BAC Information

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BAC

Clone NameB6Ng01-344F12
Chromosome14 (Build37)
Map Location 68,886,826 - 68,887,919
singlet/doubletsinglet
Overlap genenone
Upstream geneEbf2, EG628416, LOC100043046, LOC100043056, Cdca2, Kctd9, Gnrh1, Dock5, Nefl, Nefm, LOC100043072
Downstream geneAdam7, Adamdec1, Adam28, LOC641033, LOC100043082, Stc1, EG545808, Nkx2-6, Nkx3-1, Slc25a37
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-344F12.bB6Ng01-344F12.g
ACCGA126857GA126858
length6781,090
definitionB6Ng01-344F12.b B6Ng01-344F12.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcacaaagaacaaattaaaaaagaaagattgacctataggccagac
tgtgggagactttctttaataatttatgtgggagagctcagctcactgtg
ggtagaggcaccctgggaaggtgatcctgagatgtatatgaaaccagact
gagcaagccgtgaggagtacttccataagtagtgttccttcatgacctct
tgtgatagtttgtatatgcttggcccagggagtgatactatttggaggtg
tggtcttgttggagtaggtgtgtcactgtgggagtgggctttaagaccct
actcctagctgcctggaagtgaggattctgctagcagtcttcagatgaag
atatagatctctcagctcctcctgcaccatgcctgcctggatgctgccat
gctccctccttgatgatactggactgaatctctgaaactgtaagccagcc
ccaattaaatgttgtcatttataagacttgtcttggtcatggtatctctt
cacagcagtaaaactctaagtaagatacttctgtttcagtttctgcctcc
aggtttttttcttgagttcctgccctgacttccttgagcaatcgaatgta
gcctgagaatttgaagatagaacaaaccttttcttcctcaagttgctttt
ggccatgggtgtttttatcacagtttgt
gaattcacctgaattttaaattggtgtccttcccaaattttgcactgaat
ctatcagaaaattaagcaagaatttcaaggagacaccctgtactttttgc
ccttcttcactgttttgtgactgagattaactcagctcatgaataatgac
gtaatgtcagggagggaaaaactgtgtcctgtggatgattaagtggaaat
actggctcagtcttacaaaagtggtgtcattttggcaaaaatgagaagct
aaataagtttgcatggtgatgtatcaccctgtgtcctttccaataacatg
ttaagtttttctaccaaacaagttttaaccaaatcttgccataacaccat
tattaaaatcacacttcattgttttaattaaatagcaaataacagttata
gtacatgttgtttagagctataatacaaattttatactccacaaccctct
tgaactaatacttagccaacttcattctcttaaatactgttgtctaaatt
attaagagaaagtctgtttttcagtaaattgaaaatgaatcactacaggt
caatgtagaatttttggaatggctgggacttgctcactggggagtttcag
aatgcaaatttgtagtagtggggagctgtcaccttcaagggttcttctct
tttcacgagatcatctcttctgtcatcatcatatttacaatattggagag
attaaatcacaaaggctgtcttgaattgacttgctctttacaaccaatgt
acccttcatttctttttcttgccttatcgcaatggcaagtgagagttaaa
attctaaaatataatagtagctatcttgactttttcaaatcttaagagaa
agtatctagtcttcatctatcatgagtgatggcagctgtgttttttctat
tgatgcctcaaatcagatttttaaaaattatttttattttgtgtgtattt
attcaagaaagtatattgaattgtgcaaaattccctacctgcataataat
ctttgtcattatgtgttacatgctgaatgacacttgcagtgtttgaaact
tttgctttgggaatatgattactaaagattacctgtattt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_68886826_68887919
seq2: B6Ng01-344F12.g_67_1156 (reverse)

seq1  AAATACA-GTATACTGTTAGTAAATCATATCCCCAAAGCAAAAGTTTCAA  49
      ||||||| |||  || ||||| |||||||| |||||||||||||||||||
seq2  AAATACAGGTAATCT-TTAGT-AATCATATTCCCAAAGCAAAAGTTTCAA  48

seq1  ACAACTGCAAGTGTCATTCAGCATGTTAACACATAATGACAAAGATTA-T  98
      || |||||||||||||||||||||| |||||||||||||||||||||| |
seq2  AC-ACTGCAAGTGTCATTCAGCATG-TAACACATAATGACAAAGATTATT  96

seq1  ATGCAGGTAAGGAATTTTGCACAATTCAATATACTTTCTTGAATAAAATA  148
      ||||||||| |||||||||||||||||||||||||||||||||| |||||
seq2  ATGCAGGTAGGGAATTTTGCACAATTCAATATACTTTCTTGAAT-AAATA  145

seq1  CACACAAAATAATAAATAATTTTTAAAAATCTGATTTGAGGCATCAATAG  198
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  CACACAAAATAA-AAATAATTTTTAAAAATCTGATTTGAGGCATCAATAG  194

seq1  AAAAAACACAGCTGCCATCACTCATGATAGATGAAGACTAGATACTTTCT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAACACAGCTGCCATCACTCATGATAGATGAAGACTAGATACTTTCT  244

seq1  CTTAAGATTTGAAAAAGTCAAGATAGCTACTATTATATTTTAGAATTTTA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAGATTTGAAAAAGTCAAGATAGCTACTATTATATTTTAGAATTTTA  294

seq1  ACTCTCACTTGCCATTGCGATAAGGCAAGAAAAAGAAATGAAGGGTACAT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTCACTTGCCATTGCGATAAGGCAAGAAAAAGAAATGAAGGGTACAT  344

seq1  TGGTTGTAAAGAGCAAGTCAATTCAAGACAGCCTTTGTGATTTAATCTCT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTGTAAAGAGCAAGTCAATTCAAGACAGCCTTTGTGATTTAATCTCT  394

seq1  CCAATATTGTAAATATGATGATGACAGAAGAGATGATCTCGTGAAAAGAG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATATTGTAAATATGATGATGACAGAAGAGATGATCTCGTGAAAAGAG  444

seq1  AAGAACCCTTGAAGGTGACAGCTCCCCACTACTACAAATTTGCATTCTGA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAACCCTTGAAGGTGACAGCTCCCCACTACTACAAATTTGCATTCTGA  494

seq1  AACTCCCCAGTGAGCAAGTCCCAGCCATTCCAAAAATTCTACATTGACCT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCCCCAGTGAGCAAGTCCCAGCCATTCCAAAAATTCTACATTGACCT  544

seq1  GTAGTGATTCATTTTCAATTTACTGAAAAACAGACTTTCTCTTAATAATT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTGATTCATTTTCAATTTACTGAAAAACAGACTTTCTCTTAATAATT  594

seq1  TAGACAACAGTATTTAAGAGAATGAAGTTGGCTAAGTATTAGTTCAAGAG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACAACAGTATTTAAGAGAATGAAGTTGGCTAAGTATTAGTTCAAGAG  644

seq1  GGTTGTGGAGTATAAAATTTGTATTATAGCTCTAAACAACATGTACTATA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGTGGAGTATAAAATTTGTATTATAGCTCTAAACAACATGTACTATA  694

seq1  ACTGTTATTTGCTATTTAATTAAAACAATGAAGTGTGATTTTAATAATGG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTTATTTGCTATTTAATTAAAACAATGAAGTGTGATTTTAATAATGG  744

seq1  TGTTATGGCAAGATTTGGTTAAAACTTGTTTGGTAGAAAAACTTAACATG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTATGGCAAGATTTGGTTAAAACTTGTTTGGTAGAAAAACTTAACATG  794

seq1  TTATTGGAAAGGACACAGGGTGATACATCACCATGCAAACTTATTTAGCT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTGGAAAGGACACAGGGTGATACATCACCATGCAAACTTATTTAGCT  844

seq1  TCTCATTTTTGCCAAAATGACACCACTTTTGTAAGACTGAGCCAGTATTT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATTTTTGCCAAAATGACACCACTTTTGTAAGACTGAGCCAGTATTT  894

seq1  CCACTTAATCATCCACAGGACACAGTTTTTCCCTCCCTGACATTACGTCA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTTAATCATCCACAGGACACAGTTTTTCCCTCCCTGACATTACGTCA  944

seq1  TTATTCATGAGCTGAGTTAATCTCAGTCACAAAACAGTGAAGAAGGGCAA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTCATGAGCTGAGTTAATCTCAGTCACAAAACAGTGAAGAAGGGCAA  994

seq1  AAAGTACAGGGTGTCTCCTTGAAATTCTTGCTTAATTTTCTGATAGATTC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTACAGGGTGTCTCCTTGAAATTCTTGCTTAATTTTCTGATAGATTC  1044

seq1  AGTGCAAAATTTGGGAAGGACACCAATTTAAAATTCAGGTGAATTC  1094
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCAAAATTTGGGAAGGACACCAATTTAAAATTCAGGTGAATTC  1090