BAC Information

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BAC

Clone NameB6Ng01-346D02
Chromosome19 (Build37)14 (Build37)
Map Location 14,102,714 - 14,103,81924,919,613 - 24,919,651
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneOlfr1453, Olfr1454, Olfr1455-ps1, Olfr1456-ps1, Olfr1457, EG667271, Olfr1459, Olfr1460-ps1, Olfr1461, Olfr1462, Olfr1463, LOC667300, Olfr1465, Olfr1466, Olfr1467, Olfr1468-ps1, Olfr1469, Olfr1470-ps1, Olfr1471, GA_x5J8B7W6KF8-5605544-5605301, Olfr1472, Olfr1473-ps1, Olfr1474, Olfr1475, GA_x5J8B7W6KF8-5563315-5562883, Olfr1477, GA_x5J8B7W6KF8-5546505-5545716, GA_x5J8B7W6KF8-5539992-5539494, LOC100041185, Olfr1480, GA_x5J8B7W6KF8-5515896-5515561, GA_x5J8B7W6KF8-5488050-5488655, Olfr1483-ps1, Olfr1484, GA_x5J8B7W6KF8-5463415-5462623, Olfr1486-ps1, LOC671653, Olfr1487, GA_x5J8B7W6KF8-5425983-5425664, Olfr1489, Olfr1490, Olfr1491, Olfr1492-ps1, Olfr1493-ps1, Olfr1494, Olfr1495, Olfr1496, Olfr1497, Olfr1498-ps1, Olfr1499, Olfr1500, Olfr1501, Olfr1502, Olfr1503-ps1, Olfr1504, Olfr1505
Downstream geneEG667433, Tle4, EG433225
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-346D02.bB6Ng01-346D02.g
ACCGA128156GA128157
length1,101423
definitionB6Ng01-346D02.b B6Ng01-346D02.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(14,102,714 - 14,103,819)(24,919,613 - 24,919,651)
sequence
gaattcctttgtcctttagctttgctcacaatgctgaagtcaaaagtaaa
aacatgttatgagtgtgacttggcttcattgttcatgccttaggccccct
tattcatgggtgtgaaatggagagcactctgtaaagcaaggatccatgga
gtagaggcagggtacaagaaaagtaaacttagaaaatgcacttacgtgtg
cttttgctttcttctacctctctgtaatccatgtgaattgtgtatggaat
atgaatttagcatcccaatttatctttctccactgcagttcatcctgtcc
actttaaggctagctaatccctggaatatacttttgttttggtttagttt
ggtttggtttttttcgagacagggtttctctgtgtagccctggctgtcct
ggaactcactctgtagaccagcctggccttgaactcagaaatctgcctgt
ctctgtctcccaagtgctgggattaaaggtgtgtaccactgcccggctct
ggaatatacttgatgtccaaattgactactgtgtttcaaattctattggg
aaaattgtgaaatagctaatttaaatgttacattatgatgaaatgatgat
gttttggttacatttgaatataattgagataaaatagatcattgagattt
atgtcatcttctttgtaaaaagtgcatggaatatcaaagccacacatgtg
gcttgcattgcattgcagctgtacagcactgatgtatagagctgatgtgg
cggcacctctactggagacctaagaggtgttaatcaattattcttcttac
cacagaaggctactttagttctttactccttcattaatcaagttgtaaac
ctccttttctgaaatatatatatattaattgcaattactcaaacaagaat
agccccagcattttcactgtgtgaacagatttacagaatagttaattatg
aatgatacatctaagtgtaacattgaacaactcgtgaagaacatgtctcc
ccttagaacattttctttgatactcttctatagtatttttttctccatca
tatggtattttttttctagcctaaattctatctacaaccagtttatctgt
a
aagcatattctctactttcttttctgtcagattcaggatatctggactta
tgttgaggtccttgattcatttaaagttgattcatttaaagttggtgata
agtatgtatctactttccttctttaacatgcagctctctggtatgactag
catcattgatcaaagattctgtcttttctttagtgtgtatttttgtgggt
atttatttgtttaaaaaattaggtatcctaagagtttgaaattatcctca
attatatttcattctttaaaatgcatgtcttcacaacagtcccattctgt
ctttattactgtagctctgcaatatcatttgaaatctagaatagagagtt
ctcaagtagttcttttattattcaggatttttttagatgtgtgtgtgtgt
gtgtgtgtgtgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_14102714_14103819
seq2: B6Ng01-346D02.b_42_1142

seq1  GAATTCCTTTGTCCTTTAGCTTTGCTCACAATGCTGAAGTCAAAAGTAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTTGTCCTTTAGCTTTGCTCACAATGCTGAAGTCAAAAGTAAA  50

seq1  AACATGTTATGAGTGTGACTTGGCTTCATTGTTCATGCCTTAGGCCCCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATGTTATGAGTGTGACTTGGCTTCATTGTTCATGCCTTAGGCCCCCT  100

seq1  TATTCATGGGTGTGAAATGGAGAGCACTCTGTAAAGCAAGGATCCATGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCATGGGTGTGAAATGGAGAGCACTCTGTAAAGCAAGGATCCATGGA  150

seq1  GTAGAGGCAGGGTACAAGAAAAGTAAACTTAGAAAATGCACTTACGTGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAGGCAGGGTACAAGAAAAGTAAACTTAGAAAATGCACTTACGTGTG  200

seq1  CTTTTGCTTTCTTCTACCTCTCTGTAATCCATGTGAATTGTGTATGGAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGCTTTCTTCTACCTCTCTGTAATCCATGTGAATTGTGTATGGAAT  250

seq1  ATGAATTTAGCATCCCAATTTATCTTTCTCCACTGCAGTTCATCCTGTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATTTAGCATCCCAATTTATCTTTCTCCACTGCAGTTCATCCTGTCC  300

seq1  ACTTTAAGGCTAGCTAATCCCTGGAATATACTTTTGTTTTGGTTTAGTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTAAGGCTAGCTAATCCCTGGAATATACTTTTGTTTTGGTTTAGTTT  350

seq1  GGTTTGGTTTTTTTCGAGACAGGGTTTCTCTGTGTAGCCCTGGCTGTCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTGGTTTTTTTCGAGACAGGGTTTCTCTGTGTAGCCCTGGCTGTCCT  400

seq1  GGAACTCACTCTGTAGACCAGCCTGGCCTTGAACTCAGAAATCTGCCTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACTCACTCTGTAGACCAGCCTGGCCTTGAACTCAGAAATCTGCCTGT  450

seq1  CTCTGTCTCCCAAGTGCTGGGATTAAAGGTGTGTACCACTGCCCGGCTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTCTCCCAAGTGCTGGGATTAAAGGTGTGTACCACTGCCCGGCTCT  500

seq1  GGAATATACTTGATGTCCAAATTGACTACTGTGTTTCAAATTCTATTGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATATACTTGATGTCCAAATTGACTACTGTGTTTCAAATTCTATTGGG  550

seq1  AAAATTGTGAAATAGCTAATTTAAATGTTACATTATGATGAAATGATGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTGTGAAATAGCTAATTTAAATGTTACATTATGATGAAATGATGAT  600

seq1  GTTTTGGTTACATTTGAATATAATTGAGATAAAATAGATCATTGAGATTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGGTTACATTTGAATATAATTGAGATAAAATAGATCATTGAGATTT  650

seq1  ATGTCATCTTCTTTGTAAAAAGTGCATGGAATATCAAAGCCACACATGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCATCTTCTTTGTAAAAAGTGCATGGAATATCAAAGCCACACATGTG  700

seq1  GCTTGCATTGCATTGCAGCTGTACAGCACTGATGTATAGAGCTGATGTGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGCATTGCATTGCAGCTGTACAGCACTGATGTATAGAGCTGATGTGG  750

seq1  CGGCACCTCTACTGGAGACCTAAGAGGTGTTAATCAATTATTCTTCTTAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCACCTCTACTGGAGACCTAAGAGGTGTTAATCAATTATTCTTCTTAC  800

seq1  CACAGAAGGCTACTTTAGTTCTTTACTCCTTCATTAATCAAGTTGTAAAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGAAGGCTACTTTAGTTCTTTACTCCTTCATTAATCAAGTTGTAAAC  850

seq1  CTCCTTTTCTGAAATATATATATATTAATTGCAATTACTCAAACAAGAAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTTTCTGAAATATATATATATTAATTGCAATTACTCAAACAAGAAT  900

seq1  AGCCCCAGCATTTTCACTGTGTGAACAGATTTACAGAATAGTTAATTATG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCCAGCATTTTCACTGTGTGAACAGATTTACAGAATAGTTAATTATG  950

seq1  AATGATACATCTAAGTGTAACATTGAACAACTCGTGAAGAACATGTCTCC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATACATCTAAGTGTAACATTGAACAACTCGTGAAGAACATGTCTCC  1000

seq1  CCTTAGAAACAATTTTTCTTTGATACTCTTCTATAGTA-TTTTTTCTCCA  1049
      |||||| ||||  ||||||||||||||||||||||||| |||||||||||
seq2  CCTTAG-AACA--TTTTCTTTGATACTCTTCTATAGTATTTTTTTCTCCA  1047

seq1  TCCATAATGGTA-TTTTTTTCTAAGCTAAATTCTAATCTACAAACAAGTG  1098
      | ||| |||||| ||||||||||  ||||||||| |||||| ||| ||| 
seq2  T-CAT-ATGGTATTTTTTTTCTAGCCTAAATTCT-ATCTAC-AACCAGTT  1093

seq1  TATCTGTA  1106
      ||||||||
seq2  TATCTGTA  1101

seq1: chr14_24919613_24919651
seq2: B6Ng01-346D02.g_453_491 (reverse)

seq1  CACACACACACACACACACACACACACACACACACATCT  39
      |||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACACACACACATCT  39