BAC Information

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BAC

Clone NameB6Ng01-345E08
Chromosome14 (Build37)
Map Location 112,540,313 - 112,541,399
singlet/doubletsinglet
Overlap genenone
Upstream geneSlitrk5, LOC100043501
Downstream geneEG223186, LOC100043509
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-345E08.bB6Ng01-345E08.g
ACCGA127521GA127522
length9631,089
definitionB6Ng01-345E08.b B6Ng01-345E08.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagctctgagccccatttttaatggggttatttgattt
tttcgagtccaccttcttaagttctttatatatatattggatattagtcc
cctatccgatttgggataggtaaagatcctttcccaatctgttggtggcc
tttttgtcttattgacggtgtcttttgctttgcagaacctttgcaatttt
atgaggtcccatttatcgattctcgatcttacagcacaagccattgctgt
tctgttcaggaatttttcccctgtacccatatcttcaaggcttttcccta
ctttctcctctataagtttcagtgtctctggttttatgtggagttcctta
atccacttagatttgaccttagtacaaggagataggaatggatcaattca
catttttctacatgataaccgccagttgtgccagcaccatctgttgaaaa
tgctgtctcttttccactggatggttttagctcccttgtcaaagatcaag
tgaccataggtgtgtgggttcagctctgggtcttcaattctgttccattg
gtctacttgtcagtcactataccaataccatgcaatttttatcacaattg
ctctgtagtacagctttaggtccggcatggtgattccaccagaggttcat
ttatccttgagaagagtttttgttatcctaggttttttgttattccagat
gaatttgcagattgatctttctaattcgttgaagaattgagtaggaattt
tgatggggattgcattgaatctgtagattgcttttggcaagatagccatt
tttacaatgttgatcctgccaatccatgagcatgggagatctttccatct
tctgagatcttctttaatttctttctttagagacttgaagttcttatcat
acagatctttcacttcccttagttagagtcacaccaaggtattttatatt
attgtgactcttg

gaattccagaattctattatagtaaatattattataaatataatttctta
cattgaaatttgagatatttaaaaaacctaaaaaccaaccaactatgatt
ttaaattatttaacacctttaaaagatgttaagcaaaaataacactgata
tttttacacattaaatttagtgtttattatcatgtgttacatgtgttcag
agagtagaggcatgaatgtcgtaaacagaaatgacaagcataatagagaa
gcaagaaatggcaaacattaaccagctatgaattttgtcaattcaatgta
ctagaaagaataatataattttacaaaacatattaagaacaagacagaat
aaaatatgttttgtgttttatgtgaaattgttggaagatattttatgaaa
atgaagactttttaaatattaaatgtaatataaatgtcatgtggtataat
gttgatttcaggataatcagtatttttgagaactatagatcttaggtaag
tgtaaaagagtaagaacaatgaaagacaacagtgaatataaaggttatta
atgatatatcctataattagtgcaaaactgtacaaatacataatatcaaa
gaaaaatataaaatgagagaataaaattaaaaaaataatttaaaagtgac
tacaaaatttctccaatatttcatgatgctacggatccagaaaatagtga
ctggaataaattgccaacacaaatctactctagaatcttaaaagtccaga
aagtcaaagattggaaaaataacttaaaaaaaaaataagagtgaaaagat
ccctggaggaataaatcctccgaaactgtttctgaattcttgctggaaag
tatataagcaagaacatagagatgagaaatgctttaagtgttgcaaaaac
ccaaaatatagcctagaaattttgtatcctgtgaattatgtttcaaagca
agagagaaaaaatacttttcttcaaaataaatcccagatatctgtcagtt
gatgtgttttttgtgaaaaagatttaagcacagcattcaaaaagaaacct
gtatgcataagctatatattataggatatatatagacca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_112540313_112541399
seq2: B6Ng01-345E08.g_65_1153

seq1  GAATTCCAGAATTCTATTATAGTAAATATTATTATAAATATAATTTCTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGAATTCTATTATAGTAAATATTATTATAAATATAATTTCTTA  50

seq1  CATTGAAATTTGAGATATTTAAAAAACCTAAAAACCAACCAACTATGATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGAAATTTGAGATATTTAAAAAACCTAAAAACCAACCAACTATGATT  100

seq1  TTAAATTATTTAACACCTTTAAAAGATGTTAAGCAAAAATAACACTGATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATTATTTAACACCTTTAAAAGATGTTAAGCAAAAATAACACTGATA  150

seq1  TTTTTACACATTAAATTTAGTGTTTATTATCATGTGTTACATGTGTTCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTACACATTAAATTTAGTGTTTATTATCATGTGTTACATGTGTTCAG  200

seq1  AGAGTAGAGGCATGAATGTCGTAAACAGAAATGACAAGCATAATAGAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTAGAGGCATGAATGTCGTAAACAGAAATGACAAGCATAATAGAGAA  250

seq1  GCAAGAAATGGCAAACATTAACCAGCTATGAATTTTGTCAATTCAATGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGAAATGGCAAACATTAACCAGCTATGAATTTTGTCAATTCAATGTA  300

seq1  CTAGAAAGAATAATATAATTTTACAAAACATATTAAGAACAAGACAGAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAAAGAATAATATAATTTTACAAAACATATTAAGAACAAGACAGAAT  350

seq1  AAAATATGTTTTGTGTTTTATGTGAAATTGTTGGAAGATATTTTATGAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATATGTTTTGTGTTTTATGTGAAATTGTTGGAAGATATTTTATGAAA  400

seq1  ATGAAGACTTTTTAAATATTAAATGTAATATAAATGTCATGTGGTATAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGACTTTTTAAATATTAAATGTAATATAAATGTCATGTGGTATAAT  450

seq1  GTTGATTTCAGGATAATCAGTATTTTTGAGAACTATAGATCTTAGGTAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGATTTCAGGATAATCAGTATTTTTGAGAACTATAGATCTTAGGTAAG  500

seq1  TGTAAAAGAGTAAGAACAATGAAAGACAACAGTGAATATAAAGGTTATTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAAAGAGTAAGAACAATGAAAGACAACAGTGAATATAAAGGTTATTA  550

seq1  ATGATATATCCTATAATTAGTGCAAAACTGTACAAATACATAATATCAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATATATCCTATAATTAGTGCAAAACTGTACAAATACATAATATCAAA  600

seq1  GAAAAATATAAAATGAGAGAATAAAATTAAAAAAATAATTTAAAAGTGAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAATATAAAATGAGAGAATAAAATTAAAAAAATAATTTAAAAGTGAC  650

seq1  TACAAAATTTCTCCAATATTTCATGATGCTACGGATCCAGAAAATAGTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAAATTTCTCCAATATTTCATGATGCTACGGATCCAGAAAATAGTGA  700

seq1  CTGGAATAAATTGCCAACACAAATCTACTCTAGAATCTTAAAAGTCCAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAATAAATTGCCAACACAAATCTACTCTAGAATCTTAAAAGTCCAGA  750

seq1  AAGTCAAAGATTGGAAAAATAACTT-AAAAAAAAATAAGAGTGAAAAGAT  799
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  AAGTCAAAGATTGGAAAAATAACTTAAAAAAAAAATAAGAGTGAAAAGAT  800

seq1  CCCTGGAGGAATAAATCCTCCGAAACTGTTTCTGAATTCTTGCTGGAAAG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGGAGGAATAAATCCTCCGAAACTGTTTCTGAATTCTTGCTGGAAAG  850

seq1  TATATAAGCAAGAACATAGAGATGAGAAATGCTTTAAGTGTTGCAAAAA-  898
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TATATAAGCAAGAACATAGAGATGAGAAATGCTTTAAGTGTTGCAAAAAC  900

seq1  CCAAAATATAGCCTAG-AATTTTGTATCCTGTGAATTATGTTTCAAAGCA  947
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  CCAAAATATAGCCTAGAAATTTTGTATCCTGTGAATTATGTTTCAAAGCA  950

seq1  AGAGAG-AAAAATACTTT--CTCAAAATAAATCCAAGATATCTGTCAGTT  994
      |||||| |||||||||||   ||||||||||||| |||||||||||||||
seq2  AGAGAGAAAAAATACTTTTCTTCAAAATAAATCCCAGATATCTGTCAGTT  1000

seq1  GATGTG--TTTTGTGAAAAAGATTAAAGCACAGCATTCAAAAAGAAAACC  1042
      ||||||  |||||||||||||||| ||||||||||||||||||| |||||
seq2  GATGTGTTTTTTGTGAAAAAGATTTAAGCACAGCATTCAAAAAG-AAACC  1049

seq1  TGTATGCATTAAAGCTAATAATATATAGGATAATATAATAGACAA  1087
      |||||||||  ||||| |||   |||||||| |||| |||||| |
seq2  TGTATGCAT--AAGCT-ATATATTATAGGAT-ATAT-ATAGACCA  1089


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