaaatgcaaatcaagacaaccctgagatt
ccatctcacaccagtcagaatggctaagaccaaaaattcaggtgacagca
gatgctggcgaggatgtggagaaagaggaacactcctccattgttggtgg
gattgcaggcttgtacaaccactctggaaatcagtctggcggttcctcag
aaaattggacatagtactaccggaggatccagcaatacctcttctgggca
tatatccagaagatgtcccaaccggtatgaaggacacatgctccactatg
ttcatagcagccttatttataatagccagaagctggaaagaacccagatg
tccttcaacagaggaatggatacagaaaatgtggtacatttacacaatgg
agtactactcagctattaaaaagaatgaatttatgaaattcctagccaaa
tggatggacctggagggtatcatcctgagtgaggtaaccgaatcacaaaa
gaacacacatgatatgtactcactgataagtagatattagcccagaagct
tagaatacccaagatacaatttgcaaaacacatgaaactcaaggcgaagg
aagaccaaagtgtggatacttcgttccttcttagaatggggaataaaata
cccatggaaggagttacagagacaaatttcagaactgagatgaaggaagg
accatccagatactgcccaaccagggaatttatcttatatataaccacca
aacccagacactattgcatatgccagaaagcttttctgacaggaccctta
cataggtatctcttgtgaggctatgccagtgcctggcaaatacagaaagg
gtatgctcacagtcatctattggggactttgtggatagcgtttgaaatgt
aagtgaagaaaatatctaataaaaaggaaaaaaccaaagtgcatgttagt
ttaatatttaagtgtaa
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaaaaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagaaacaaagtatggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcttccaaatgctgacaccattgcatacactagcaagattttactgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggccctagcaaa
cacagaagtggatgctcacagtcagctaatggatggatccacagggctcc
caatggaggagctagagaaagtactcaaggagctaaagggaatcttcacc
ctataggtgaacacattatgaactaaccagtacccctgagcctcttgact
tctagctgcatatgtatcaaagatggtcttagtcgcatcactgagagaag
gtccattgaccaccgactttgtggccccggtacagtgttacttctagtga
tctcataggtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_80499501_80500030
seq2: B6Ng01-336O01.b_201_723 (reverse)

seq1  CAAAGTGTCCACACTTTGGTCTTCGTTCTTCTTGAGTTTCATATGTTTTG  50
      | |||| ||||||||||||||||| |||  |||||||||||| |||||||
seq2  CGAAGTATCCACACTTTGGTCTTCCTTCGCCTTGAGTTTCATGTGTTTTG  50

seq1  CAAGTTGTAACTTATGTCTTGGTTATTCTAAGTTTCTGGGCTAATATCCA  100
      ||| |||||       |||||| ||||||||| ||||||||||||||| |
seq2  CAAATTGTA-------TCTTGGGTATTCTAAGCTTCTGGGCTAATATCTA  93

seq1  CTTATCAATGAGTACATATCATGTGAGTTCTTTTGTGATTGGGTTACCTC  150
      ||||||| ||||||||||||||||| |||||||||||||| |||||||||
seq2  CTTATCAGTGAGTACATATCATGTGTGTTCTTTTGTGATTCGGTTACCTC  143

seq1  ACTCAGGATGATACCCTCCAGATCCATCTATTTGCCTAGGAATTTCATAA  200
      ||||||||||||||||||||| |||||| ||||| |||||||||||||||
seq2  ACTCAGGATGATACCCTCCAGGTCCATCCATTTGGCTAGGAATTTCATAA  193

seq1  ATTCATTCTTTTTAATAGCTGAGTATTACTCCATTGTGTAAATGTACCAC  250
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  ATTCATTCTTTTTAATAGCTGAGTAGTACTCCATTGTGTAAATGTACCAC  243

seq1  ATTTTTTGTATCCATTCCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGCT  300
      ||||| |||||||||||||||||||| || ||||||||||||||||||||
seq2  ATTTTCTGTATCCATTCCTCTGTTGAAGGACATCTGGGTTCTTTCCAGCT  293

seq1  TCTGGCTATTATAAATAAGGCTGCTATGAACATAGTGGAGCATGTTTCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TCTGGCTATTATAAATAAGGCTGCTATGAACATAGTGGAGCATGTGTCCT  343

seq1  TCTTATCGGTTGGAACATCTTCTGGATATATGCCCAGGAGAGGTATTGTG  400
      || || ||||||| ||||||||||||||||||||||| ||||||||||  
seq2  TCATACCGGTTGGGACATCTTCTGGATATATGCCCAGAAGAGGTATTGCT  393

seq1  GGATCCTCTGGTAGTACTATGTCCAATTTTCTGAGGAACTGCCAGACTGA  450
      |||||||| |||||||||||||||||||||||||||||| ||||||||||
seq2  GGATCCTCCGGTAGTACTATGTCCAATTTTCTGAGGAACCGCCAGACTGA  443

seq1  TTTCCAGAGTGGTTGTACAAGCTTGCAATCCCACCAATAATGGAGGAGTG  500
      |||||||||||||||||||||| |||||||||||||| ||||||||||||
seq2  TTTCCAGAGTGGTTGTACAAGCCTGCAATCCCACCAACAATGGAGGAGTG  493

seq1  TTCCTCTTTCTCCACATCCTCACCAGCATC  530
      ||||||||||||||||||||| ||||||||
seq2  TTCCTCTTTCTCCACATCCTCGCCAGCATC  523