BAC Information

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BAC

Clone NameB6Ng01-343D21
Chromosome14 (Build37)
Map Location 102,789,107 - 102,790,309
singlet/doubletsinglet
Overlap genenone
Upstream geneTbc1d4, Commd6, Uchl3, Lmo7, LOC100043795, LOC545567
Downstream geneLOC669278, Kctd12, LOC668699, Irg1, Cln5, Fbxl3, LOC100043441, Phr1, LOC100043797
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-343D21.bB6Ng01-343D21.g
ACCGA126070GA126071
length5161,208
definitionB6Ng01-343D21.b B6Ng01-343D21.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
tacatcttgatctgcaggtagcagaaggggactgtctacatcctgggtat
agcttgagcattggcaacctcaaagccttgtccccacagtgacatacttc
ctccaacaaggccacatgtactccaacaaggcctgacttcctaatagtaa
cacttcccacggaccaaccattcaaacacatgagtgtatgggggggggca
aacttattcagaccaccatagtcattcaatacctttaaaaacacatacag
gtaatatataatacagactgaactggttgtatttatgaaattgtataaat
gtatcatatatataaacaactattcatgaataaaagaggtcacgagtgtg
gaagagagcaagggtgggttttgaaggagaaatgtaagaaggaaatataa
tctattataatctcaagaaataaaagaaatactttaaaagatagaaagaa
atgaaaatggaaggaaagaacaaaggaagggagggaaaaaggggtacagg
aggaagggggagggga

gaattcactaggcgctaacaggtcctcagtgtgcctgaatttctaggaca
tatcccttgctgtcccacaagaagatacaacaggggtaatttttagattt
ccagggtgaaatgggggcacagttgtgatttttgtattgaaaacttggaa
atagggaaagatgttatccagtggcagaaatggatttgacttaccctgct
caagggccaggttgtgtttccccttctgttttatatgtaattctatgagg
tgaatattttatactactatggaggagacaagaggcacacagaaatatta
agttatgtgttcaaggtagcatatcaaagatttatctgtcttttgtacga
tgttttcattggaaaatattttataaagtgaaaaagtttagtgtaactgc
aatctaaaaattaatcaatttctggtgatttgtttttctacttaataaaa
aaggaaagggtaagggctcaagcccattggttaggccttgagtagcatgg
gcaaagccctggtttcaatccctagacccattcaagaaataaagtgatac
gctatggttaatggaaaaagttaactcccgaagagaaaaaaaaaaaagat
aaaaataaaattagatcggtgacctaaatatattttctgaagttctttgg
gtttcagaaagcaattttataagatataaggaagcatttactagatattg
aacccatcaaagaagaaatgaaatgtagaatactgagttgacaatgtgag
ctaaagccttattgtctgctgtactgcatccccttaaaatgatgttgata
tttcaacccctgcaacctcacatgtagccatatttgggggaggacattaa
gtagatgattaagttaaaaatgagactgtttgagtggagtttaatccaat
tgaattgtgttcttatgaaaaggaagggacacgaggcatccacgtgcaca
tgggaagaacgtactgtgaggcccaaataggggatatcacagtcaaaaat
gaggccttgagggaaaccagatcttcgaactctctaactgttacattact
tctaggctgagggaaaaatactcttgctgggtggaggatttagtctggtt
attttggttttggcagaactgggtaactaataccaaggcctttttctatg
gcatctatcggtacataggtaaattttttattatacaattacacctgcgc
aaatgtct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_102789107_102790309
seq2: B6Ng01-343D21.g_65_1272 (reverse)

seq1  AGACATT---GCAGGTG--ATTG--TAATAAAAAATTTTACTATGTAAAC  43
      |||||||   |||||||  ||||  |||||||||||||  |||||| | |
seq2  AGACATTTGCGCAGGTGTAATTGTATAATAAAAAATTTACCTATGT-ACC  49

seq1  GATAGATGCAATAG-AAAAGGC--TGGTATTAGTTACCCAGGTCTGCCAA  90
      ||||||||| |||| |||||||  ||||||||||||||||| ||||||||
seq2  GATAGATGCCATAGAAAAAGGCCTTGGTATTAGTTACCCAGTTCTGCCAA  99

seq1  AA-CAAAATAA-CAGACTAAATCTTC--ACCAGCAAGAGTTATTTTTCCC  136
      || |||||||| ||||||||||| ||   |||||||||| ||||||||||
seq2  AACCAAAATAACCAGACTAAATCCTCCACCCAGCAAGAG-TATTTTTCCC  148

seq1  TTCAGCCTAGAAGTTAAATGT-ACAGTTTAGAGAGTTCGAAGATCTGGTT  185
       |||||||||||||  ||||| |||| |||||||||||||||||||||||
seq2  -TCAGCCTAGAAGT--AATGTAACAG-TTAGAGAGTTCGAAGATCTGGTT  194

seq1  TCCCTCAAGGCCTCATTTTTTGACTTGTTGATTATCCCCTATTTGGGGCC  235
      ||||||||||||||| |||||||||   ||| |||||||||||| |||||
seq2  TCCCTCAAGGCCTCA-TTTTTGACT--GTGA-TATCCCCTATTT-GGGCC  239

seq1  TCACAGTACGTTTCTTCCATGTGCACGTGGATGCCTCGTGTCCCTTTCTT  285
      ||||||||||||  | |||||||||||||||||||||||||||||| |||
seq2  TCACAGTACGTTCTTCCCATGTGCACGTGGATGCCTCGTGTCCCTTCCTT  289

seq1  TTCATAAGAACACAATTCAATTGGATTAAACTCCACTCAAACAGTCTCAT  335
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATAAGAACACAATTCAATTGGATTAAACTCCACTCAAACAGTCTCAT  339

seq1  TTTTAACTTAATCATCTACTTAATGTCCT-CCCCAAATATGGCTACATGT  384
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  TTTTAACTTAATCATCTACTTAATGTCCTCCCCCAAATATGGCTACATGT  389

seq1  GAGGTTGCAGGGGTTGAAATATCAACATCATTTTAAGGGGATGCAGTACA  434
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTTGCAGGGGTTGAAATATCAACATCATTTTAAGGGGATGCAGTACA  439

seq1  GCAGACAATAAGGCTTTAGCTCACATTGTCAACTCAGTATTCTACATTTC  484
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGACAATAAGGCTTTAGCTCACATTGTCAACTCAGTATTCTACATTTC  489

seq1  ATTTCTTCTTTGATGGGTTCAATATCTAGTAAATGCTTCCTTATATCTTA  534
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTTCTTTGATGGGTTCAATATCTAGTAAATGCTTCCTTATATCTTA  539

seq1  TAAAATTGCTTTCTGAAACCCAAAGAACTTCAGAAAATATATTTAGGTCA  584
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATTGCTTTCTGAAACCCAAAGAACTTCAGAAAATATATTTAGGTCA  589

seq1  CCGATCTAATTTTATTTTTATCTTTTTTTTTTTTCTCTTCGGGAGTTAAC  634
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGATCTAATTTTATTTTTATCTTTTTTTTTTTTCTCTTCGGGAGTTAAC  639

seq1  TTTTTCCATTAACCATAGCGTATCACTTTATTTCTTGAATGGGTCTAGGG  684
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCCATTAACCATAGCGTATCACTTTATTTCTTGAATGGGTCTAGGG  689

seq1  ATTGAAACCAGGGCTTTGCCCATGCTACTCAAGGCCTAACCAATGGGCTT  734
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAAACCAGGGCTTTGCCCATGCTACTCAAGGCCTAACCAATGGGCTT  739

seq1  GAGCCCTTACCCTTTCCTTTTTTATTAAGTAGAAAAACAAATCACCAGAA  784
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCCTTACCCTTTCCTTTTTTATTAAGTAGAAAAACAAATCACCAGAA  789

seq1  ATTGATTAATTTTTAGATTGCAGTTACACTAAACTTTTTCACTTTATAAA  834
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGATTAATTTTTAGATTGCAGTTACACTAAACTTTTTCACTTTATAAA  839

seq1  ATATTTTCCAATGAAAACATCGTACAAAAGACAGATAAATCTTTGATATG  884
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTTCCAATGAAAACATCGTACAAAAGACAGATAAATCTTTGATATG  889

seq1  CTACCTTGAACACATAACTTAATATTTCTGTGTGCCTCTTGTCTCCTCCA  934
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCTTGAACACATAACTTAATATTTCTGTGTGCCTCTTGTCTCCTCCA  939

seq1  TAGTAGTATAAAATATTCACCTCATAGAATTACATATAAAACAGAAGGGG  984
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAGTATAAAATATTCACCTCATAGAATTACATATAAAACAGAAGGGG  989

seq1  AAACACAACCTGGCCCTTGAGCAGGGTAAGTCAAATCCATTTCTGCCACT  1034
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACAACCTGGCCCTTGAGCAGGGTAAGTCAAATCCATTTCTGCCACT  1039

seq1  GGATAACATCTTTCCCTATTTCCAAGTTTTCAATACAAAAATCACAACTG  1084
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATAACATCTTTCCCTATTTCCAAGTTTTCAATACAAAAATCACAACTG  1089

seq1  TGCCCCCATTTCACCCTGGAAATCTAAAAATTACCCCTGTTGTATCTTCT  1134
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCCCATTTCACCCTGGAAATCTAAAAATTACCCCTGTTGTATCTTCT  1139

seq1  TGTGGGACAGCAAGGGATATGTCCTAGAAATTCAGGCACACTGAGGACCT  1184
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGGACAGCAAGGGATATGTCCTAGAAATTCAGGCACACTGAGGACCT  1189

seq1  GTTAGCGCCTAGTGAATTC  1203
      |||||||||||||||||||
seq2  GTTAGCGCCTAGTGAATTC  1208


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