BAC Information

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BAC

Clone NameB6Ng01-339B15
Chromosome14 (Build37)
Map Location 97,862,333 - 97,995,983
singlet/doubletdoublet
Overlap genenone
Upstream geneKlhl1, LOC100043366, LOC668654
Downstream geneEG668659, Dach1, LOC635593
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-339B15.bB6Ng01-339B15.g
ACCGA123190GA123191
length1,197277
definitionB6Ng01-339B15.b B6Ng01-339B15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(97,862,333 - 97,863,519)(97,995,707 - 97,995,983)
sequence
gaattctatatcaagagagtgaaacaatgtctcagccaagagttcaaggg
aagataggctccatagcagcctggccttcaaaaagaagaatcaacacatt
tctttcttatatttactgtaaaatgttataatatatgatatggtatggta
tagatgaatagaaaaacaaaataataaaaatgtttacattatatttctaa
ataatataaggacaaagtcatagggtagtttgtatgagtgactcatattt
ttctttattttgaatctatgtaaaataattgacacaaactgtaccatcta
gttctcagagatagtaatgatgtgatttctacaaatacagaggagtcttt
caggttgaggggcaaaaaattttttttcctatgtgcccatgtgtgttcat
gctttggagaaaggaaaataaaatgtactatgtatgtgcttcaatgtatc
tccttataataatattttttctaaattttatttttgattatttgtttact
catttgtgagattgcagtctagtatttaattacaatatttgaaataaaaa
tattttaattcctttgttgtcctccctcccccaagcccttttatataact
ctcattcttcaaattcatggcctatttttattcattaatttttttgcatg
tatgtatttgaatgcacacatatacagaaatatttacatattctaaaata
taaactgctgagtcaatataatgttatttatatgggtattttgagggctt
gccatttgcacttgacagcatactcgaatgctctttcctggggagtattg
ctttaatttacccattctaattcagtatttatttacctgaaatagagaca
atataaaaatcatgaaatattaacaaaatgtgttaattggtatatgttgc
ctttctatatatgtagttgagtaggaactcaaataaatgggaggttgtaa
ataaaatttgcttgtaatcatcattcaaatcgacagagttcctcattgtt
tatcataatctatattcttttggaaattcgtcaataattctacattcctg
ttacatcaaattttaaaaacatatacaatatttattaaactttattatct
taattgaaacttgactaacttatactagtagaaaaagcctatctggttgc
ttgaattcacaggtatgggttgacatcatgttttaggaacacatcat

ctcctgttaattaaaactgagaaggaatcctcactggcatttttactttg
tattggaagaaaataattttttagttaatttgaaattattaggaagggta
aaacattatatgattcagttagttctagtaggtatataaaaatcatagat
attaccttttcttttgcaaaatggaggtacataagctttttcttataatt
atatatatatgtagatagatagatagatagatagatagatagatagatag
atagatagatagatagatgagtagatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_97862333_97863519
seq2: B6Ng01-339B15.b_47_1243

seq1  GAATTCTATATCAAGAGAGTGAAACAATGTCTCAGCCAAGAGTTCAAGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATATCAAGAGAGTGAAACAATGTCTCAGCCAAGAGTTCAAGGG  50

seq1  AAGATAGGCTCCATAGCAGCCTGGCCTTCAAAAAGAAGAATCAACACATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATAGGCTCCATAGCAGCCTGGCCTTCAAAAAGAAGAATCAACACATT  100

seq1  TCTTTCTTATATTTACTGTAAAATGTTATAATATATGATATGGTATGGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTTATATTTACTGTAAAATGTTATAATATATGATATGGTATGGTA  150

seq1  TAGATGAATAGAAAAACAAAATAATAAAAATGTTTACATTATATTTCTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATGAATAGAAAAACAAAATAATAAAAATGTTTACATTATATTTCTAA  200

seq1  ATAATATAAGGACAAAGTCATAGGGTAGTTTGTATGAGTGACTCATATTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATATAAGGACAAAGTCATAGGGTAGTTTGTATGAGTGACTCATATTT  250

seq1  TTCTTTATTTTGAATCTATGTAAAATAATTGACACAAACTGTACCATCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTATTTTGAATCTATGTAAAATAATTGACACAAACTGTACCATCTA  300

seq1  GTTCTCAGAGATAGTAATGATGTGATTTCTACAAATACAGAGGAGTCTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTCAGAGATAGTAATGATGTGATTTCTACAAATACAGAGGAGTCTTT  350

seq1  CAGGTTGAGGGGCAAAAAATTTTTTTTCCTATGTGCCCATGTGTGTTCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTTGAGGGGCAAAAAATTTTTTTTCCTATGTGCCCATGTGTGTTCAT  400

seq1  GCTTTGGAGAAAGGAAAATAAAATGTACTATGTATGTGCTTCAATGTATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTGGAGAAAGGAAAATAAAATGTACTATGTATGTGCTTCAATGTATC  450

seq1  TCCTTATAATAATATTTTTTCTAAATTTTATTTTTGATTATTTGTTTACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTATAATAATATTTTTTCTAAATTTTATTTTTGATTATTTGTTTACT  500

seq1  CATTTGTGAGATTGCAGTCTAGTATTTAATTACAATATTTGAAATAAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGTGAGATTGCAGTCTAGTATTTAATTACAATATTTGAAATAAAAA  550

seq1  TATTTTAATTCCTTTGTTGTCCTCCCTCCCCCAAGCCCTTTTATATAACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTAATTCCTTTGTTGTCCTCCCTCCCCCAAGCCCTTTTATATAACT  600

seq1  CTCATTCTTCAAATTCATGGCCTATTTTTATTCATTAATTTTTTTGCATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATTCTTCAAATTCATGGCCTATTTTTATTCATTAATTTTTTTGCATG  650

seq1  TATGTATTTGAATGCACACATATACAGAAATATTTACATATTCTAAAATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTATTTGAATGCACACATATACAGAAATATTTACATATTCTAAAATA  700

seq1  TAAACTGCTGAGTCAATATAATGTTATTTATATGGGTATTTTGAGGGCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACTGCTGAGTCAATATAATGTTATTTATATGGGTATTTTGAGGGCTT  750

seq1  GCCATTTGCACTTGACAGCATACTCGAATGCTCTTTCCTGGGGAGTATTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATTTGCACTTGACAGCATACTCGAATGCTCTTTCCTGGGGAGTATTG  800

seq1  CTTTAATTTACCCATTCTAATTCAGTATTTATTTACCTGAAATAGAGACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAATTTACCCATTCTAATTCAGTATTTATTTACCTGAAATAGAGACA  850

seq1  ATATAAAAATCATGAAATATTAAC-AAATGTGTTAATTGGTATATGTTGC  899
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  ATATAAAAATCATGAAATATTAACAAAATGTGTTAATTGGTATATGTTGC  900

seq1  CTTTCTATATATGTAGTTGAGTAGGAACTCAAATAAAT-GGAGGTTGTAA  948
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  CTTTCTATATATGTAGTTGAGTAGGAACTCAAATAAATGGGAGGTTGTAA  950

seq1  AT-AAATTTGCTTGTAATCATCA-TCCAATCGACAGAGTTCCTCATTGTT  996
      || |||||||||||||||||||| || |||||||||||||||||||||||
seq2  ATAAAATTTGCTTGTAATCATCATTCAAATCGACAGAGTTCCTCATTGTT  1000

seq1  TATCATAATCTATAT--CTTTGGAAA-TCGTCAATAATTCTACATTTCTG  1043
      |||||||||||||||   |||||||| ||||||||||||||||||| |||
seq2  TATCATAATCTATATTCTTTTGGAAATTCGTCAATAATTCTACATTCCTG  1050

seq1  TTACAACAAAATTTTAAAACATATACAATATTTATT-AACTTAATTATCT  1092
      ||||| |||| ||| ||||||||||||||||||||| ||||| |||||||
seq2  TTACATCAAATTTTAAAAACATATACAATATTTATTAAACTTTATTATCT  1100

seq1  TA--TGAAATTTTGATTACTAATAACTAGGTAGAAAA--GCTA-CT-GTT  1136
      ||  ||||| ||   | ||| || |||| ||||||||   ||| || |||
seq2  TAATTGAAACTTGACTAACTTAT-ACTA-GTAGAAAAAGCCTATCTGGTT  1148

seq1  GCTTTGAAATTCACAGGTATGTGGTGGACATCATG-TTTAGGAACATATC  1185
      ||||   |||||||||||||| ||| ||||||||| |||||||||| |||
seq2  GCTT--GAATTCACAGGTATG-GGTTGACATCATGTTTTAGGAACACATC  1195

seq1  AT  1187
      ||
seq2  AT  1197


seq1: chr14_97995707_97995983
seq2: B6Ng01-339B15.g_72_348 (reverse)

seq1  GATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTA  50
      ||||||   |||||||||||||||||||||||||||||||||||||||||
seq2  GATCTACTCATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTA  50

seq1  TCTATCTATCTATCTACATATATATATAATTATAAGAAAAAGCTTATGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATCTATCTATCTACATATATATATAATTATAAGAAAAAGCTTATGTA  100

seq1  CCTCCATTTTGCAAAAGAAAAGGTAATATCTATGATTTTTATATACCTAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCATTTTGCAAAAGAAAAGGTAATATCTATGATTTTTATATACCTAC  150

seq1  TAGAACTAACTGAATCATATAATGTTTTACCCTTCCTAATAATTTCAAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAACTAACTGAATCATATAATGTTTTACCCTTCCTAATAATTTCAAAT  200

seq1  TAACTAAAAAATTATTTTCTTCCAATACAAAGTAAAAATGCCAGTGAGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTAAAAAATTATTTTCTTCCAATACAAAGTAAAAATGCCAGTGAGGA  250

seq1  TTCCTTCTCAGTTTTAATTAACAGGAG  277
      |||||||||||||||||||||||||||
seq2  TTCCTTCTCAGTTTTAATTAACAGGAG  277


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