BAC Information

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BAC

Clone NameB6Ng01-345L07
Chromosome14 (Build37)
Map Location 106,550,382 - 106,551,532
singlet/doubletsinglet
Overlap genenone
Upstream geneRbm26, LOC621103, LOC100043466, Ndfip2, LOC620376, LOC100043469, Spry2, EG621364, LOC212084, Trim52
Downstream geneLOC100043807, LOC100043476, LOC100043809, LOC668736, EG668738, EG668739, LOC621487, EG668743, LOC100043811, LOC621499, LOC100043814, EG668742, LOC668748
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-345L07.bB6Ng01-345L07.g
ACCGA127817GA127818
length1,1731,143
definitionB6Ng01-345L07.b B6Ng01-345L07.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatacctaaacatgataaaagcaatctacagcaaacca
gtagccaacatcaaagtaaatggagagaagctggaagcaatcccactaaa
atcagggactagacaaggctgcccactttctccctaccttttcaacatag
tacttgaagtattagccagagcaattcgacaacaaaaggagatcaagggg
atacaaattggaaaagaggaagtcaaaatatcactttttgcagatgatat
gatagtatatataagtgaccctaaaaattccaccagagaactcctaaacc
tgataaacagcttcggtgaagtagctggatataaaattaactcaaacaag
tcaatggcctttctctacacaaagaataaacaggctgagaaagaaattag
ggaaacaacacccttctcaatagtcacaaataatataaaatatctcggcg
tgactctaactaaggaagtgaaagatctgtatgataaaaacttcaagtct
ctgaagaaagaaattaaagaagatctcagaagatggaaagatctcccatg
ctcatggattggcaggatcaatattgtaaaaatggctatcttgccaaaag
caatctacagattcaatgcaatccccatcaaaattccaactcaattcttc
aatgaattagaaggagcaatttgcaaattcatctggaataacaaaaaacc
taggatagcaaaaactcttctcaaggataaaagaacctctggtggaatca
ccatgccggacctaaagctttactacagagcaattgtggtaaaaactgca
tggtactggtatagagacagacaagtagaccaatggaatagaattgaaga
cccagaaatgaacccacacacctatggtcacttgatcttcgacaagggag
ctaaaaccatccagtggaagaaagacagcattttcaacaaatggtgctgg
cacaactggtttgttatcatgtagaagaatgcgatcgatccatacttatc
tccttgtactaaggtcaaatctaatggatcaaaagaactttcacataaaa
cagagacactgaactatagagagaaagtggggaaagcttgagattggcac
aggggaaaatcttgaacgaacgcaatggcttgtgctgttagattcgagaa
attgaacaaaaatggggaaccta
gaattcaatatctgaggtgagactgataattaaatgaagtaaaaagtaat
gctttgagtgaataaaatgctgaatttaaatatctctgcccttggtaaat
ttagtgagaaatttcttagtgttgtcatcacactttaggttttaactctg
gaaaaccgagtgcacttggaattaggccactgctcagttttgtgcttcta
ggttttgtaaattggagcacatattgaatttcagagttcccaagccaaaa
atatataaaaaactacatatgctcttttctagtgaaaaaacaaagtgatc
tccagtggagagggactccctcttccgaatttttctgcaaaatgagttat
ttatatatgagctcagaaccactgccaaaaaggtggtcataatgtattct
gtcaatattttttcttttgttaagattattgttatgcttaaaggaacata
aattgtgtttattgcctttaagtattcatgcagattcatattaacatctt
catgttttgttgtcataatttatagattggaattatgagcttctataata
tatggtcaaccagttcactccgtaaatataaactagagtcagccaagcca
tcagaatgaagatagccgagtcaaggtaggttgttttgaaagtagactag
ctgctagcagatgagagttgtgttcttttagaaaaggacagattacctct
aggataattacagtagtctaattacatcatcaagcagtttttttttcctg
tactattatagaggcatctaaattgaagatttgtggactgaatatctgtg
cctgttcaagttctttattattctcacaagtttatatgatcttatgacaa
gtttataaacagaaaattcaaaattattaggtattacattggctgcctgc
aggataatgtgagaaaacttaaatacaatcaggaaaagattttcctttta
gatatgttattttttgtcaagaatgaagtagtctatttatgagaagtcag
tgtagataggaaattgcatctgattattttttttgtgtatataacagtgt
ggcatattttaaatatccagtagaaacatgaaaggcagagatgaatgtac
tatgattgattggaatgagaggcaatttgaaatgttacattct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_106550382_106551532
seq2: B6Ng01-345L07.g_66_1208

seq1  GAATTCAATATCTGAGGTGAGACTGATAATTAAATGAAGTAAAAAGTAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATATCTGAGGTGAGACTGATAATTAAATGAAGTAAAAAGTAAT  50

seq1  GCTTTGAGTGAATAAAATGCTGAATTTAAATATCTCTGCCCTTGGTAAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTGAGTGAATAAAATGCTGAATTTAAATATCTCTGCCCTTGGTAAAT  100

seq1  TTAGTGAGAAATTTCTTAGTGTTGTCATCACACTTTAGGTTTTAACTCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTGAGAAATTTCTTAGTGTTGTCATCACACTTTAGGTTTTAACTCTG  150

seq1  GAAAACCGAGTGCACTTGGAATTAGGCCACTGCTCAGTTTTGTGCTTCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACCGAGTGCACTTGGAATTAGGCCACTGCTCAGTTTTGTGCTTCTA  200

seq1  GGTTTTGTAAATTGGAGCACATATTGAATTTCAGAGTTCCCAAGCCAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTGTAAATTGGAGCACATATTGAATTTCAGAGTTCCCAAGCCAAAA  250

seq1  ATATATAAAAAACTACATATGCTCTTTTCTAGTGAAAAAACAAAGTGATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATAAAAAACTACATATGCTCTTTTCTAGTGAAAAAACAAAGTGATC  300

seq1  TCCAGTGGAGAGGGACTCCCTCTTCCGAATTTTTCTGCAAAATGAGTTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGTGGAGAGGGACTCCCTCTTCCGAATTTTTCTGCAAAATGAGTTAT  350

seq1  TTATATATGAGCTCAGAACCACTGCCAAAAAGGTGGTCATAATGTATTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATATGAGCTCAGAACCACTGCCAAAAAGGTGGTCATAATGTATTCT  400

seq1  GTCAATATTTTTTCTTTTGTTAAGATTATTGTTATGCTTAAAGGAACATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAATATTTTTTCTTTTGTTAAGATTATTGTTATGCTTAAAGGAACATA  450

seq1  AATTGTGTTTATTGCCTTTAAGTATTCATGCAGATTCATATTAACATCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGTGTTTATTGCCTTTAAGTATTCATGCAGATTCATATTAACATCTT  500

seq1  CATGTTTTGTTGTCATAATTTATAGATTGGAATTATGAGCTTCTATAATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTTTTGTTGTCATAATTTATAGATTGGAATTATGAGCTTCTATAATA  550

seq1  TATGGTCAACCAGTTCACTCCGTAAATATAAACTAGAGTCAGCCAAGCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGTCAACCAGTTCACTCCGTAAATATAAACTAGAGTCAGCCAAGCCA  600

seq1  TCAGAATGAAGATAGCCGAGTCAAGGTAGGTTGTTTTGAAAGTAGACTAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAATGAAGATAGCCGAGTCAAGGTAGGTTGTTTTGAAAGTAGACTAG  650

seq1  CTGCTAGCAGATGAGAGTTGTGTTCTTTTAGAAAAGGACAGATTACCTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTAGCAGATGAGAGTTGTGTTCTTTTAGAAAAGGACAGATTACCTCT  700

seq1  AGGATAATTACAGTAGTCTAATTACATCATCAAGCAGTTTTTTTTTCCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATAATTACAGTAGTCTAATTACATCATCAAGCAGTTTTTTTTTCCTG  750

seq1  TACTATTATAGAGGCATCTAAATTGAAGATTTGTGGACTGAATATCTGTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTATTATAGAGGCATCTAAATTGAAGATTTGTGGACTGAATATCTGTG  800

seq1  CCTGTTCAAGTTCTTTATTATTCTCACAAGTTTATATGATCTTATGACAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTTCAAGTTCTTTATTATTCTCACAAGTTTATATGATCTTATGACAA  850

seq1  GTTTATAAACAGAAAATTCAAAATTATTAGGTATTACATTGGCTGCCTGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATAAACAGAAAATTCAAAATTATTAGGTATTACATTGGCTGCCTGC  900

seq1  AGGATAATGTGAGAAAACTTAAATACAATCAGG-AAAGA-TTTCCTTTTA  948
      ||||||||||||||||||||||||||||||||| ||||| ||||||||||
seq2  AGGATAATGTGAGAAAACTTAAATACAATCAGGAAAAGATTTTCCTTTTA  950

seq1  GATATGTTA-TTTTTGTCAAGAATGAAGTAGTCTATTTATGAGAAGTCAG  997
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  GATATGTTATTTTTTGTCAAGAATGAAGTAGTCTATTTATGAGAAGTCAG  1000

seq1  TGTAAGAATAGGAAATTGCCATCTGATTA-TTTTTTTGTGTATTATAACA  1046
      ||||   ||||||||||| |||||||||| |||||||||||| |||||||
seq2  TGTA--GATAGGAAATTG-CATCTGATTATTTTTTTTGTGTA-TATAACA  1046

seq1  GTGTTGCATATTTTAAATATTCAGTAGAAACAATTGAAAAGGAAGAGATG  1096
      |||| ||||||||||||||| |||||||||||  || ||||| |||||||
seq2  GTGTGGCATATTTTAAATATCCAGTAGAAACA--TG-AAAGGCAGAGATG  1093

seq1  ATGTTAATTTTTTAATTGATTGGGAATGGAGAGGGATTTTAAAATGTTAA  1146
      |   ||    | | ||||||| ||||| |||||| | ||| |||||||| 
seq2  AATGTA---CTATGATTGATT-GGAAT-GAGAGGCAATTTGAAATGTTAC  1138

seq1  ATTCT  1151
      |||||
seq2  ATTCT  1143