BAC Information

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BAC

Clone NameB6Ng01-342B13
Chromosome14 (Build37)
Map Location 106,824,024 - 106,825,206
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC620376, LOC100043469, Spry2, EG621364, LOC212084, Trim52, LOC100043807, LOC100043476
Downstream geneLOC100043809, LOC668736, EG668738, EG668739, LOC621487, EG668743, LOC100043811, LOC621499, LOC100043814, EG668742, LOC668748
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-342B13.bB6Ng01-342B13.g
ACCGA125284GA125285
length1,2161,137
definitionB6Ng01-342B13.b B6Ng01-342B13.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttgtttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ctttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttctttga
tccatttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccatttgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttaccacaattgc
tctgtagtaaagctttaggtccggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctaggttttttgttattccagatg
aatttgcaaattgctccttctaattcattgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatattgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcagagacttgaagtttttatcata
cagatctttcacttccttagttagagtcacgccgagatattttatattat
ttgtgactatgagaagggtgttgttcccttatttctttctcagcttgttt
attctttgtgtagaagaaggccattgacttgttgagttaaattttatatc
cagctactcacgaagctgtatcagttaaggagttctctggtggatttaag
ttcacttataattaccatcatatcattctgcaaaaggaattgacctcctt
ttccaattgaatccctgaatcccttgtgtggcaattgctcggctaaacct
cacgagatcatgaggt
gaattcaggtgctgcacctatgtaggtttcttctgaaccctccgtgctgt
tctattgatctgtgtctgccttgtgttgctgctatgctgttctcgttgct
atggctctgtcgtgtgcacacacatagacacacacacacacacacacaca
cacacacacacatgaatgaggtgggggggacagagacagagagacagaga
cagaaagacagagagacagacacaaagacaaagagagagaacaaaagtgg
tcctcagaaactgaaatcatatgtgaaataagagatgtacagagaagaaa
ctgtgagaacagttgagagcacagactgtgtctgtatggtcactttcatg
aggataagtgagtctctatgtacatttcagttgagcaggtacagggctat
ctctgtgcgttatcaggacagcaataagcagaagatttaagagactgaaa
taaaattgtgtaatataatttggattgtataagcccgaacaaattctagg
tgttaaattcgtaacatgtatggattttacaattttctaatttccaatta
atatctatttaattgatttactattaattttaaacttgtacattaattca
tttcaaattattgctctttcattattgcagagtgcttacatttgcataag
gctactaataactcaatcatggagtagaaagaaatatatactgcatcatc
tactctatcaccataactttgtatgtctaagtaagatacaataaaaggaa
aaagataaggaatttaaattatgtgcagtgtttaaacagtgtttaggaat
gtagaatttagaaaataaggcttttttccccttcttcaatatctacacat
aaatttctgtgatagaaattatatttttattacactagttatattaaata
ttatgatattattgatgatcgattgaacagcttgggtaaaataaattagg
tctcttcggctgagccattaaagcatcattgcagaagagtgaaatgcttc
atgatacctcctcctatctgctgacgtctctagtctggctacagtacatc
tgtgagctcgcttagcctctgcgactaattttatctggagggaggactgc
agcattcccattattgcagaatctgttaggtacttat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_106824024_106825206
seq2: B6Ng01-342B13.g_70_1206 (reverse)

seq1  ATAAGTACCTAAACAGGATGTCCTTGCAAATTAAATGAGAAATAGCTCTG  50
      |||||||||| |||| ||| ||  |||||    |||| |||   |||   
seq2  ATAAGTACCT-AACA-GAT-TC--TGCAA---TAATGGGAA--TGCT---  37

seq1  GCAGGTTTCCTCCCTCAGGAATAACATTAAGTCTGGCAGAGGGCTTAAGC  100
      ||||   |||||||||  | |||| ||| ||||  |||||||   |||||
seq2  GCAG---TCCTCCCTCCAG-ATAAAATT-AGTC--GCAGAGG--CTAAGC  78

seq1  GGAAGCTCACAGGAATGTACTGTAGCCAGGACTAGAGGACGTTCCAGCAG  150
      |  |||||||||  |||||||||||||| ||||||| |||||  ||||||
seq2  G--AGCTCACAG--ATGTACTGTAGCCA-GACTAGA-GACGT--CAGCAG  120

seq1  ATAGGGAGGAGGTTAATTCATGAAGGCCAATTTCACTTCCTTCTGCAATG  200
      ||| |||||||||    ||||||||    ||||||||  |||||||||||
seq2  ATA-GGAGGAGGT---ATCATGAAG---CATTTCACT--CTTCTGCAATG  161

seq1  AATGCTTTAATGGCCTCAGGCCGAAGAGACCTAATTTATTTTACCCAAGC  250
       |||||||||||| |||| |||||||||||||||||||||||||||||||
seq2  -ATGCTTTAATGG-CTCA-GCCGAAGAGACCTAATTTATTTTACCCAAGC  208

seq1  TGTTTCAATCGATCATCAATAATATCATAAATATTTAAATATAACTAGTG  300
      || ||||||||||||||||||||||||| ||||||| |||||||||||||
seq2  TG-TTCAATCGATCATCAATAATATCAT-AATATTT-AATATAACTAGTG  255

seq1  TAATAAAAATATAATTTCTTATCACAGAAATTTATGTGTAGATATTGAAG  350
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TAATAAAAATATAATTTC-TATCACAGAAATTTATGTGTAGATATTGAAG  304

seq1  AAGGGGAAAAAAGCCTTATTTTCTAAATTCTACATTCCTAAACACTGTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGGAAAAAAGCCTTATTTTCTAAATTCTACATTCCTAAACACTGTTT  354

seq1  AAACACTGCACATAATTTAAATTCCTTATCTTTTTCCTTTTATTGTATCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACTGCACATAATTTAAATTCCTTATCTTTTTCCTTTTATTGTATCT  404

seq1  TACTTAGACATACAAAGTTATGGTGATAGAGTAGATGATGCAGTATATAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTAGACATACAAAGTTATGGTGATAGAGTAGATGATGCAGTATATAT  454

seq1  TTCTTTCTACTCCATGATTGAGTTATTAGTAGCCTTATGCAAATGTAAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTCTACTCCATGATTGAGTTATTAGTAGCCTTATGCAAATGTAAGC  504

seq1  ACTCTGCAATAATGAAAGAGCAATAATTTGAAATGAATTAATGTACAAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTGCAATAATGAAAGAGCAATAATTTGAAATGAATTAATGTACAAGT  554

seq1  TTAAAATTAATAGTAAATCAATTAAATAGATATTAATTGGAAATTAGAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAATTAATAGTAAATCAATTAAATAGATATTAATTGGAAATTAGAAA  604

seq1  ATTGTAAAATCCATACATGTTACGAATTTAACACCTAGAATTTGTTCGGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTAAAATCCATACATGTTACGAATTTAACACCTAGAATTTGTTCGGG  654

seq1  CTTATACAATCCAAATTATATTACACAATTTTATTTCAGTCTCTTAAATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATACAATCCAAATTATATTACACAATTTTATTTCAGTCTCTTAAATC  704

seq1  TTCTGCTTATTGCTGTCCTGATAACGCACAGAGATAGCCCTGTACCTGCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGCTTATTGCTGTCCTGATAACGCACAGAGATAGCCCTGTACCTGCT  754

seq1  CAACTGAAATGTACATAGAGACTCACTTATCCTCATGAAAGTGACCATAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTGAAATGTACATAGAGACTCACTTATCCTCATGAAAGTGACCATAC  804

seq1  AGACACAGTCTGTGCTCTCAACTGTTCTCACAGTTTCTTCTCTGTACATC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACACAGTCTGTGCTCTCAACTGTTCTCACAGTTTCTTCTCTGTACATC  854

seq1  TCTTATTTCACATATGATTTCAGTTTCTGAGGACCACTTTTGTTCTCTCT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTATTTCACATATGATTTCAGTTTCTGAGGACCACTTTTGTTCTCTCT  904

seq1  CTTTGTCTTTGTGTCTGTCTCTCTGTCTTTCTGTCTCTGTCTCTCTGTCT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTCTTTGTGTCTGTCTCTCTGTCTTTCTGTCTCTGTCTCTCTGTCT  954

seq1  CTGTCCCCCCCACCTCATTCATGTGTGTGTGTGTGTGTGTGTGTGTGTGT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCCCCCCCACCTCATTCATGTGTGTGTGTGTGTGTGTGTGTGTGTGT  1004

seq1  GTGTGTCTATGTGTGTGCACACGACAGAGCCATAGCAACGAGAACAGCAT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTCTATGTGTGTGCACACGACAGAGCCATAGCAACGAGAACAGCAT  1054

seq1  AGCAGCAACACAAGGCAGACACAGATCAATAGAACAGCACGGAGGGTTCA  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGCAACACAAGGCAGACACAGATCAATAGAACAGCACGGAGGGTTCA  1104

seq1  GAAGAAACCTACATAGGTGCAGCACCTGAATTC  1183
      |||||||||||||||||||||||||||||||||
seq2  GAAGAAACCTACATAGGTGCAGCACCTGAATTC  1137