BAC Information

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BAC

Clone NameB6Ng01-344N04
Chromosome14 (Build37)
Map Location 101,358,370 - 101,486,545
singlet/doubletdoublet
Overlap genenone
Upstream geneKlf12, LOC100043413, EG668683, EG668684
Downstream gene1700110M21Rik, LOC100043421, LOC382936, Tbc1d4, Commd6, Uchl3, Lmo7, LOC100043795, LOC545567
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-344N04.bB6Ng01-344N04.g
ACCGA127209GA127210
length1,0541,143
definitionB6Ng01-344N04.b B6Ng01-344N04.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(101,358,370 - 101,359,419)(101,485,385 - 101,486,545)
sequence
gaattctctatctggctatctttggattggactacaaagtggccatactg
ttgtaatcataacgaaatcttatttttaaaattattattcccatatttca
aaaataagtctaccttgcatttgtaatttgctaggcagagatgtaaaatc
tatctcccggagcccacagtgatgccatccatactctgttatgggaggtg
agtgagaaggaactataacatccgtgtgggtctggatgccacagggaaca
caacagagaaaccagtcagtggctcttcccagttgatttgtgacactgga
cacagaaaacgtggcatgagacgaatagctgagattttttgcaagtctac
caacaagctgatatacataacaataagtatagcaataacaataaaagccc
aatctgttgacatcagaatctgtctacctgcctttatttttccctggctc
ctctgtataaaaagacaatcacagaacccataaaaccacatctgttggct
gagtagtgtccctcagcatacagccactagaaagtacaccgtaggtggac
atcacaggtcactggtggaagcatctgcacagtgttcaaagtcatggcca
ctgtggtcattttcacaaagcactgatacattttaggatcaggttcctca
cttagccacccagatccatgatcgcccacacattggtgagttcggtggat
caacaggaatatgtttagggttatgttgggcccctctgggtgctttgcta
aagagttattccttattcgtcttccatctccagcaatctcagccaaacag
tctttcatggcctggtgttctgtgggaaatagagtctcttttgggaacct
aaagaatgagactcagtagggaatgcttgcctctggctgctttataaaat
aaatacctcaacagtagcgcttgcataatgaaattgtagcatccattaga
gattaaggaaattgtatcaaatgatacaggttgagaatgtgtttttaggg
atagataagagcggcttaatatacatagttttctgttttggtttttcttg
ggtg

gaattccttccccaaagcatcaaaaggcctaccccttgcacgtcacattg
cttcttttctgggttcttgattaaatgatcctgatcaaaagactgttcct
tttgtctctcgtgtcctaatgacatacttaattttcttttatgcacttca
aaaagaattcttttgtatgaggtgatgtataaaaatcccattagagaatt
attttaaaagaataaaatctttgacccctgtaaaatttgtggagagaaaa
gaatttatataaaaaaagactttggcctttagtctacagttgaaaagctg
ttcagatggtttagggcagttgagcttttgcttttatgaggactgattac
tgcttggactatcttgtaacagagggcagaatgatgggcaagtcccccag
aaaggaggttgcttctcactgagacggactgctccaagaagacagtcaca
gctataaatcaaatgttcttcttgtcagagttctctcatttctttgtccc
catgtcattccatcttcgctaacttgtcctgagaagggaaattaaatatt
ttgtaacataacctcctcagcctttaaccatcttagtacataagatctca
tactttgtttttaccctattggtagtgttatagagccactaatccccaac
ctataagtcaggcatggctcaatatactgttcctctagctccatcagtca
ttattctacttttctctgtacagattttcctacttctgacattttgaatt
cagtgaagcccgtggctgtatctgcacaggagtctctcacttggtatacc
atcatcacagttcactcccactgcagcgtgatcgagccttcactcctctc
aacagctgaacctcattatgctgaatgggatggcccatgtttacttcatc
tattcatcagttgtcagattcttgaggtttttttcagtattataattaat
gctgctatgagcatgcctgtaccagtatttctgtggatctgtgtttcaac
tcactgggtatatactaggggtgtactgttaggaccagagagtggtctta
gaactcctaaatctaatgatgacaattcacatctcctctaggcatggagt
gagaattattttctttcacttcccgcactttggcaacctgaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_101358370_101359419
seq2: B6Ng01-344N04.b_48_1101

seq1  GAATTCTCTATCTGGCTATCTTTGGATTGGACTACAAAGTGGCCATACTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTATCTGGCTATCTTTGGATTGGACTACAAAGTGGCCATACTG  50

seq1  TTGTAATCATAACGAAATCTTATTTTTAAAATTATTATTCCCATATTTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAATCATAACGAAATCTTATTTTTAAAATTATTATTCCCATATTTCA  100

seq1  AAAATAAGTCTACCTTGCATTTGTAATTTGCTAGGCAGAGATGTAAAATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAAGTCTACCTTGCATTTGTAATTTGCTAGGCAGAGATGTAAAATC  150

seq1  TATCTCCCGGAGCCCACAGTGATGCCATCCATACTCTGTTATGGGAGGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTCCCGGAGCCCACAGTGATGCCATCCATACTCTGTTATGGGAGGTG  200

seq1  AGTGAGAAGGAACTATAACATCCGTGTGGGTCTGGATGCCACAGGGAACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAGAAGGAACTATAACATCCGTGTGGGTCTGGATGCCACAGGGAACA  250

seq1  CAACAGAGAAACCAGTCAGTGGCTCTTCCCAGTTGATTTGTGACACTGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAGAGAAACCAGTCAGTGGCTCTTCCCAGTTGATTTGTGACACTGGA  300

seq1  CACAGAAAACGTGGCATGAGACGAATAGCTGAGATTTTTTGCAAGTCTAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGAAAACGTGGCATGAGACGAATAGCTGAGATTTTTTGCAAGTCTAC  350

seq1  CAACAAGCTGATATACATAACAATAAGTATAGCAATAACAATAAAAGCCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAAGCTGATATACATAACAATAAGTATAGCAATAACAATAAAAGCCC  400

seq1  AATCTGTTGACATCAGAATCTGTCTACCTGCCTTTATTTTTCCCTGGCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTGTTGACATCAGAATCTGTCTACCTGCCTTTATTTTTCCCTGGCTC  450

seq1  CTCTGTATAAAAAGACAATCACAGAACCCATAAAACCACATCTGTTGGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTATAAAAAGACAATCACAGAACCCATAAAACCACATCTGTTGGCT  500

seq1  GAGTAGTGTCCCTCAGCATACAGCCACTAGAAAGTACACCGTAGGTGGAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAGTGTCCCTCAGCATACAGCCACTAGAAAGTACACCGTAGGTGGAC  550

seq1  ATCACAGGTCACTGGTGGAAGCATCTGCACAGTGTTCAAAGTCATGGCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACAGGTCACTGGTGGAAGCATCTGCACAGTGTTCAAAGTCATGGCCA  600

seq1  CTGTGGTCATTTTCACAAAGCACTGATACATTTTAGGATCAGGTTCCTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGGTCATTTTCACAAAGCACTGATACATTTTAGGATCAGGTTCCTCA  650

seq1  CTTAGCCACCCAGATCCATGATCGCCCACACATTGGTGAGTTCGGTGGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGCCACCCAGATCCATGATCGCCCACACATTGGTGAGTTCGGTGGAT  700

seq1  CAACAGGAATATGTTTAGGGTTATGTTGGGCCCCTCTGGGTGCTTTGCTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAGGAATATGTTTAGGGTTATGTTGGGCCCCTCTGGGTGCTTTGCTA  750

seq1  AAGAGTTATTCCTTATTCGTCTTCCATCTCCAGCAATCTCAGCCAAACAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGTTATTCCTTATTCGTCTTCCATCTCCAGCAATCTCAGCCAAACAG  800

seq1  TCTTTCATGGCCTGGTGTTCTGTGGGAAATAGAGTCTC-TTTGGGAACCT  849
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TCTTTCATGGCCTGGTGTTCTGTGGGAAATAGAGTCTCTTTTGGGAACCT  850

seq1  AAAGAATGAGACTCAGTAGGGAATGCTTGCCTCTGGCTGCTTTATAAAAT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAATGAGACTCAGTAGGGAATGCTTGCCTCTGGCTGCTTTATAAAAT  900

seq1  AAATACTTCAACAGTAGCGCTTGCATAATGAAATTGTAGCATCCATAAGA  949
      |||||| ||||||||||||||||||||||||||||||||||||||| |||
seq2  AAATACCTCAACAGTAGCGCTTGCATAATGAAATTGTAGCATCCATTAGA  950

seq1  GATTAAGGAAATTGTATCAAATGATACAGTTTGAGAATGTG-TTTTAGGG  998
      ||||||||||||||||||||||||||||| ||||||||||| ||||||||
seq2  GATTAAGGAAATTGTATCAAATGATACAGGTTGAGAATGTGTTTTTAGGG  1000

seq1  ATAGATAAGAGCGGCTTAATATACATAGTTTTCTGTTTT-GTTTTTC-TG  1046
      ||||||||||||||||||||||||||||||||||||||| ||||||| ||
seq2  ATAGATAAGAGCGGCTTAATATACATAGTTTTCTGTTTTGGTTTTTCTTG  1050

seq1  GGTG  1050
      ||||
seq2  GGTG  1054


seq1: chr14_101485385_101486545
seq2: B6Ng01-344N04.g_68_1210 (reverse)

seq1  TTTCAGGTTTTGCACAAGATGCGGGGACAGTGAAAAGAAAATAATCCTCA  50
      |||||||  |||| |||  ||||||   |||| |||||||||||| ||||
seq2  TTTCAGG--TTGC-CAAAGTGCGGG--AAGTG-AAAGAAAATAATTCTCA  44

seq1  CT-CATGGCTAGAGGAGATGTGAAATGGTCCAACCATTTAGAATTTAGGA  99
      || |||| |||||||||||||| ||| |||  | || |||| ||||||||
seq2  CTCCATGCCTAGAGGAGATGTG-AATTGTC--ATCA-TTAG-ATTTAGGA  89

seq1  GTTTCTAAAGAACAACTCTCTGGTCCTAACAGTACAACCCCTAAGTATAT  149
      | ||||||   || ||||||||||||||||||||| |||||| |||||||
seq2  G-TTCTAA--GACCACTCTCTGGTCCTAACAGTAC-ACCCCT-AGTATAT  134

seq1  ACCCAAGTGAGTTGAAAACACAGATCCACAGAAATACTGGTACAGGCATG  199
      |||| ||||||||| |||||||||||||||||||||||||||||||||||
seq2  ACCC-AGTGAGTTG-AAACACAGATCCACAGAAATACTGGTACAGGCATG  182

seq1  CTCATAGCAGCATTAATTATAATACTGAAAAAAAACCTCAAGAATCTGAC  249
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  CTCATAGCAGCATTAATTATAATACTG-AAAAAAACCTCAAGAATCTGAC  231

seq1  AACTGATGAATAGATGAAGTAAACATGGGCCATCCCATTCAGCATAATGA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGATGAATAGATGAAGTAAACATGGGCCATCCCATTCAGCATAATGA  281

seq1  GGTTCAGCTGTTGAGAGGAGTGAAGGCTCGATCACGCTGCAGTGGGAGTG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCAGCTGTTGAGAGGAGTGAAGGCTCGATCACGCTGCAGTGGGAGTG  331

seq1  AACTGTGATGATGGTATACCAAGTGAGAGACTCCTGTGCAGATACAGCCA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGTGATGATGGTATACCAAGTGAGAGACTCCTGTGCAGATACAGCCA  381

seq1  CGGGCTTCACTGAATTCAAAATGTCAGAAGTAGGAAAATCTGTACAGAGA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGCTTCACTGAATTCAAAATGTCAGAAGTAGGAAAATCTGTACAGAGA  431

seq1  AAAGTAGAATAATGACTGATGGAGCTAGAGGAACAGTATATTGAGCCATG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTAGAATAATGACTGATGGAGCTAGAGGAACAGTATATTGAGCCATG  481

seq1  CCTGACTTATAGGTTGGGGATTAGTGGCTCTATAACACTACCAATAGGGT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGACTTATAGGTTGGGGATTAGTGGCTCTATAACACTACCAATAGGGT  531

seq1  AAAAACAAAGTATGAGATCTTATGTACTAAGATGGTTAAAGGCTGAGGAG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACAAAGTATGAGATCTTATGTACTAAGATGGTTAAAGGCTGAGGAG  581

seq1  GTTATGTTACAAAATATTTAATTTCCCTTCTCAGGACAAGTTAGCGAAGA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATGTTACAAAATATTTAATTTCCCTTCTCAGGACAAGTTAGCGAAGA  631

seq1  TGGAATGACATGGGGACAAAGAAATGAGAGAACTCTGACAAGAAGAACAT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAATGACATGGGGACAAAGAAATGAGAGAACTCTGACAAGAAGAACAT  681

seq1  TTGATTTATAGCTGTGACTGTCTTCTTGGAGCAGTCCGTCTCAGTGAGAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTTATAGCTGTGACTGTCTTCTTGGAGCAGTCCGTCTCAGTGAGAA  731

seq1  GCAACCTCCTTTCTGGGGGACTTGCCCATCATTCTGCCCTCTGTTACAAG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACCTCCTTTCTGGGGGACTTGCCCATCATTCTGCCCTCTGTTACAAG  781

seq1  ATAGTCCAAGCAGTAATCAGTCCTCATAAAAGCAAAAGCTCAACTGCCCT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTCCAAGCAGTAATCAGTCCTCATAAAAGCAAAAGCTCAACTGCCCT  831

seq1  AAACCATCTGAACAGCTTTTCAACTGTAGACTAAAGGCCAAAGTCTTTTT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCATCTGAACAGCTTTTCAACTGTAGACTAAAGGCCAAAGTCTTTTT  881

seq1  TTATATAAATTCTTTTCTCTCCACAAATTTTACAGGGGTCAAAGATTTTA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATAAATTCTTTTCTCTCCACAAATTTTACAGGGGTCAAAGATTTTA  931

seq1  TTCTTTTAAAATAATTCTCTAATGGGATTTTTATACATCACCTCATACAA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTAAAATAATTCTCTAATGGGATTTTTATACATCACCTCATACAA  981

seq1  AAGAATTCTTTTTGAAGTGCATAAAAGAAAATTAAGTATGTCATTAGGAC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATTCTTTTTGAAGTGCATAAAAGAAAATTAAGTATGTCATTAGGAC  1031

seq1  ACGAGAGACAAAAGGAACAGTCTTTTGATCAGGATCATTTAATCAAGAAC  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGAGAGACAAAAGGAACAGTCTTTTGATCAGGATCATTTAATCAAGAAC  1081

seq1  CCAGAAAAGAAGCAATGTGACGTGCAAGGGGTAGGCCTTTTGATGCTTTG  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAAAAGAAGCAATGTGACGTGCAAGGGGTAGGCCTTTTGATGCTTTG  1131

seq1  GGGAAGGAATTC  1161
      ||||||||||||
seq2  GGGAAGGAATTC  1143


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