BAC Information

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BAC

Clone NameB6Ng01-346J07
Chromosome14 (Build37)
Map Location 70,934,644 - 71,019,143
singlet/doubletdoublet
Overlap geneLgi3, Reep4, Hr, Nudt18, Rai16, Epb4.9
Upstream geneEntpd4, Loxl2, R3hcc1, Chmp7, Tnfrsf10b, Rhobtb2, LOC100043701, 1700081D17Rik, LOC668397, Egr3, Bin3, 2610301G19Rik, 9930012K11Rik, Pdlim2, Sorbs3, Ppp3cc, LOC100043115, Slc39a14, EG668450, Piwil2, Polr3d, Phyhip, Bmp1, Sftpc
Downstream geneFgf17, Npm2, Xpo7, LOC668443, Dok2, Gfra2, LOC100043132, LOC100043136
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-346J07.bB6Ng01-346J07.g
ACCGA128437GA128438
length1,1261,144
definitionB6Ng01-346J07.b B6Ng01-346J07.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(71,018,015 - 71,019,143)(70,934,644 - 70,935,797)
sequence
gaattcaaagcaatcctcctgcgtcagcctcccaagtgctaggatgtgca
gagtgtaaatgacttacccaccacatcggagtaatagtcactgcttaagg
ccaggcaggcatcccggcttgagaggtcttgcttgaaaccaccacaccat
cctcctttcccttctgtacacagctctcctcagtctgtggctgaggactg
ggagaagggaaaggaggagagctgagggcgtggccaagaaggagaggaca
tggactgtagccatcacctagtacatagactggcctatcctagggacaga
cagtgtgaaaggtgaccaagcagccctcatagagcagtgtgacagcccct
gagaatgctctgggcactttgtggtggcagaggtattttacagtgtctac
atagcatactgcctgcctgtagggaacagaaaaggcaagtgcgctcgcta
gcttcgggggggaccaccagcagctcttggtcatgcccatagcttcacca
ccccaaccgatccccgtgggttttcttcctcgggcctctggctccctgtg
cttccagtcttagctaatgactcaatgtccccgtgttaaccttctgggga
aaataaagatttggctgagcaaactctggggagtgaaaccagtggctgga
gtgggaggggccagcaccacttgggagagggcccgggccagagcagggcc
agggcaggggtgacaagcttgaggatatagccgtctgtccaccctgggat
gccagctgacccctgccgtcatttcctctgaagccagagaacaatggctg
aaaaaacaagtgcagccgactcacgcagccaccgcctggccacatgcacg
cacaactccctggggctgaactcagcgccgcggaacctgacagcctaacg
ccctttactggggctcactgtccttccagccacccgcggtcagcagccca
gagaggcccaaggatgaggacaccacagagtcgctgtgacgccctcgctg
caggagccgggccgagcctgacgttctgtcctctccaagtgcgcaccggc
cccgagggagcggcgtcagtgcttgccgcatggaacgtctgcagaggtga
gcgcttgcacccgggccaagggtggg
gaattccaggtacctaggtgtggcctgcctctgctggtcctatcctgcag
ggaaggcgataggaggctcttttgtctaactccagtcaattcctaaagga
agaggaagggatgaaaagtggtttctgcctataaggaattcataacaaat
gaacactttgaaccaattctagccctgacacacatcaatacacctatttt
ataacataaattaaaacattttagctgggcagtggtggtgcacaccttta
atcccagcacttgggaggcagaggcaggtggatttctgagtttgaggcca
gcctggtctacagagtgagttccgggacagccagggctacacagagaaac
cctgtctcgaaaaaccaaaataataaaataataaataaataaataaataa
ataaataaataaataaatgggctggtgagatggctcagcagttaggagca
ctgactgctcttctgaaggtcctgagttcaaatcccagcaaccacatggt
ggctcacaaccatctgtaatgagacctgatgccctctcctggtgtgtctg
aatacagctacagtgtacttacatataacaataaataaatcttaaaaaaa
atacacataaagtgaattaatttataaataaatgaaacatttaactgaaa
aaatattggagaaagaaactatcctaccaggattatcctattctttgaag
aaggccagtatatacaaaataatatctataatgtacatgccttaacccca
gcatttgggaggcaagacaggcaggtttctgtgagtttaaaggtcagcca
gatctgcataatagaaagactccacctctaaataaataaataaataaact
aaccaacaaacgaatttatttaattaagtaagtaattgaatactgagagc
tagggataaagcccagttggtagaattgcttgcctagcgtgcacaaagcc
ctcggttcatgattgttcaaacctatatcccagtatttcagagatgaagg
caggaatcttggagagttcaagacagacttgactatatagtgatacgtct
caggatagattaacaagcaaagcttacagtatggtggctcacacttggat
ccgagcactttgggaatgcagcgaagaatgatcgtgcaggttca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_71018015_71019143
seq2: B6Ng01-346J07.b_45_1170 (reverse)

seq1  CCCACCCTGGCCCGGGGTGCAAGCCGCTCACCTTCTGCAGACGTTCCATG  50
      |||||||| | || ||||||||| |||||||| |||||||||||||||||
seq2  CCCACCCTTGGCCCGGGTGCAAG-CGCTCACC-TCTGCAGACGTTCCATG  48

seq1  CGGCAGCCACTGGCCGGCCGCTCCCTCGGGGGCCGGTGCGCACTTGGAGA  100
      |||||  ||||| |  ||||||||||| ||||||||||||||||||||||
seq2  CGGCAAGCACTGAC--GCCGCTCCCTC-GGGGCCGGTGCGCACTTGGAGA  95

seq1  GGACAG-ACGTCAGGCTCGGCCCGGCTCCTGCAGCGAGGGCGTCACAGCG  149
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAGAACGTCAGGCTCGGCCCGGCTCCTGCAGCGAGGGCGTCACAGCG  145

seq1  -CTCTGTGGTGTCCTCATCCCTTGGGCCTCTCTGGGCTGCTGACCGCGGG  198
       ||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  ACTCTGTGGTGTCCTCAT-CCTTGGGCCTCTCTGGGCTGCTGACCGCGGG  194

seq1  TGGCTGGAAGGACAGTGAGCCCCAGT-AAGGGCGTTAGGCTGTCAGGTTC  247
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TGGCTGGAAGGACAGTGAGCCCCAGTAAAGGGCGTTAGGCTGTCAGGTTC  244

seq1  CGCGGCGCTGAGTTCAGCCCCAGGGAGTTGTGCGTGCATGTGGCCAGGCG  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCGGCGCTGAGTTCAGCCCCAGGGAGTTGTGCGTGCATGTGGCCAGGCG  294

seq1  GTGGCTGCGTGAGTCGGCTGCACTTGTTTTTTCAGCCATTGTTCTCTGGC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCTGCGTGAGTCGGCTGCACTTGTTTTTTCAGCCATTGTTCTCTGGC  344

seq1  TTCAGAGGAAATGACGGCAGGGGTCAGCTGGCATCCCAGGGTGGACAGAC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGAGGAAATGACGGCAGGGGTCAGCTGGCATCCCAGGGTGGACAGAC  394

seq1  GGCTATATCCTCAAGCTTGTCACCCCTGCCCTGGCCCTGCTCTGGCCCGG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTATATCCTCAAGCTTGTCACCCCTGCCCTGGCCCTGCTCTGGCCCGG  444

seq1  GCCCTCTCCCAAGTGGTGCTGGCCCCTCCCACTCCAGCCACTGGTTTCAC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTCTCCCAAGTGGTGCTGGCCCCTCCCACTCCAGCCACTGGTTTCAC  494

seq1  TCCCCAGAGTTTGCTCAGCCAAATCTTTATTTTCCCCAGAAGGTTAACAC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCAGAGTTTGCTCAGCCAAATCTTTATTTTCCCCAGAAGGTTAACAC  544

seq1  GGGGACATTGAGTCATTAGCTAAGACTGGAAGCACAGGGAGCCAGAGGCC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGACATTGAGTCATTAGCTAAGACTGGAAGCACAGGGAGCCAGAGGCC  594

seq1  CGAGGAAGAAAACCCACGGGGATCGGTTGGGGTGGTGAAGCTATGGGCAT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGGAAGAAAACCCACGGGGATCGGTTGGGGTGGTGAAGCTATGGGCAT  644

seq1  GACCAAGAGCTGCTGGTGGTCCCCCCCGAAGCTAGCGAGCGCACTTGCCT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAAGAGCTGCTGGTGGTCCCCCCCGAAGCTAGCGAGCGCACTTGCCT  694

seq1  TTTCTGTTCCCTACAGGCAGGCAGTATGCTATGTAGACACTGTAAAATAC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGTTCCCTACAGGCAGGCAGTATGCTATGTAGACACTGTAAAATAC  744

seq1  CTCTGCCACCACAAAGTGCCCAGAGCATTCTCAGGGGCTGTCACACTGCT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCCACCACAAAGTGCCCAGAGCATTCTCAGGGGCTGTCACACTGCT  794

seq1  CTATGAGGGCTGCTTGGTCACCTTTCACACTGTCTGTCCCTAGGATAGGC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGAGGGCTGCTTGGTCACCTTTCACACTGTCTGTCCCTAGGATAGGC  844

seq1  CAGTCTATGTACTAGGTGATGGCTACAGTCCATGTCCTCTCCTTCTTGGC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCTATGTACTAGGTGATGGCTACAGTCCATGTCCTCTCCTTCTTGGC  894

seq1  CACGCCCTCAGCTCTCCTCCTTTCCCTTCTCCCAGTCCTCAGCCACAGAC  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGCCCTCAGCTCTCCTCCTTTCCCTTCTCCCAGTCCTCAGCCACAGAC  944

seq1  TGAGGAGAGCTGTGTACAGAAGGGAAAGGAGGATGGTGTGGTGGTTTCAA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGAGAGCTGTGTACAGAAGGGAAAGGAGGATGGTGTGGTGGTTTCAA  994

seq1  GCAAGACCTCTCAAGCCGGGATGCCTGCCTGGCCTTAAGCAGTGACTATT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGACCTCTCAAGCCGGGATGCCTGCCTGGCCTTAAGCAGTGACTATT  1044

seq1  ACTCCGATGTGGTGGGTAAGTCATTTACACTCTGCACATCCTAGCACTTG  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCGATGTGGTGGGTAAGTCATTTACACTCTGCACATCCTAGCACTTG  1094

seq1  GGAGGCTGACGCAGGAGGATTGCTTTGAATTC  1129
      ||||||||||||||||||||||||||||||||
seq2  GGAGGCTGACGCAGGAGGATTGCTTTGAATTC  1126

seq1: chr14_70934644_70935797
seq2: B6Ng01-346J07.g_69_1212

seq1  GAATTCCAGGTACCTAGGTGTGGCCTGCCTCTGCTGGTCCTATCCTGCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGTACCTAGGTGTGGCCTGCCTCTGCTGGTCCTATCCTGCAG  50

seq1  GGAAGGCGATAGGAGGCTCTTTTGTCTAACTCCAGTCAATTCCTAAAGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGGCGATAGGAGGCTCTTTTGTCTAACTCCAGTCAATTCCTAAAGGA  100

seq1  AGAGGAAGGGATGAAAAGTGGTTTCTGCCTATAAGGAATTCATAACAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGAAGGGATGAAAAGTGGTTTCTGCCTATAAGGAATTCATAACAAAT  150

seq1  GAACACTTTGAACCAATTCTAGCCCTGACACACATCAATACACCTATTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACACTTTGAACCAATTCTAGCCCTGACACACATCAATACACCTATTTT  200

seq1  ATAACATAAATTAAAACATTTTAGCTGGGCAGTGGTGGTGCACACCTTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACATAAATTAAAACATTTTAGCTGGGCAGTGGTGGTGCACACCTTTA  250

seq1  ATCCCAGCACTTGGGAGGCAGAGGCAGGTGGATTTCTGAGTTTGAGGCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCAGCACTTGGGAGGCAGAGGCAGGTGGATTTCTGAGTTTGAGGCCA  300

seq1  GCCTGGTCTACAGAGTGAGTTCCGGGACAGCCAGGGCTACACAGAGAAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGGTCTACAGAGTGAGTTCCGGGACAGCCAGGGCTACACAGAGAAAC  350

seq1  CCTGTCTCGAAAAACCAAAATAATAAAATAATAAATAAATAAATAAATAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTCTCGAAAAACCAAAATAATAAAATAATAAATAAATAAATAAATAA  400

seq1  ATAAATAAATAAATAAATGGGCTGGTGAGATGGCTCAGCAGTTAGGAGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATAAATAAATAAATGGGCTGGTGAGATGGCTCAGCAGTTAGGAGCA  450

seq1  CTGACTGCTCTTCTGAAGGTCCTGAGTTCAAATCCCAGCAACCACATGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACTGCTCTTCTGAAGGTCCTGAGTTCAAATCCCAGCAACCACATGGT  500

seq1  GGCTCACAACCATCTGTAATGAGACCTGATGCCCTCTCCTGGTGTGTCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCACAACCATCTGTAATGAGACCTGATGCCCTCTCCTGGTGTGTCTG  550

seq1  AATACAGCTACAGTGTACTTACATATAACAATAAATAAATCTTAAAAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACAGCTACAGTGTACTTACATATAACAATAAATAAATCTTAAAAAAA  600

seq1  ATACACATAAAGTGAATTAATTTATAAATAAATGAAACATTTAACTGAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACACATAAAGTGAATTAATTTATAAATAAATGAAACATTTAACTGAAA  650

seq1  AAATATTGGAGAAAGAAACTATCCTACCAGGATTATCCTATTCTTTGAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATTGGAGAAAGAAACTATCCTACCAGGATTATCCTATTCTTTGAAG  700

seq1  AAGGCCAGTATATACAAAATAATATCTATAATGTACATGCCTTAACCCCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCCAGTATATACAAAATAATATCTATAATGTACATGCCTTAACCCCA  750

seq1  GCATTTGGGAGGCAAGACAGGCAGGTTTCTGTGAGTTT-AAGGTCAGCCA  799
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  GCATTTGGGAGGCAAGACAGGCAGGTTTCTGTGAGTTTAAAGGTCAGCCA  800

seq1  GATCTGCATAATAGAAAGACTCCACCTCTAAATAAATAAATAAATAAACT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTGCATAATAGAAAGACTCCACCTCTAAATAAATAAATAAATAAACT  850

seq1  AACCAACAAACGAA-TTATTTAATTAAGTAAGTAATTGAATACTGAGAGC  898
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  AACCAACAAACGAATTTATTTAATTAAGTAAGTAATTGAATACTGAGAGC  900

seq1  TAGGGATAAAGCCCAGTTGGTAGAA-TGCTTGCCTAGCGTGCACAAAGCC  947
      ||||||||||||||||||||||||| |||||||||||||||||||||| |
seq2  TAGGGATAAAGCCCAGTTGGTAGAATTGCTTGCCTAGCGTGCACAAAG-C  949

seq1  CCTCGGTTCATGATTGTTCAAACCTATAATCCCAGTATTTCAGAGATGAA  997
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  CCTCGGTTCATGATTGTTCAAACCTAT-ATCCCAGTATTTCAGAGATGAA  998

seq1  GGCAGGAATC-TGGAGAGTTCAAGACCAGACTTGACTATATAGTGATAAC  1046
      |||||||||| |||||||||||||| ||||||||||||||||||||||  
seq2  GGCAGGAATCTTGGAGAGTTCAAGA-CAGACTTGACTATATAGTGATA--  1045

seq1  CGTCTCAAAGAAAAGAATAAAACAAAGCAAAGCTTACCAGGGTATGGTGG  1096
      ||||||  || | ||| |||    |||||||||||||    |||||||||
seq2  CGTCTC--AGGATAGATTAA---CAAGCAAAGCTTAC---AGTATGGTGG  1087

seq1  CTCACACTTGGGATCCAGAGCACTT--GGGATGCAGCGAAAGATGATCGC  1144
      ||||||||| |||||| ||||||||  || ||||||||||  ||||||| 
seq2  CTCACACTT-GGATCC-GAGCACTTTGGGAATGCAGCGAAGAATGATCG-  1134

seq1  TGCAAGTTCA  1154
      |||| |||||
seq2  TGCAGGTTCA  1144