BAC Information

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BAC

Clone NameB6Ng01-347I20
Chromosome14 (Build37)
Map Location 80,401,288 - 80,401,923
singlet/doubletsinglet
Overlap geneOlfm4
Upstream gene1300010F03Rik, LOC100043765, AU017455, 1190002H23Rik, Narg1l, Mtrf1, Kbtbd7, EG432879, Wbp4, Elf1, LOC668560, Sugt1, Lect1, Pcdh8, EG629734
Downstream geneLOC672828
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-347I20.bB6Ng01-347I20.g
ACCGA129121GA129122
length1,211636
definitionB6Ng01-347I20.b B6Ng01-347I20.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagagatctgtctgccttttttaagcacagataataaacagggtg
ggactgcaccctgaaatgaccatttctaccacacctaggcctggacctaa
atttcctctatgccaggctgaccttgaactcaggaatctgtttgcctttg
taagcataaacaaaacaaacaaacaaagctgggtgggatggcctgcaatt
atccctccctaaatctcttcatctccttcctctgtatctgtatgacaagt
tggctcacaacacagctgcttttgttcctttagattcacaaagcccctca
tataattcttatattgcatccttatattttacacagttgaaaaaatatat
atttttgaatttatgtctttagagttcttttccacagccttaaggcctgt
cctgaagatcccaacatttgccattttgctgagccacatctttgcctccc
agatttgtgctgtctttgattatcattaatgttaacagggaggacatttc
tcgaaggaggaacatggaaatatgtacattattatacaaacaagccttac
acttacggcagccataaacactcctggaggtccacccctgttggctctgt
cccaggggcaggaaccaggtcattccttacctaccaaagccaggcaacct
tagcccacaccttttttttttttttcaggattttttttttaatacgtatt
ttcctcaatgacatttccaatgctatcccaaaagtcccccataccctccc
ccccacttccctaccgacccattctcatttttttggccctggcgttcccc
tgtactggggcatataaagtttgtgtgtccaatgggccctctctttccag
tgatggccgactaggccatcttttgatacatatgtagctagagtcaagag
cttcggagtactggttagttcataatgttgttgcacctacagggttgcag
atctctttagctctttggtactttctctagcttcttcattgggggcccta
tgatcatcaatagctgactgtgatcatcaactatgtgttgctagccctgc
tagtctcacaagagacagctatatctgggtctttcagcaaatctggctag
tgtatgcagtgtgtccagcgttgtagctgattatggggtgatcctagaat
aagcatctaatgtcaacttttggcgagcttcgaactgtcctgtgaactcc
tctccatgatg
gaattcttttcaatttttttttaatatggaatttctgggactgtttccag
tgccaaacaactacagcagtaaaatgaacgaatgaagggtccatgtttca
tagggatcagcctagagaggctcccgatgtacaacacttggtttgcctaa
ttctttgggggtgagaactcattgaatttcctttaaaaaaataaagagag
gcatgaaagagctacaggatgcgggacaggaaacagttgtccactttacc
tctggacacacacacacacacacacatatatgtatatgtatatatatata
tacactattttttaattggttattttatttatttacatttcaaatgttat
ctcccttctcggtttccccttcacaaaccccctatcccatcccccttccc
ctgcttctatgagggtgctccctcatccacctgcccactcctgcctcccc
acccttacatttccctatgctggggcatcaagctttcacaggaccaaggg
cttcccctcccattgatcgcagataaggctatcctctgctacacacgcag
ctggagccatgggtccctctatgtgtacttttggttggtgatttagtcct
tgggagctctggcggggggggggggtctggttggtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_80401288_80401923
seq2: B6Ng01-347I20.g_68_703

seq1  GAATTCTTTTCAATTTTTTTTTAATATGGAATTTCTGGGACTGTTTCCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTCAATTTTTTTTTAATATGGAATTTCTGGGACTGTTTCCAG  50

seq1  TGCCAAACAACTACAGCAGTAAAATGAACGAATGAAGGGTCCATGTTTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAAACAACTACAGCAGTAAAATGAACGAATGAAGGGTCCATGTTTCA  100

seq1  TAGGGATCAGCCTAGAGAGGCTCCCGATGTACAACACTTGGTTTGCCTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGATCAGCCTAGAGAGGCTCCCGATGTACAACACTTGGTTTGCCTAA  150

seq1  TTCTTTGGGGGTGAGAACTCATTGAATTTCCTTTAAAAAAATAAAGAGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTGGGGGTGAGAACTCATTGAATTTCCTTTAAAAAAATAAAGAGAG  200

seq1  GCATGAAAGAGCTACAGGATGCGGGACAGGAAACAGTTGTCCACTTTACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGAAAGAGCTACAGGATGCGGGACAGGAAACAGTTGTCCACTTTACC  250

seq1  TCTGGACACACACACACACACACACATATATGTATATGTATATATATATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGACACACACACACACACACACATATATGTATATGTATATATATATA  300

seq1  TACACTATTTTTTAATTGGTTATTTTATTTATTTACATTTCAAATGTTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACTATTTTTTAATTGGTTATTTTATTTATTTACATTTCAAATGTTAT  350

seq1  CTCCCTTCTCGGTTTCCCCTTCACAAACCCCCTATCCCATCCCCCTTCCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTTCTCGGTTTCCCCTTCACAAACCCCCTATCCCATCCCCCTTCCC  400

seq1  CTGCTTCTATGAGGGTGCTCCCTCATCCACCTGCCCACTCCTGCCTCCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTCTATGAGGGTGCTCCCTCATCCACCTGCCCACTCCTGCCTCCCC  450

seq1  ACCCTTACATTTCCCTATGCTGGGGCATCAAGCTTTCACAGGACCAAGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTTACATTTCCCTATGCTGGGGCATCAAGCTTTCACAGGACCAAGGG  500

seq1  CTTCCCCTCCCATTGATCGCAGATAAGGCTATCCTCTGCTACACACGCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCCCTCCCATTGATCGCAGATAAGGCTATCCTCTGCTACACACGCAG  550

seq1  CTGGAGCCATGGGTCCCTCTATGTGTACTTTTGGTTGGTGATTTAGTCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAGCCATGGGTCCCTCTATGTGTACTTTTGGTTGGTGATTTAGTCCT  600

seq1  TGGGAGCTCTGGCGGGGGGGGGGGGTCTGGTTGGTT  636
      ||||||||||||||||||||||||||||||||||||
seq2  TGGGAGCTCTGGCGGGGGGGGGGGGTCTGGTTGGTT  636