BAC Information

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BAC

Clone NameB6Ng01-343F23
Chromosome14 (Build37)
Map Location 28,426,774 - 28,427,900
singlet/doubletsinglet
Overlap genenone
Upstream geneA630054L15Rik, Arf4, E430028B21Rik, 4921531P07Rik, Dnahc7c, Asb14, Appl1, Hesx1, Il17rd, LOC665333, Arhgef3, LOC100040147, Ccdc66, LOC665370
Downstream geneErc2, LOC100040206, Wnt5a, LOC100040218
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-343F23.bB6Ng01-343F23.g
ACCGA126167GA126168
length4361,111
definitionB6Ng01-343F23.b B6Ng01-343F23.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
actcctagtcactcccattctcgggatgtaatagtggggtgatgggcaag
caacaaatcaggagctgtcacaccatatcaggtgctgaaacgtcacgctg
cgggttataaaagcagcgccattttcccggttcaggatcttcctgagaag
caagcaataaagctcttgccgcggaagattctggtttgttgcgtctttct
tgccggtcgagcgggacgcaatatggtattgtgggagtggggtgtctata
actctctcatctgctcttgggaccctccccatcgtactggtttgccttgc
ccagtccggatgtgaggtttggcctgatgttgctgtaccttgttatgctc
tatgcagttgatgtccctgggaggtctgctcttttctgaagaaaaacaga
ggaagaatagatcaggggacgaggggaggtgggggg

gaattctcttttgcaaagtatttgccttaaggatttaggatatatttttt
tgtccctatttatattctgcagtccataatttgagagccgtggatgtact
gaaggtatgacgacctttcctccccaaccctgaaacacctgctagaaccc
acccccacccagaggcacacagtgtctgtccaagccttgggaagggcata
tgccactctaaacaacatctgacacgcctcatgctccaataaacttcact
ctggaacaaggtcacagaaggaatgcattttgatccttactcgcggtata
attttgctcttaaagagaaatgcagcatttaaaaaggcatgtctcctctt
cttatttttaggactgttttgcttccaaatgttttctggccagcgcccag
ctttttatgtgtgttcctgaaactttagaaagaacaacagcttctgaaag
tcacattggccgttgaggaaatctcaaagctgtcacagaatatagccctg
acaactgaatgtactatgcattgagatgatgctaatcttcatgtattgag
cattttctataggtctgccacagccaaagaaactttcccagcaatttctt
atctactcgcttcaagttatgtatgaagcaagtactactaattattctat
gtgtttttttttttttttttgagacaggatcatgcttagtacggcaagct
gtcctcaaatttgtcatcctcttaatcttgtgggtgctgtgattacaaac
agatgtgggtcatcacacccaactatctgtcttcaccccctccttatgat
tatcaggagtcttacaggaactaaattatccaagattatataacttgtaa
atgaatggactcgatggaaaactcaaatctgaccgttgattatactttgc
tccttgttgcagatattatagagcgggaggattgagtactggctcttcag
acaaatttaagtcactacccattgtacctatggctcaggcttcaacatct
agcacaatataatctcactcatacacccaaatgtctcaaactggtttaag
acctttgatgattgatgagttcagtcctatactcatgtgctggccactgg
aatgtggtggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_28426774_28427900
seq2: B6Ng01-343F23.g_67_1177

seq1  GAATTCTCTTTTGCAAAGTATTTGCCTTAAGGATTTAGGATATATTTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTTTGCAAAGTATTTGCCTTAAGGATTTAGGATATATTTTTT  50

seq1  TGTCCCTATTTATATTCTGCAGTCCATAATTTGAGAGCCGTGGATGTACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCCTATTTATATTCTGCAGTCCATAATTTGAGAGCCGTGGATGTACT  100

seq1  GAAGGTATGACGACCTTTCCTCCCCAACCCTGAAACACCTGCTAGAACCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGTATGACGACCTTTCCTCCCCAACCCTGAAACACCTGCTAGAACCC  150

seq1  ACCCCCACCCAGAGGCACACAGTGTCTGTCCAAGCCTTGGGAAGGGCATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCCACCCAGAGGCACACAGTGTCTGTCCAAGCCTTGGGAAGGGCATA  200

seq1  TGCCACTCTAAACAACATCTGACACGCCTCATGCTCCAATAAACTTCACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCACTCTAAACAACATCTGACACGCCTCATGCTCCAATAAACTTCACT  250

seq1  CTGGAACAAGGTCACAGAAGGAATGCATTTTGATCCTTACTCGCGGTATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAACAAGGTCACAGAAGGAATGCATTTTGATCCTTACTCGCGGTATA  300

seq1  ATTTTGCTCTTAAAGAGAAATGCAGCATTTAAAAAGGCATGTCTCCTCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGCTCTTAAAGAGAAATGCAGCATTTAAAAAGGCATGTCTCCTCTT  350

seq1  CTTATTTTTAGGACTGTTTTGCTTCCAAATGTTTTCTGGCCAGCGCCCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTTTTAGGACTGTTTTGCTTCCAAATGTTTTCTGGCCAGCGCCCAG  400

seq1  CTTTTTATGTGTGTTCCTGAAACTTTAGAAAGAACAACAGCTTCTGAAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTATGTGTGTTCCTGAAACTTTAGAAAGAACAACAGCTTCTGAAAG  450

seq1  TCACATTGGCCGTTGAGGAAATCTCAAAGCTGTCACAGAATATAGCCCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATTGGCCGTTGAGGAAATCTCAAAGCTGTCACAGAATATAGCCCTG  500

seq1  ACAACTGAATGTACTATGCATTGAGATGATGCTAATCTTCATGTATTGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACTGAATGTACTATGCATTGAGATGATGCTAATCTTCATGTATTGAG  550

seq1  CATTTTCTATAGGTCTGCCACAGCCAAAGAAACTTTCCCAGCAATTTCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTCTATAGGTCTGCCACAGCCAAAGAAACTTTCCCAGCAATTTCTT  600

seq1  ATCTACTCGCTTCAAGTTATGTATGAAGCAAGTACTACTAATTATTCTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTACTCGCTTCAAGTTATGTATGAAGCAAGTACTACTAATTATTCTAT  650

seq1  GTGTTTTTTTTTTTTTTTTTGAGACAGGATCATGCTTAGTACGGCAAGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTTTTTTTTTTTTTTTGAGACAGGATCATGCTTAGTACGGCAAGCT  700

seq1  GTCCTCAAATTTGTCATCCTCTTAATCTTGTGGGTGCTGTGATTACAAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTCAAATTTGTCATCCTCTTAATCTTGTGGGTGCTGTGATTACAAAC  750

seq1  AGATGTGGGTCATCACACCCAACTATCTGTCTTCACCCCCTCCTTATGAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGTGGGTCATCACACCCAACTATCTGTCTTCACCCCCTCCTTATGAT  800

seq1  TATCAGGAGTCTTACAGGAACTAAATTATCCAAGATTATATAACTTGTAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAGGAGTCTTACAGGAACTAAATTATCCAAGATTATATAACTTGTAA  850

seq1  ATGAATGGACTCGATGGAAAACTCAAATCTGACCGTTGATTATACTTTGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATGGACTCGATGGAAAACTCAAATCTGACCGTTGATTATACTTTGC  900

seq1  TCCTTGTTGCAGATATTATAGAGCGGGAGGATTGAGTACTGGCTCTTCAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTGTTGCAGATATTATAGAGCGGGAGGATTGAGTACTGGCTCTTCAG  950

seq1  ACAAATTTAAGTTCACTACCAATTGTACCTATGGCTCCAGGCTTCAACAT  1000
      ||||||||||| |||||||| ||||||||||||||| |||||||||||||
seq2  ACAAATTTAAG-TCACTACCCATTGTACCTATGGCT-CAGGCTTCAACAT  998

seq1  CTAGCACAAATATAATCTCCACTCAATTACACCCAAAATGTCTCAAACTG  1050
      ||||||| |||||||||| ||||||  ||||||| |||||||||||||||
seq2  CTAGCAC-AATATAATCT-CACTCA--TACACCC-AAATGTCTCAAACTG  1043

seq1  GTTTAAAGACCCTTTGAATGAGTGGATGAGTTCAAGGTCACTATACTCAA  1100
      |||| |||| |||||| |||| | ||||||||||  ||| |||||||| |
seq2  GTTT-AAGA-CCTTTG-ATGA-TTGATGAGTTCA--GTC-CTATACTC-A  1085

seq1  TGTGCTGGGCAAACTGGAGTGT-GTGGG  1127
      |||||||| |  |||||| ||| |||||
seq2  TGTGCTGGCC--ACTGGAATGTGGTGGG  1111


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