BAC Information

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BAC

Clone NameB6Ng01-342E21
Chromosome14 (Build37)
Map Location 80,696,140 - 80,697,311
singlet/doubletsinglet
Overlap genenone
Upstream gene1190002H23Rik, Narg1l, Mtrf1, Kbtbd7, EG432879, Wbp4, Elf1, LOC668560, Sugt1, Lect1, Pcdh8, EG629734, Olfm4
Downstream geneLOC672828
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-342E21.bB6Ng01-342E21.g
ACCGA125429GA125430
length1,1891,145
definitionB6Ng01-342E21.b B6Ng01-342E21.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatctttccaacacttttatcatgaatgggtgttagatcctg
tcaaatgctttttctgcatctaacaagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgca
ttaatgtgttcttggattcggttagcgagaattttattgaggatttttgc
atcgatattcataagcgaaattggtctgaagttctctatctttgttgggt
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagagtaccttctacttctattttgtgaaatagtttgtgcagaactgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccgtctg
gtcctgggctttttttggctgggagactattgataactgcttctatttct
tttggtgatatgggactgtttagatggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcgtccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctcccttttcatttctgattttgttaat
taggattttgtccctgtgccctttagtgagtctagctaagggtttatcta
tcttgttgattttctcaaagaaccaactcctcgtttggttaattctttga
atagttcttcttgtttccatttggttgatttcacccctgagtttgattat
ttcctgccgtctactcctcttgggtgaatttgcttcctttttttctaggg
ctgtgttgtcaagctgctagtatgtgctctctcccgtttcttcttggaag
gcactcagagctatgagtttccctctaagaaatgctttcattgtgtccca
taggtttggggtacgtgtggcctccattttcattaacttctaaaagtctt
attttcttttctttattcccttccttgaccaagtatcattgagaagagag
tttatttcaggtttcatgtgatggttgccttccattatttattgtgtaat
tgagatcaccgcttaaggccatgggggtcgcgaatggag
gaattctgtaatggctttggaaagccgtctctggcgaacactagaaaaca
ctgtacataaattgagatgaggctccctttggataattcttctaaatcat
ttttgacatatgtattaagacaaagctgggaggaaattccctctggaaaa
agacctacagcctctactgctctgctattctctgacttcccatctcttct
ttcccctttgttggagaatttagggcaacaatcatttccatcacccagag
cctgacttcaggaccatgctggtctttttaacattcttctttggatctta
aattatgatattcaaagttcccttaaaagttattcaaaggaacaaagagc
catcacaatagcaccaggacagcaaaaagaatgaatggactaagatagga
ctcaggttgatagatccacaaagcctctttttcaactagtaaaagaatat
attaaaattatgatttctgagagttgggggtagtatagatgccacaggta
gaatgtctgaggattatggaatgcacggtggagaaagaaccaagaaaata
agcttggtctgcaaatgatgtaccatttacttgaggcatcattgtctcaa
gtcatcagaagtgagtctgcctgtcgttcttccagaaacacagccctgct
gtgctcttgggctttgtagtagaggctgatgaaattctgtggtatgggaa
ttgatgagtttggtgtttgtaacagccctgcaaaaagagtgctgagagag
caattaggacaagataagcattaaaaatactagaaaatgttagtgctgca
acctagcacccaagactgtcagctgaaaggcctcctatgctccttaaacc
acacaggtaagtagccacttcttagaacttcagcaattagctaggaacca
ctcacacaactttaacaattaccccctctactaaatttattgctttcttc
ttctttttttaactataattttactatcactttacatctgcttctgcccc
actccaggtcacccccctcccacatctcttctctcctccaagctccccat
ctcctctgaaaggtggtcatccccctttgatgcctgctggtaccttaagt
tctgtaaggcaagtgctcttcccactgaagcagacagggcagctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_80696140_80697311
seq2: B6Ng01-342E21.g_66_1210

seq1  GAATTCTGTAATGGCTTTGGAAAGCCGTCTCTGGCGAACACTAGAAAACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTAATGGCTTTGGAAAGCCGTCTCTGGCGAACACTAGAAAACA  50

seq1  CTGTACATAAATTGAGATGAGGCTCCCTTTGGATAATTCTTCTAAATCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTACATAAATTGAGATGAGGCTCCCTTTGGATAATTCTTCTAAATCAT  100

seq1  TTTTGACATATGTATTAAGACAAAGCTGGGAGGAAATTCCCTCTGGAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGACATATGTATTAAGACAAAGCTGGGAGGAAATTCCCTCTGGAAAA  150

seq1  AGACCTACAGCCTCTACTGCTCTGCTATTCTCTGACTTCCCATCTCTTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCTACAGCCTCTACTGCTCTGCTATTCTCTGACTTCCCATCTCTTCT  200

seq1  TTCCCCTTTGTTGGAGAATTTAGGGCAACAATCATTTCCATCACCCAGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCTTTGTTGGAGAATTTAGGGCAACAATCATTTCCATCACCCAGAG  250

seq1  CCTGACTTCAGGACCATGCTGGTCTTTTTAACATTCTTCTTTGGATCTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGACTTCAGGACCATGCTGGTCTTTTTAACATTCTTCTTTGGATCTTA  300

seq1  AATTATGATATTCAAAGTTCCCTTAAAAGTTATTCAAAGGAACAAAGAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATGATATTCAAAGTTCCCTTAAAAGTTATTCAAAGGAACAAAGAGC  350

seq1  CATCACAATAGCACCAGGACAGCAAAAAGAATGAATGGACTAAGATAGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCACAATAGCACCAGGACAGCAAAAAGAATGAATGGACTAAGATAGGA  400

seq1  CTCAGGTTGATAGATCCACAAAGCCTCTTTTTCAACTAGTAAAAGAATAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGGTTGATAGATCCACAAAGCCTCTTTTTCAACTAGTAAAAGAATAT  450

seq1  ATTAAAATTATGATTTCTGAGAGTTGGGGGTAGTATAGATGCCACAGGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAATTATGATTTCTGAGAGTTGGGGGTAGTATAGATGCCACAGGTA  500

seq1  GAATGTCTGAGGATTATGGAATGCACGGTGGAGAAAGAACCAAGAAAATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGTCTGAGGATTATGGAATGCACGGTGGAGAAAGAACCAAGAAAATA  550

seq1  AGCTTGGTCTGCAAATGATGTACCATTTACTTGAGGCATCATTGTCTCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTGGTCTGCAAATGATGTACCATTTACTTGAGGCATCATTGTCTCAA  600

seq1  GTCATCAGAAGTGAGTCTGCCTGTCGTTCTTCCAGAAACACAGCCCTGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATCAGAAGTGAGTCTGCCTGTCGTTCTTCCAGAAACACAGCCCTGCT  650

seq1  GTGCTCTTGGGCTTTGTAGTAGAGGCTGATGAAATTCTGTGGTATGGGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTCTTGGGCTTTGTAGTAGAGGCTGATGAAATTCTGTGGTATGGGAA  700

seq1  TTGATGAGTTTGGTGTTTGTAACAGCCCTGCAAAAAGAGTGCTGAGAGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATGAGTTTGGTGTTTGTAACAGCCCTGCAAAAAGAGTGCTGAGAGAG  750

seq1  CAATTAGGACAAGATAAGCATTAAAAATACTAGAAAATGTTAGTGCTGCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTAGGACAAGATAAGCATTAAAAATACTAGAAAATGTTAGTGCTGCA  800

seq1  ACCTAGCACCCAAGACTGTCAGCTG-AAGGCCTCCTATGCTCCTTAAACC  849
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  ACCTAGCACCCAAGACTGTCAGCTGAAAGGCCTCCTATGCTCCTTAAACC  850

seq1  ACACAGGTAAGTAGCCAC-TCTTAGAACTTCAGCAATTAGCTAGGAACCA  898
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  ACACAGGTAAGTAGCCACTTCTTAGAACTTCAGCAATTAGCTAGGAACCA  900

seq1  CTCACACAACTTTAACAATTACCCCCTCTACTAAAATTTATTGCTTTCTT  948
      |||||||||||||||||||||||||||||||| ||||||||||||||| |
seq2  CTCACACAACTTTAACAATTACCCCCTCTACT-AAATTTATTGCTTTC-T  948

seq1  TCTTTCTTTTTTTTAACTTATAATTTTTACTTATTCACTTTACATCTTGC  998
      ||||   |||||||||| ||||| |||||||   |||||||||||| |||
seq2  TCTT--CTTTTTTTAAC-TATAA-TTTTACT--ATCACTTTACATC-TGC  991

seq1  TTTCTGCCCCACTCCAGGTCA-CCCCCTCCCACAATTCTTCTTTCCTCTT  1047
       |||||||||||||||||||| ||||||||||||  |||||| |      
seq2  -TTCTGCCCCACTCCAGGTCACCCCCCTCCCACATCTCTTCTCT------  1034

seq1  CCCTCCCAGCTCCCCATCTCCTCTGAAAGGGTGGGCCATCCCCCTTTGAT  1097
       ||||| |||||||||||||||||||||||   || ||||||||||||||
seq2  -CCTCCAAGCTCCCCATCTCCTCTGAAAGG--TGGTCATCCCCCTTTGAT  1081

seq1  TTCCCCTGCCCTGGTACTTTAAGTCTCTGTAAGGCGAGGTGCTTCCTTTC  1147
          ||||  ||||||| |||||| |||||||||| | |||||    |||
seq2  ---GCCTG--CTGGTACCTTAAGT-TCTGTAAGGC-AAGTGCT---CTTC  1121

seq1  CCACTGAGGCCAGACAAGGCAGCTC  1172
      ||||||| | |||||| ||||||||
seq2  CCACTGAAG-CAGACAGGGCAGCTC  1145