BAC Information

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BAC

Clone NameB6Ng01-343P24
Chromosome14 (Build37)
Map Location 98,345,426 - 98,345,781
singlet/doubletsinglet
Overlap geneDach1
Upstream geneLOC668654, EG668659
Downstream geneLOC635593, LOC619716
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-343P24.b
ACCGA126619
length566
definitionB6Ng01-343P24.b
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcccaagttttcctctgtttcatgttatcatgtccatcaatgtc
cttcatgttcaggtcatgttttgttagccattcgggtgagactttaaata
gtgtggcttctgatatttctaaatgatatattccattccggacttaatgc
tccaaagtctcccccactctgcacttagacttcccgtgagtctctgttaa
ttcccagctttggcaagaagaagctcctccaatgagggcgaagtgaggcg
ctgctctgtgggggtagcagtatgttgttaggagtaagattattgatatg
tttctttagaagggtaatagatgtagttcacgaacgagttcgtgatgggg
agcagggcggggggagggtatagggaactttcgggatagcatttgaaatg
taaataaagaaaatatctaataaaaataagaataataaagggtaatagaa
ggcttttaccctaggcctgtgacctacctagtgtcatgttcttggtcact
ttagtagtttcatgtatggagtccatatcagggagtgcaactgatgtcca
ttttgaaaatatggat
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_98345426_98345781
seq2: B6Ng01-343P24.b_411_617 (reverse)

seq1  ATCCATATTTTCAAAAGATGATGTGAGAATAACCTGGAAAATA-TTGAAA  49
      ||||||||||||||||                  |||| |  | ||| | 
seq2  ATCCATATTTTCAAAA------------------TGGACATCAGTTGCA-  31

seq1  TACTTTCTGAGAAGACACCTCCCAGGTGTTTTCTTC-TAGATTAGATTAT  98
                        ||||| | | |   || | || || | | || 
seq2  ------------------CTCCCTGATATGGACTCCATACATGAAACTA-  62

seq1  TGTGGCTGATTGGGTCAGAGGAAGAGATACAGGGATATCATCTGTATGGT  148
           || |    ||  ||  ||||   ||                    
seq2  -----CTAA---AGT--GACCAAGA---AC--------------------  79

seq1  AGAATGATTTTTTTTTTTTACTACTGCTAGAGTTTGTCACTGGTTAATGA  198
         ||||            ||||  | |||     ||||| ||   | | 
seq2  ---ATGA-----------CACTA--GGTAG-----GTCACAGGCCTAGG-  107

seq1  ATAGTAAAATGGAAATTGAAGTTGTCTTGTGTGCATCTAGTTTATTTGTC  248
         ||||||              | ||        ||||  |||    | 
seq2  ---GTAAAA--------------GCCT--------TCTA--TTACCCTTT  130

seq1  ATTACATTTTTTAAATATTTTATTAGATATTTTCTTTATTTACATTTTAA  298
      ||||   || |||    |||||||||||||||||||||||||||||| ||
seq2  ATTA---TTCTTA---TTTTTATTAGATATTTTCTTTATTTACATTTCAA  174

seq1  ATGTTATCCTCTTTCCTACTTTTCCCTCCAAAAATACCCTATCCCTTCCC  348
      ||| ||||                   || ||| | |||||| || ||||
seq2  ATGCTATC-------------------CCGAAAGTTCCCTATACCCTCCC  205

seq1  CCTCCCCC  356
      ||      
seq2  CC------  207


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