BAC Information

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BAC

Clone NameB6Ng01-341E11
Chromosome14 (Build37)
Map Location 28,617,207 - 28,618,102
singlet/doubletsinglet
Overlap geneErc2
Upstream geneDnahc7c, Asb14, Appl1, Hesx1, Il17rd, LOC665333, Arhgef3, LOC100040147, Ccdc66, LOC665370
Downstream geneLOC100040206, Wnt5a, LOC100040218
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-341E11.bB6Ng01-341E11.g
ACCGA124712GA124713
length1,158899
definitionB6Ng01-341E11.b B6Ng01-341E11.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaatactgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggcttagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggtggttcctca
gaaaattggacatagtactaccggaggatcccgcaatacctctactgggc
atatatccagaagatgtcccaacaggtaagaaggacacatgatccactat
gttcatagcagccttatttataatagccagaagctgggaagaacccagat
gcccctcaatagaagaatggatacagaaaatgtggtacatttacacaatg
gagtactactaagctattaaaaagaatgaatttatgaaattcctaggcaa
atggatggacctggagggcatcatcctgagtaaggtaacccaatcacaaa
tgtactcactgataagtggatattagcccagaaacttaggataccaaaga
tataagatacaatttgctaaaagcatgaaactcaagaagaacgaagacca
aagtgtggacactttgccccttcttaaaattgggaacaaaaaacccatgg
aagaagttacagagacaaagtttagagctgagacaaaaggatggaccatc
taaagactgccatatccagggatccatcccataatcagcttccaaaagct
gacaccattgcatacactagcaagattttgctgaaaggacccaaatatag
ctgtctcttgtgagactatgccggggcctagcaaacaaagaagtggatgc
tcacagtcagctattggatggatcacagggctcccaatggaggagctaga
gaagtacccaatgagctaaagggaactgcaccctataggtgaacaacatt
atgaactaaccagtacccctgagctcttgactctagctgcatatttatca
aagatggcctagtcggccatcactgtagagaggccattgacttgcaactt
atatgcccagtacaaggaacgccaggccaaaagttgaatgtggttgtgta
gggaatga
gaattccttctgatcaccaagatgaagtcagtttcacccaacccccacta
gggggtggagttttcaagatgaagtcagttccacctatcccccactaggg
ggtggagttttcaagatgaagtcagtttcacctatcccccactagggggt
ggagttttcacgatgaagtcagtttcacctatcccccactagggggtgat
gttttcaagatgaagtcagtttcaccaatcccccactagggggtggcgtt
tacaggcttcattgaaaatcagttctagagatggaaattatgttctgtac
cattgaatagcaagtgatactttgtagtttccttgtaatggttgctgaag
caatttaaaaccataatcatctaaaatactttcttttaaatgaaaacaat
ttcatctgtgtgtatgtgtgcatgcatgcacagcatgaccaggaataaag
ttcgggtccccagtcttggtggcaagtgccattacccatgaagccatttc
agtggcactaaattattatttttaaaatcccatgggtgattaaagtacat
ctttggaatattttaacatgtagcaaaacatcattttgtatgttatttaa
ttttaatgtttggaagacaggtgctgtttatcaccttccatgttacacct
gagaaacccgagactttagataagctagctttcttgtcttagttttctgc
tactgctaaggaaatgaggccaggattaccactcagcacctgacttgaca
catacggagaatccggtcaatctgaacgagtgaatgaatggatatgttaa
tgtgtcagatgacccactgttacgtgggaattcagttcctgagcagctag
gaaagaaaactgagtcagatttaccctcttctcaagaattagtatgcct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_28617207_28618102
seq2: B6Ng01-341E11.g_72_970

seq1  GAATTCCTTCTGATCACCAAGATGAAGTCAGTTTCACCCAACCCCCACTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTCTGATCACCAAGATGAAGTCAGTTTCACCCAACCCCCACTA  50

seq1  GGGGGTGGAGTTTTCAAGATGAAGTCAGTTCCACCTATCCCCCACTAGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGTGGAGTTTTCAAGATGAAGTCAGTTCCACCTATCCCCCACTAGGG  100

seq1  GGTGGAGTTTTCAAGATGAAGTCAGTTTCACCTATCCCCCACTAGGGGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGAGTTTTCAAGATGAAGTCAGTTTCACCTATCCCCCACTAGGGGGT  150

seq1  GGAGTTTTCACGATGAAGTCAGTTTCACCTATCCCCCACTAGGGGGTGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTTTTCACGATGAAGTCAGTTTCACCTATCCCCCACTAGGGGGTGAT  200

seq1  GTTTTCAAGATGAAGTCAGTTTCACCAATCCCCCACTAGGGGGTGGCGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCAAGATGAAGTCAGTTTCACCAATCCCCCACTAGGGGGTGGCGTT  250

seq1  TACAGGCTTCATTGAAAATCAGTTCTAGAGATGGAAATTATGTTCTGTAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGGCTTCATTGAAAATCAGTTCTAGAGATGGAAATTATGTTCTGTAC  300

seq1  CATTGAATAGCAAGTGATACTTTGTAGTTTCCTTGTAATGGTTGCTGAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGAATAGCAAGTGATACTTTGTAGTTTCCTTGTAATGGTTGCTGAAG  350

seq1  CAATTTAAAACCATAATCATCTAAAATACTTTCTTTTAAATGAAAACAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTAAAACCATAATCATCTAAAATACTTTCTTTTAAATGAAAACAAT  400

seq1  TTCATCTGTGTGTATGTGTGCATGCATGCACAGCATGACCAGGAATAAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATCTGTGTGTATGTGTGCATGCATGCACAGCATGACCAGGAATAAAG  450

seq1  TTCGGGTCCCCAGTCTTGGTGGCAAGTGCCATTACCCATGAAGCCATTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGGGTCCCCAGTCTTGGTGGCAAGTGCCATTACCCATGAAGCCATTTC  500

seq1  AGTGGCACTAAATTATTATTTTTAAAATCCCATGGGTGATTAAAGTACAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGCACTAAATTATTATTTTTAAAATCCCATGGGTGATTAAAGTACAT  550

seq1  CTTTGGAATA-TTTAACATGTAGCAAAACATCATTTTGTATGTTATTTAA  599
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGAATATTTTAACATGTAGCAAAACATCATTTTGTATGTTATTTAA  600

seq1  -TTTAATG-TTGGAAGACAGGTGCTG-TTATCACCTTCCATGTTACACCT  646
       ||||||| ||||||||||||||||| |||||||||||||||||||||||
seq2  TTTTAATGTTTGGAAGACAGGTGCTGTTTATCACCTTCCATGTTACACCT  650

seq1  GAGAAACCCGAGAC-TTAGATAAGCTAGCTTTCTTGTCTTAGTTTTCTGC  695
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  GAGAAACCCGAGACTTTAGATAAGCTAGCTTTCTTGTCTTAGTTTTCTGC  700

seq1  TACTGCTAAGGAAATGAGGCCAGGATTACCACTCAGCACCTGACTTGACA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGCTAAGGAAATGAGGCCAGGATTACCACTCAGCACCTGACTTGACA  750

seq1  CATACGGAGAATCCGGTCAATCTGAACGAGTGAATGAATGGATATGTTAA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACGGAGAATCCGGTCAATCTGAACGAGTGAATGAATGGATATGTTAA  800

seq1  TGTGTCAGATGACCAACTGTTACGTGGGAATCCAG-TCCTGAGCAAGCTA  844
      |||||||||||||| |||||||||||||||| ||| |||||||| |||||
seq2  TGTGTCAGATGACCCACTGTTACGTGGGAATTCAGTTCCTGAGC-AGCTA  849

seq1  GGAAAGAAAACTGAGTCAGATTTACCCTCTTCTCAAAGAATTAGTTATGC  894
      |||||||||||||||||||||||||||||||||| ||||||||| |||||
seq2  GGAAAGAAAACTGAGTCAGATTTACCCTCTTCTC-AAGAATTAG-TATGC  897

seq1  CT  896
      ||
seq2  CT  899