BAC Information

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BAC

Clone NameB6Ng01-347O06
Chromosome14 (Build37)
Map Location 100,284,398 - 100,285,531
singlet/doubletsinglet
Overlap geneKlf12
Upstream geneLOC100043787, 2410129H14Rik, 6720463M24Rik, Dis3, D14Ertd581e, LOC100043395, LOC100043397, Klf5, LOC100043400, LOC100043789, LOC668671, LOC668672, EG546623
Downstream geneLOC100043413, EG668683, EG668684
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-347O06.bB6Ng01-347O06.g
ACCGA129355GA129356
length1,1981,130
definitionB6Ng01-347O06.b B6Ng01-347O06.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctgtttaactctgagccccattttttaattatttgattttctg
gagtccaccttcttgagttgtttatatatattggacattagttcccctat
ctgatttaagataggtaaagttactttcccaatttgttggtggcattttt
gtcttattgacagtgtcttttgccttgcagaagctttgcagttttatgag
gtcccatttgtcgattctcgatcttatagcacaagccattgccgttcctt
tcaggaatttattccctgtacccatatcttcgaggcttttccctactgtc
tcctctataagtttcagtgtctctagttttatgtggagttccttaatcca
cttagatttgaccttagtacaaagagataggtatggatcaatttgcattc
ttctacatgataaccaccagttgtgccagcaccatttgttgaaaatgctg
tcttttttctactggatgtttttagctcccttgtcagagatcaagtaacc
ataggtgtgtgggttcatttctgggtcttcaattctattttattggtgta
cttgtctgtcgctttaccagtaccatgcagtttttaccacaattgctcca
tagtacagctttaggtcaggcatggtgattccaccagaggttcttttatc
tttgaaaaaaggatttttgttattccagatgaatttgcagattgcccttt
ctaatttgttgaagaattgagttggaattttgatggggattgcactgaat
cggtagattgcttttggcaagatagccatttttactatattgatcctgcc
aatccatgagcatgggagatctttccatcttctgagatcttctttaattt
ctttcttcagagacttgaagttcttatcatacagatctttcacttccttt
agttagagacacgccaaggtattttatattatttgtgactattgagaagg
gtgttgtttccctaatttttcatggcctgtttatcctttgtgtagagaaa
gcattggcttgtttgagtaattttatatccagctacttcattgaagctga
tattcagctagagttctctggtgatttaaggttcacttattatactatca
tatcatctgcaaaggaattttgactccttcttttccaattgatccttgat
tctttggtggcgaatgcctgctaggaacttcaagaccaagtagtttag
gaattccgtggacagccagtccatcccagtcagcaagatgagggttaagg
gaaaaaatacgcctccaaaatcaaagtggagaagcaattagtggagacat
tctgtgtcagcctctggggtctacataggcttgtgtgggtgaacacatct
aaatacatttaaaaaaaaacataacgctcgctcactctctctcgctctct
ctcgctctctctctctctctctctctctctctctctcacacacacacaca
cacacacacacacacaacttcacatcgcacacaacagcagagatgtattt
tatttacatttccttacagtaaacaggattaccttgagtctcataaccat
aaaatcaaatattctgtaatgtgcagtttggagtctcacagactgtggga
ataaatgaccagccaaagacgttgaattctacagcctagaactcagatgc
aggttggtaactgaccccgtgtttggccatttggcctgattgtaaaaccc
caggtagcatgggctgtattaaccccaagagggagtatgagctagcccag
ccttgggcaatgcagtggcttgtaataccaactctgtcctgatctccagg
tttctagttccttgtcttgaaagcacctagtttccttccaggtctagata
tctgtgaaccttcatgaactgatgtaacagaaaccagaagacaagatagg
aatcttgactccccctctccttctctttcctcatatgcaaataccattcc
tccggtgaaacaggttgtcacagcaaatatgttgagccctgaatgaaatg
aagctcatttgtcagtgtctgggccctgtaacttttgtaaaagttaaaca
tatttcagaaatgcacttctgaacctagaaaatgcctgtacttcctgttg
ctaaagggttccttttcagttgcttgagaaataacagaggagccacggag
agcacggggttttgtttaacatgggcctttgaaatgcacattctctctct
atgtgtatagctcacacgtcatctccgtatgaaagggcacctgctctttt
gttttcattccacatttacttttagcatttcaggtgggtgaaatgggagg
ccctgaaagtgatttttttgtttgtaggtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_100284398_100285531
seq2: B6Ng01-347O06.g_67_1196 (reverse)

seq1  AACCTACCAAACAAAAAAATCACTTTTTCAGGGCCTCCCATTTCA-CCAC  49
      |||||| ||||||||||||||||  |||||||||||||||||||| ||||
seq2  AACCTA-CAAACAAAAAAATCAC--TTTCAGGGCCTCCCATTTCACCCAC  47

seq1  CTGAAATGCTAAAAGGTAAATGTGGATTGAGA--CAAAGGGCAGGTGCCC  97
      |||||||||||||| ||||||||||| ||| |   |||| ||||||||||
seq2  CTGAAATGCTAAAA-GTAAATGTGGAATGAAAACAAAAGAGCAGGTGCCC  96

seq1  TTTCATACGGAGATGACGTGTGAGCTATACACATAGAGAGAGGAATGTGC  147
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TTTCATACGGAGATGACGTGTGAGCTATACACATAGAGAGA-GAATGTGC  145

seq1  AATTTCAAAAGGCCCATGTTAAACAAAACCCCGTGCTCTCCGTGGCTCCT  197
       ||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  -ATTTC-AAAGGCCCATGTTAAACAAAACCCCGTGCTCTCCGTGGCTCCT  193

seq1  CTGTTATTTTCTCAAGCAACTGAAAAGGAACCCTTTAGCAACAGGAAGTA  247
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTA-TTTCTCAAGCAACTGAAAAGGAACCCTTTAGCAACAGGAAGTA  242

seq1  CAGGCATTTTCTAGGTTCAGAAGTGCATTTCTGAAATATGTTTAACTTTT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCATTTTCTAGGTTCAGAAGTGCATTTCTGAAATATGTTTAACTTTT  292

seq1  AC-AAAGTTACAGGGCCCAGACACTGACAAATGAGCTTCATTTCATTCAG  346
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAGTTACAGGGCCCAGACACTGACAAATGAGCTTCATTTCATTCAG  342

seq1  GGCTCAACATATTTGCTGTGACAACCTGTTTCACCGGAGGAATGGTATTT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCAACATATTTGCTGTGACAACCTGTTTCACCGGAGGAATGGTATTT  392

seq1  GCATATGAGGAAAGAGAAGGAGAGGGGGAGTCAAGATTCCTATCTTGTCT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATATGAGGAAAGAGAAGGAGAGGGGGAGTCAAGATTCCTATCTTGTCT  442

seq1  TCTGGTTTCTGTTACATCAGTTCATGAAGGTTCACAGATATCTAGACCTG  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGTTTCTGTTACATCAGTTCATGAAGGTTCACAGATATCTAGACCTG  492

seq1  GAAGGAAACTAGGTGCTTTCAAGACAAGGAACTAGAAACCTGGAGATCAG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGAAACTAGGTGCTTTCAAGACAAGGAACTAGAAACCTGGAGATCAG  542

seq1  GACAGAGTTGGTATTACAAGCCACTGCATTGCCCAAGGCTGGGCTAGCTC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGAGTTGGTATTACAAGCCACTGCATTGCCCAAGGCTGGGCTAGCTC  592

seq1  ATACTCCCTCTTGGGGTTAATACAGCCCATGCTACCTGGGGTTTTACAAT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTCCCTCTTGGGGTTAATACAGCCCATGCTACCTGGGGTTTTACAAT  642

seq1  CAGGCCAAATGGCCAAACACGGGGTCAGTTACCAACCTGCATCTGAGTTC  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCCAAATGGCCAAACACGGGGTCAGTTACCAACCTGCATCTGAGTTC  692

seq1  TAGGCTGTAGAATTCAACGTCTTTGGCTGGTCATTTATTCCCACAGTCTG  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCTGTAGAATTCAACGTCTTTGGCTGGTCATTTATTCCCACAGTCTG  742

seq1  TGAGACTCCAAACTGCACATTACAGAATATTTGATTTTATGGTTATGAGA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGACTCCAAACTGCACATTACAGAATATTTGATTTTATGGTTATGAGA  792

seq1  CTCAAGGTAATCCTGTTTACTGTAAGGAAATGTAAATAAAATACATCTCT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAGGTAATCCTGTTTACTGTAAGGAAATGTAAATAAAATACATCTCT  842

seq1  GCTGTTGTGTGCGATGTGAAGTTGTGTGTGTGTGTGTGTGTGTGTGTGTG  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTTGTGTGCGATGTGAAGTTGTGTGTGTGTGTGTGTGTGTGTGTGTG  892

seq1  TGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGCGAGAGAGAGCGAGAG  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGCGAGAGAGAGCGAGAG  942

seq1  AGAGTGAGCGAGCGTTATGTTTTTTTTTAAATGTATTTAGATGTGTTCAC  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTGAGCGAGCGTTATGTTTTTTTTTAAATGTATTTAGATGTGTTCAC  992

seq1  CCACACAAGCCTATGTAGACCCCAGAGGCTGACACAGAATGTCTCCACTA  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACACAAGCCTATGTAGACCCCAGAGGCTGACACAGAATGTCTCCACTA  1042

seq1  ATTGCTTCTCCACTTTGATTTTGGAGGCGTATTTTTTCCCTTAACCCTCA  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTTCTCCACTTTGATTTTGGAGGCGTATTTTTTCCCTTAACCCTCA  1092

seq1  TCTTGCTGACTGGGATGGACTGGCTGTCCACGGAATTC  1134
      ||||||||||||||||||||||||||||||||||||||
seq2  TCTTGCTGACTGGGATGGACTGGCTGTCCACGGAATTC  1130