BAC Information

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BAC

Clone NameB6Ng01-347E10
Chromosome14 (Build37)
Map Location 23,687,346 - 23,688,211
singlet/doubletsinglet
Overlap gene1700112E06Rik
Upstream geneZfp503, EG665075, EG435392, LOC665068
Downstream geneKcnma1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-347E10.bB6Ng01-347E10.g
ACCGA128926GA128927
length1,2401,125
definitionB6Ng01-347E10.b B6Ng01-347E10.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctatcagaccttcaaagaggacctaattccaatattcctcaaact
attccactaaatagaaacagaaggtattctacacaatttgttctatgaag
ccacacttactctgatacctaaaccacacaaagacccaacaaagaaagag
aacttcaaaccaaattcccttatgaatatcaatgcaaaaatactcaataa
aattctcaaaaataaaatccaagaacacatcaaaatgatcatccatcatg
atcaagtaggcttcattccagggatgcagggatggttcaatatacagaaa
ttcatcaacgtaatccactatataaacaaactcaaagacaaaaaccacat
gatcatctcattagatgctgagaagggatttgacaaaatctaacacccat
tcatgataaaaatcttggaaagatcaggaattcaaggcccatacctaaat
ataataaaacagtatacagcaaaccaatagccaacatcaaactaaatggt
gagaaactggaagcaatcccactaaaatcagggactggacaggctgccca
ctcactccctacctattcaatatagtacttgtagtcctagccagagcaat
ttgacaacaaaaggagatcaaagggatacaaattggaaaggaagaagtca
aaatatcactatttgcagatgatataatagtgtatataagtgacccccaa
aattccaccagagaattcctaaaccagataaacttcattgaagtagctgg
atataaaattaattcaagcaaaggataaacaggctgaaaaagaaattaga
ggaacatcacccttcacaatagtcacaaataatataaaatacctggctgt
gactctaactaaggaagtgaaagatctgtatgacaagaactttaagtctc
tgaagaaagaaattgaagaagatctcagaagatgggaagatctcccatgc
tcatgggattgctagtattacatagtaaaatggctatcttgccaaatcaa
tctaacagatcaatgcattcccctacaaaattccaacttaaattctcaca
gaagtaaaaggtcaattacaaattcatctgaataacaaaaaacctaggat
agcaaaactatcctcacaataagaaactctggtggtatcaccaatctgaa
ctcagctgtactacagagccatgtctaaatgcatggattgtcattgacga
acgaatccgaaaaaagatcatggaatataattgagaacac

gaattctttgtttagctcgctctgtaccctatttgttaatagggttattt
gattctctggagtccaacttcttgagttctttgtatatattggatattag
ccctctatcagatttaggattggtaaagatcttttcccaatctgttgttt
gcctttttgtcttattgacagtttcctttgccttatagaaactttgctat
tttatgaggtcctatttgtcgattcttgatcttacagcacaagccattgg
tgttctatttaggaattttttttccctgtgcccatatgttcaaggctctt
ccccactttctcctctataagtttcagtatctctggtttatgttgaggtc
cttgatccaccaaaatcccaactcaattcttcgcagagttagaaagggca
atttaaaaattcatcgggaataacaaaatacctaggatagcaaaaactat
tttgaacaataaaagaacttctggtggaatcaccatccctgacctcaagc
tgtactacagagcaattgtgataaaaactgcatggtagtggtacagtgac
agacaggtagatcaatgggatagaattaaagacccagaaatgaacccaca
cacctatggtcacttgatctttgatgaaggagctaaaaccattcagtgga
aaaaagacagcattttcaacaaatggtgctggctcaactggaggttagca
tgtagaagaatgtgaattgatcaattcttatttccttgtatttccatgtc
tttttaatgatttgggtttgttttcattttttgttttgtttgtttgtttg
ggtgtcctgatgagttttcacttgggtttgctcacaggattgtagaggag
gctttagtttacagacctatgggtacctgaaattatggctacaccacttc
ttttccatcaaacattaatcatacttaaatcctaagagaaaggtgggggt
cttcaataagtcttttcctctgtgacagagttgaacaagtccaggctttg
ttgcacgtgatcacaatgtttgtgaattcatgagccatgtagttcctgga
tgtcaacccttctacatccattgcttgtgattctaaatttcctctaccct
accccctttttttcctgcatgtacc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_23687346_23688211
seq2: B6Ng01-347E10.g_316_1195

seq1  ATTGGTGTTCTATTTAGGAATTTTTTTTCCCTGTGCCCATATGTTCAAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGTGTTCTATTTAGGAATTTTTTTTCCCTGTGCCCATATGTTCAAGG  50

seq1  CTCTTCCCCACTTTCTCCTCTATAAGTTTCAGTATCTCTGGTTTATGTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCCCCACTTTCTCCTCTATAAGTTTCAGTATCTCTGGTTTATGTTG  100

seq1  AGGTCCTTGATCCACCAAAATCCCAACTCAATTCTTCGCAGAGTTAGAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCCTTGATCCACCAAAATCCCAACTCAATTCTTCGCAGAGTTAGAAA  150

seq1  GGGCAATTTAAAAATTCATCGGGAATAACAAAATACCTAGGATAGCAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAATTTAAAAATTCATCGGGAATAACAAAATACCTAGGATAGCAAAA  200

seq1  ACTATTTTGAACAATAAAAGAACTTCTGGTGGAATCACCATCCCTGACCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATTTTGAACAATAAAAGAACTTCTGGTGGAATCACCATCCCTGACCT  250

seq1  CAAGCTGTACTACAGAGCAATTGTGATAAAAACTGCATGGTAGTGGTACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCTGTACTACAGAGCAATTGTGATAAAAACTGCATGGTAGTGGTACA  300

seq1  GTGACAGACAGGTAGATCAATGGGATAGAATTAAAGACCCAGAAATGAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACAGACAGGTAGATCAATGGGATAGAATTAAAGACCCAGAAATGAAC  350

seq1  CCACACACCTATGGTCACTTGATCTTTGATGAAGGAGCTAAAACCATTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACACACCTATGGTCACTTGATCTTTGATGAAGGAGCTAAAACCATTCA  400

seq1  GTGGAAAAAAGACAGCATTTTCAACAAATGGTGCTGGCTCAACTGGAGGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAAAAAAGACAGCATTTTCAACAAATGGTGCTGGCTCAACTGGAGGT  450

seq1  TAGCATGTAGAAGAATGTGAATTGATCAATTCTTATTTCCTTGTATTTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCATGTAGAAGAATGTGAATTGATCAATTCTTATTTCCTTGTATTTCC  500

seq1  ATGTCTTTTTAATGATTTGGGTTTGTTTTCATTTTTTG-TTTGTTTGTTT  549
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  ATGTCTTTTTAATGATTTGGGTTTGTTTTCATTTTTTGTTTTGTTTGTTT  550

seq1  GTTTTGGTGTCCTGATGAG-TTTCACTTGGG-TTGCTCACAGGATTGTAG  597
      |||| |||||||||||||| ||||||||||| ||||||||||||||||||
seq2  GTTTGGGTGTCCTGATGAGTTTTCACTTGGGTTTGCTCACAGGATTGTAG  600

seq1  AGGAGGC-TTAGTTTACAGACCTATGGGTACCTGAAA-TATGGCTACACC  645
      ||||||| ||||||||||||||||||||||||||||| ||||||||||||
seq2  AGGAGGCTTTAGTTTACAGACCTATGGGTACCTGAAATTATGGCTACACC  650

seq1  ACT--CTTTCCATCAAACATTAATCATACTTAAATCCTAAGAGAAAGGT-  692
      |||   ||||||||||||||||||||||||||||||||||||||||||| 
seq2  ACTTCTTTTCCATCAAACATTAATCATACTTAAATCCTAAGAGAAAGGTG  700

seq1  GGGGTCT--CATAAGTCTTTTCCTCTGTGACAGGAGTTG-ACAAGTCCAG  739
      |||||||   |||||||||||||||||||||| |||||| ||||||||||
seq2  GGGGTCTTCAATAAGTCTTTTCCTCTGTGACA-GAGTTGAACAAGTCCAG  749

seq1  GCTT--GTGCACGTGATCACAATTGTTGTGAATTCATGAGCCATGTAGTT  787
      ||||   ||||||||||||||||  |||||||||||||||||||||||||
seq2  GCTTTGTTGCACGTGATCACAATGTTTGTGAATTCATGAGCCATGTAGTT  799

seq1  CCTGGATGTCAA-CCTTCTACATCCATTGCTTGTGATTCTTAATTT-CTC  835
      |||||||||||| ||||||||||||||||||||||||||| ||||| |||
seq2  CCTGGATGTCAACCCTTCTACATCCATTGCTTGTGATTCTAAATTTCCTC  849

seq1  TACCCTACCCCCTTTTTTT-CTGCAATGTACC  866
      ||||||||||||||||||| |||| |||||||
seq2  TACCCTACCCCCTTTTTTTCCTGC-ATGTACC  880


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