BAC Information

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BAC

Clone NameB6Ng01-340L24
Chromosome14 (Build37)
Map Location 80,499,501 - 80,500,030
singlet/doubletsinglet
Overlap genenone
Upstream gene1300010F03Rik, LOC100043765, AU017455, 1190002H23Rik, Narg1l, Mtrf1, Kbtbd7, EG432879, Wbp4, Elf1, LOC668560, Sugt1, Lect1, Pcdh8, EG629734, Olfm4
Downstream geneLOC672828
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-340L24.bB6Ng01-340L24.g
ACCGA124354GA124355
length1,0381,220
definitionB6Ng01-340L24.b B6Ng01-340L24.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcaactgaggaataccaaatggctgagaagcatctaaaaaaatg
ttcaacatctttagtcatcagggaaatgcaaatcaaaacaaccctgagat
tctacctcacaccagtcagaatgactaagatcaaagactcaggtgacagc
agatgctggtgaggatgtggagaaagaggaatactcctccattgatggtg
ggattgcaagctggtacaaacactctggaaatcagtttggcagttcctca
gaaaattggacatagtactactggaagatacagcaatacctctcctgggc
atgtacccagaagtgctccaacttgtagtagggacacatgctccactatg
ttcatagcagccttatttatgatagccagaagctggaaagaacccagatg
tccctcaacaaaggaatagatacaaaaaatatggtgcatttacacaatgg
agtattattcagttattaaaaacaatgaatttatgaaattcgttgacaaa
tggatgtatctggaggatatcattctgagtgaggtaacccaatcacaaaa
gaacacacatgatatgcactcactgataagtagatattagcccagaagct
cagaatacccaagatacaatttgcaaaacacatgaaactcaagaagaagg
aagaccaaagtgtggacactttgatccttcttagaaggcagaacaaaata
cccatggaaggagttacagagacaaagttcagagcagagactgaaggaat
aaccatccagaaactgccccacctaggaatccatcccataaacaaccacc
aaacccagacactactgagggatggctatggaaagggagtctaacctaca
tgcctccagatcagcagatctgaggaagatctgctgggctgagaggctgt
ggggaaatgaaaggttgcaggagacagcaggctgctcaagggcagctgtg
ggtgcccccaggggacccgttgagcagggagatgttgatccactttatta
gaggtttttcatggaagctttttatttgggcttattga
gaattctgcacctaatgcctctggccctggggttttggcagggagacttt
taagtactgcttttatttttctagggattttaagtctatttaaattgctt
atccaatcatgatttaactttggtaaatggtgtacattgaagaaattatc
tattcctttagatttttcaagtttctagagtacaggtttttaaagtatgt
ccttatgttttttagattttccttggtgtctgatgttttatcctcatttt
catttctaactttattaatttagatcttttctgctttttagtcattttgg
ctaaaggtttgaaaatcttattgatttttctcaaagaaccaacttcttgc
ttcattgattctgtttctgtgttattaatttcagctctgagttgtttgat
tatttcttgccatccactccttttgggtgtgatttctttgttttgtttta
gagctttcaggtgtgctgttaattgactaatataaaatcatccttttttt
cttttaatgtaagcacttaatattatcagtttgcctcttagagttacctt
catcatatcctataaatttatatatgtagtgtattcattgtcactcaatt
ctaaacagtttttcatttccttcttaatttctagcctgaccatttttcac
tcagtaacgagtggtccagtttccatgaatttgtaagctttctgctactg
ctgatacccagttttactctgtggtgggccagataggatgctgggtgtta
tttcaactttcttatattgattgggacttgccttacatccaaatccatgt
tcaatttcggagaaagtaccatgaactgctgagaaggaggtaagtctttt
gtgtctgggtgaaatgttgtgtaaatatctattaggctcatttggtttgt
gatgtgatttaactctggcatttctctatctagtttttgtctgcagcctt
gtgtattggccgagtgaagtcactctctatcacctgttgtggaagtacgt
tgacttttagctgtagtagtgccttcttttaatgaacttagttacctggg
tcagttgatataaacggttagaattgcacgggtcccctggcgattatttc
ctttgatgagtatggtaagtgcctttcctggctacttcgaataagtttga
atggagtcaacttcccgtatatgcaaggatcatccctagcatttcctttg
ctggcgcactgattacatac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_80499501_80500030
seq2: B6Ng01-340L24.b_201_722 (reverse)

seq1  CAAAGTGTCCACACTTTGGTCTTCGTTCTTCTTGAGTTTCATATGTTTTG  50
      |||||||||||||||||||||||| ||||||||||||||||| |||||||
seq2  CAAAGTGTCCACACTTTGGTCTTCCTTCTTCTTGAGTTTCATGTGTTTTG  50

seq1  CAAGTTGTAACTTATGTCTTGGTTATTCTAAGTTTCTGGGCTAATATCCA  100
      ||| |||||       |||||| |||||| || ||||||||||||||| |
seq2  CAAATTGTA-------TCTTGGGTATTCTGAGCTTCTGGGCTAATATCTA  93

seq1  CTTATCAATGAGTACATATCATGTGAGTTCTTTTGTGATTGGGTTACCTC  150
      ||||||| ||||| ||||||||||| ||||||||||||||||||||||||
seq2  CTTATCAGTGAGTGCATATCATGTGTGTTCTTTTGTGATTGGGTTACCTC  143

seq1  ACTCAGGATGATACCCTCCAGATCCATCTATTTGCCTAGGAATTTCATAA  200
      |||||| |||||| ||||||||| |||| ||||| | | |||||||||||
seq2  ACTCAGAATGATATCCTCCAGATACATCCATTTGTCAACGAATTTCATAA  193

seq1  ATTCATTCTTTTTAATAGCTGAGTATTACTCCATTGTGTAAATGTACCAC  250
      ||||||| ||||||||| |||| || |||||||||||||||||| |||| 
seq2  ATTCATTGTTTTTAATAACTGAATAATACTCCATTGTGTAAATGCACCAT  243

seq1  ATTTTTTGTATCCATTCCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGCT  300
      |||||||||||| |||||| ||||||||| ||||||||||||||||||||
seq2  ATTTTTTGTATCTATTCCTTTGTTGAGGGACATCTGGGTTCTTTCCAGCT  293

seq1  TCTGGCTATTATAAATAAGGCTGCTATGAACATAGTGGAGCATGTTTCCT  350
      ||||||||| ||||||||||||||||||||||||||||||||||| ||| 
seq2  TCTGGCTATCATAAATAAGGCTGCTATGAACATAGTGGAGCATGTGTCCC  343

seq1  TCTTATCGGTTGGAACATCTTCTGGATATATGCCCAGGAGAGGTATTGTG  400
      |  ||   |||||| || ||||||| || |||||||||||||||||||  
seq2  TACTACAAGTTGGAGCA-CTTCTGGGTACATGCCCAGGAGAGGTATTGCT  392

seq1  GGATCCTCTGGTAGTACTATGTCCAATTTTCTGAGGAACTGCCAGACTGA  450
      | ||| ||  |||||||||||||||||||||||||||||||||| |||||
seq2  GTATCTTCCAGTAGTACTATGTCCAATTTTCTGAGGAACTGCCAAACTGA  442

seq1  TTTCCAGAGTGGTTGTACAAGCTTGCAATCCCACCAATAATGGAGGAGTG  500
      ||||||||||| |||||| |||||||||||||||||  ||||||||||| 
seq2  TTTCCAGAGTGTTTGTACCAGCTTGCAATCCCACCATCAATGGAGGAGTA  492

seq1  TTCCTCTTTCTCCACATCCTCACCAGCATC  530
      ||||||||||||||||||||||||||||||
seq2  TTCCTCTTTCTCCACATCCTCACCAGCATC  522