BAC Information

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BAC

Clone NameB6Ng01-338P23
Chromosome14 (Build37)
Map Location 102,279,049 - 102,280,189
singlet/doubletsinglet
Overlap geneLmo7
Upstream gene1700110M21Rik, LOC100043421, LOC382936, Tbc1d4, Commd6, Uchl3
Downstream geneLOC100043795, LOC545567, LOC669278
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-338P23.bB6Ng01-338P23.g
ACCGA123119GA123120
length1,1351,124
definitionB6Ng01-338P23.b B6Ng01-338P23.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaggtaacacacctcaatcttatgttctcagtgtctatttcttaa
aaagtaaaaatgtttctctgtctagctttaatttgtactctaaaaagctc
atcaatatccattgtcatttaatattgaatctttttcctaatggtctctc
aactattttttaaaagttaaaacatgatttaatcaatgattctgtagctg
tgattagttaaatcactttgtgcttctggaaggttgtgtgagaatgaaag
acacactcacgagcgtgcgtgcgcgcgcgcgcgcacacacacacacacac
acacacacacacacacacacacacacacaccagttaattttaatatgcct
ttaggaggcctgattgccagcatcttatatctaggttttataatgagtaa
aaataaataaattctgtaatgtacatactcactgatctttataataacaa
aattctttttttttctttttttgacggttgatggggttataaaatgtcat
tcttaacttatgtttaacacaaagcaccccagatatttcctggagagaat
aagacatcctaaagatttgtctacctttgaggtgtcaacattaaaatatt
tttctttgatttctttcatcccccctcccattctctgtctatctcctctc
tctctacaccccccccccacacacaccactgaccagcatttcaaggctac
tgtaattttgttttattagtattttcatcttatgttttggttatacaact
ttgttaataattttaggtattttcttattatatgaaatttcgaatacccc
cttattatacagtttgtggagaaaaaaaagatatacttttcatgggtttt
gttttcttcttcttttggtgaacaggaaaaccctgtcaacttacccttct
tattaatcagagcttttgcatccctgcaacttcatgtccattttctgatc
ttgtaccatgttccttcaggcacttgagattccagctgctgaaaagaagt
ggccgggacagtgcctacggggacatctggtgtcctgacagaggagaatt
ttctgctcctcagtagcacagaaggaaagattcttgagaagcttggactc
gcttgggtttcagaatctctgaacaagctgtcctc

gaattcagtgctaaaaccatctggacctgagccttttctgtttgggagac
gtttaatgactgcttctatttccttagggattataggactatttaaatag
tttgcctaatcttgattcaactttggtacatagtatctgtctagaaaaat
catccatttcatttagattctccaattttgtggagtacaggcttttgaag
taagacctaatgattttttttgaactccctcagtatccgttgttatgtct
cccttttcattactgattctgtttatttggatacatctctctgccttata
gttagtttggctaagggtttgtctgtcttattgatttcctcaaagaatct
gctcttggttttactgattttttttgtatgttttcattgtttctaataga
ttgatttcagccctgagttgtttatttcctgctgttgactcctcttgggt
atgtttgcttcttttgtttctagagctctcaggtgtaattttaagatgct
agtatgagaaatctattatttctttatgaaggcacttaggctatgaattt
tcttcttagcattgctttcattgagtcccataagtttggatatgtggtgc
cttcactttgattgaattccagaaagtcttcaatttctctttttgttttt
ttctcttaccctgagatcattgagtggagagttgttcaatatccattagt
gtgtaggctttctgctgtttctgttgttgttgaagtcctgccttcatctg
tgatggtctggtaggatacaaggagttatttcaactttcttgtctgtgtt
gaggcttgcttttgtgaccaagtatatagtcaattttggagaaggttcca
tgaggtgctgtgaagaaagtatattcttctgggtgtgagtgaaacgttct
atagatagctgttaggtccatttgatgcataacctctgttagtttcatgt
ttctctgtttagtttctgtcttgatgacctgtcattggtggagaggtgtg
gtggttgaatctcaccactaatatgtggggggtccattggcgataatagc
ttacctaatgttcctttacaaaattagtgggtgtctccttggttgggcgg
cataatgattcaataatgagtaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_102279049_102280189
seq2: B6Ng01-338P23.b_46_1180

seq1  GAATTCAGGTAACACACCTCAATCTTATGTTCTCAGTGTCTATTTCTTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGTAACACACCTCAATCTTATGTTCTCAGTGTCTATTTCTTAA  50

seq1  AAAGTAAAAATGTTTCTCTGTCTAGCTTTAATTTGTACTCTAAAAAGCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTAAAAATGTTTCTCTGTCTAGCTTTAATTTGTACTCTAAAAAGCTC  100

seq1  ATCAATATCCATTGTCATTTAATATTGAATCTTTTTCCTAATGGTCTCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAATATCCATTGTCATTTAATATTGAATCTTTTTCCTAATGGTCTCTC  150

seq1  AACTATTTTTTAAAAGTTAAAACATGATTTAATCAATGATTCTGTAGCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTATTTTTTAAAAGTTAAAACATGATTTAATCAATGATTCTGTAGCTG  200

seq1  TGATTAGTTAAATCACTTTGTGCTTCTGGAAGGTTGTGTGAGAATGAAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTAGTTAAATCACTTTGTGCTTCTGGAAGGTTGTGTGAGAATGAAAG  250

seq1  ACACACTCACGAGCGTGCGTGCGCGCGCGCGCGCACACACACACACACAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACTCACGAGCGTGCGTGCGCGCGCGCGCGCACACACACACACACAC  300

seq1  ACACACACACACACACACACACACACACACCAGTTAATTTTAATATGCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACACACACACCAGTTAATTTTAATATGCCT  350

seq1  TTAGGAGGCCTGATTGCCAGCATCTTATATCTAGGTTTTATAATGAGTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGAGGCCTGATTGCCAGCATCTTATATCTAGGTTTTATAATGAGTAA  400

seq1  AAATAAATAAATTCTGTAATGTACATACTCACTGATCTTTATAATAACAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAATAAATTCTGTAATGTACATACTCACTGATCTTTATAATAACAA  450

seq1  AATTCTTTTTTTTTCTTTTTTTGACGGTTGATGGGGTTATAAAATGTCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTTTTTTTTTCTTTTTTTGACGGTTGATGGGGTTATAAAATGTCAT  500

seq1  TCTTAACTTATGTTTAACACAAAGCACCCCAGATATTTCCTGGAGAGAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAACTTATGTTTAACACAAAGCACCCCAGATATTTCCTGGAGAGAAT  550

seq1  AAGACATCCTAAAGATTTGTCTACCTTTGAGGTGTCAACATTAAAATATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACATCCTAAAGATTTGTCTACCTTTGAGGTGTCAACATTAAAATATT  600

seq1  TTTCTTTGATTTCTTTCATCCCCCCTCCCATTCTCTGTCTATCTCCTCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTGATTTCTTTCATCCCCCCTCCCATTCTCTGTCTATCTCCTCTC  650

seq1  TCTCTACACCCCCCCCCCACACACACCACTGACCAGCATTTCAAGGCTAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTACACCCCCCCCCCACACACACCACTGACCAGCATTTCAAGGCTAC  700

seq1  TGTAATTTTGTTTTATTAGTATTTTCATCTTATGTTTTGGTTATACAACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATTTTGTTTTATTAGTATTTTCATCTTATGTTTTGGTTATACAACT  750

seq1  TTGTTAATAATTTTAGGTATTTTCTTATTATATGAAATTTCGAATACCCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTAATAATTTTAGGTATTTTCTTATTATATGAAATTTCGAATACCCC  800

seq1  CTTATTATACAGTTTGTGGAGAAAAAAAAGATATACTTTTCATGGGTTTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTATACAGTTTGTGGAGAAAAAAAAGATATACTTTTCATGGGTTTT  850

seq1  GTTTTCTTCTTCTTTTGGTGAACAGGAAAACCCTGTCAACTTACCCTTCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCTTCTTCTTTTGGTGAACAGGAAAACCCTGTCAACTTACCCTTCT  900

seq1  TATTAATCAGAGCTTTTGCATCCCTGCAACTTCATGTCCATTTTCTGATC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAATCAGAGCTTTTGCATCCCTGCAACTTCATGTCCATTTTCTGATC  950

seq1  TTTGTACCATGTTTCCTTCAGGCACTTGAAGATTCCAGCTGCCTGAAAAG  1000
       |||||||||| |||||||||||||||| |||||||||||| ||||||||
seq2  -TTGTACCATG-TTCCTTCAGGCACTTG-AGATTCCAGCTG-CTGAAAAG  996

seq1  AAGTGGCCGGGACAGTGGCTACGGGGACATCTGGTGTCCTGACAGAGGAG  1050
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  AAGTGGCCGGGACAGTGCCTACGGGGACATCTGGTGTCCTGACAGAGGAG  1046

seq1  AATTTCCTGCCCCTCCAGGTAGCCACAGAAGGGAAGATTCCTTTGAG-AG  1099
      ||||| |||| ||||   |||| ||||||||| |||||||  ||||| ||
seq2  AATTTTCTGCTCCTC--AGTAG-CACAGAAGGAAAGATTC--TTGAGAAG  1091

seq1  CTTGGACTCGC-TGGGGTCCAG-ATCTCTG-ACCAGCTGTTCCTC  1141
      ||||||||||| |||| | ||| ||||||| || ||||| |||||
seq2  CTTGGACTCGCTTGGGTTTCAGAATCTCTGAACAAGCTG-TCCTC  1135


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