BAC Information

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BAC

Clone NameB6Ng01-348C20
Chromosome14 (Build37)
Map Location 19,128,718 - 19,129,899
singlet/doubletsinglet
Overlap geneUbe2e1
Upstream geneThrb, LOC627608, Nr1d2, LOC632287, Rpl15, Nkiras1
Downstream geneLOC627717, LOC238963, Ube2e2, LOC627741, LOC100042299, LOC675069, LOC100042322, LOC632470, EG632477, EG632498, EG667341, LOC667344, LOC619996
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-348C20.bB6Ng01-348C20.g
ACCGA129550GA129551
length1,189907
definitionB6Ng01-348C20.b B6Ng01-348C20.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaagttaagaaaatacattcgtgaaaattgtctatttttctaaa
aatattaggatactattctgactttgttttaaattagtaattaattgagc
atcaattaacaatttggctcatttggggtttgggcatctgaacaaagaag
aggcactctcttttggtagatggtctcctctctggcttttagatccctgc
tattgctgttgttaagagttgattccaagagttgttgctgctgctgctgt
tttaagctgatttggagtaagcttgcctttgatttgcctttttgtagcat
ttgagttgtagcatttgagtcagctccctaacagtggactaggaagaaac
aaagaaatagcatgtgaactgagaggtagaattcttgatgtaaatgtagg
gaggaatttttacttttccttgtttttaaaatggctgtttttgtcttctg
tttaatgtgactactgagccacaagagactttggaaccattttaaccatg
gtcaggttttagggaccactgggcagaggtgcttgcagccattcttagtg
actaggacccacatagtggcaggagagagccaacatctacaagttattct
ttgatttccacatatacagagagaattaaatgtaatatttaaaagcattt
aaaatgaaaatgagagcagttataaacatgcttgtcatactgcatctttg
ctggggaaaaaatcagaaacggagtccataatagttccttgtcttagtca
gggtttctattcctgcacaaacatcatgaccaagaagcaagttggggagg
aaaaggtttattcagcttatgattccatactgctgtttatcaccaaggaa
gtcaggactagaactcaaacaggtcagaagcagagctgatgcagaggcca
tggagggatgttctttactggcttgcttcccctggcttgctcagcctgct
ctccttatagaaccaagactaccagctcaaagatggtccccactccacag
gggccctttctcctttgatccactaattgaaaaaaatgccttacagttgt
atcctcatgaggcattcctccaactgaagcctttcctctggtgatacctc
cagctgtgtcaagttaccacaaacctagccaaaccagtgaccctgtcaac
ttgcaccaccaaccacatcacctattaagcccctcaacc
gaattctgtgctaaaactatctagcccaaggctttttggggtggtggtgg
tggtggtgttgtgagacatctaatgactgcttctgtttcactagggatta
caggtctatttaaaatctttgtctgaccttgatttaatttttgaaagtgg
tatctaacaagaaaatgttccatttcatttagactttccaattttgtgaa
gtacaaaattttaaagtacgctcttagaattctctcaatttcctcattgt
ctgttgctatgcccccctttttcttttctgattctgttaattggatattc
tctccccctcttttagcttagataggggtttatctatcttgttgattttc
tcaacgaattagttgtttcactgattctttgtgtagttctgtttctattt
atttcagccctcagtttatttcttgtggtctactcctcttgtgtgcactt
ctttttgttgcacagcttttaagctgtgctactaagtagctagtatgaga
tctcttatttttttatgtaggcacttagtgctatgaacttgatgcttagc
accaatttcattgtgccctataagttttggtatgctgtttgctcattttt
cactaaaattctatttctgaattctaattcgttatttttgtcttgcccca
ttttttcacttcaggaagaagttattcagtttccatgagtttgtaagcct
tttgttttttgttgctgattgatatcccagctttaatctgtggttgtcct
gatagatcccaaggatattatttccaatttggagacttgctttgtgttcc
tagtatggttgccaatttaggaaaaagtttcatggaaggtgctgagaagg
ttatatttcattttttgtccctgggtggaaatgtttatgtaaaatatgtt
taaattc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_19128718_19129899
seq2: B6Ng01-348C20.b_47_1235 (reverse)

seq1  GGTTGA--GGCTTAATA-GTGATGT-GTTTGTGTGTCAAGTTGACAAGGG  46
      ||||||  ||||||||| ||||||| ||| |||   ||||||||||  ||
seq2  GGTTGAGGGGCTTAATAGGTGATGTGGTTGGTGGTGCAAGTTGACA--GG  48

seq1  GTCAACTGTTTGGCTAGTTTTGTGTAAACTTGACACAGCTGGAGTTATCA  96
      ||||   |||||||||| ||||||  |||||||||||||||||| |||||
seq2  GTCACTGGTTTGGCTAGGTTTGTGGTAACTTGACACAGCTGGAGGTATCA  98

seq1  -CAGAG--AAAGCTTCAGTTGAGGAAATGCCTCCATGA-GATACAACTGT  142
       |||||  || ||||||||||  | ||||||| ||||| |||||||||||
seq2  CCAGAGGAAAGGCTTCAGTTGGAGGAATGCCT-CATGAGGATACAACTGT  147

seq1  AAGGCATTTTTTTCAATTAGT-GATCAAAGGGGAAAGGCCCCTTGTGG-G  190
      ||||||||||||||||||||| ||||||||| |||||| ||| ||||| |
seq2  AAGGCATTTTTTTCAATTAGTGGATCAAAGGAGAAAGGGCCCCTGTGGAG  197

seq1  T-GGGACCATCTTTGGGCTGGTAGTCTTGGTTCTATAA-GAGAGCAGGCT  238
      | ||||||||||||| |||||||||||||||||||||| |||||||||||
seq2  TGGGGACCATCTTTGAGCTGGTAGTCTTGGTTCTATAAGGAGAGCAGGCT  247

seq1  GAGCAAGCCAGGGGAAGCAAGCCAGTAAAGAACATCCCTCCATGGCCTCT  288
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAAGCCAGGGGAAGCAAGCCAGTAAAGAACATCCCTCCATGGCCTCT  297

seq1  GCATCAGCTCCTGCTTCCTGACCTGTTTGAGTTCTAGTCCTGACTTCCTT  338
      ||||||||| |||||| |||||||||||||||||||||||||||||||||
seq2  GCATCAGCT-CTGCTT-CTGACCTGTTTGAGTTCTAGTCCTGACTTCCTT  345

seq1  GGTGATAAACAGCAGTATGGAATCATAAGCTGAATAAACCTTTTCCTCCC  388
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGATAAACAGCAGTATGGAATCATAAGCTGAATAAACCTTTTCCTCCC  395

seq1  CAACTTGCTTCTTGGTCATGATGTTTGTGCAGGAATAGAAACCCTGACTA  438
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTTGCTTCTTGGTCATGATGTTTGTGCAGGAATAGAAACCCTGACTA  445

seq1  AGACAAGGAACTATTATGGACTCCGTTTCTGATTTTTTCCCCAGCAAAGA  488
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAAGGAACTATTATGGACTCCGTTTCTGATTTTTTCCCCAGCAAAGA  495

seq1  TGCAGTATGACAAGCATGTTTATAACTGCTCTCATTTTCATTTTAAATGC  538
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGTATGACAAGCATGTTTATAACTGCTCTCATTTTCATTTTAAATGC  545

seq1  TTTTAAATATTACATTTAATTCTCTCTGTATATGTGGAAATCAAAGAATA  588
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAATATTACATTTAATTCTCTCTGTATATGTGGAAATCAAAGAATA  595

seq1  ACTTGTAGATGTTGGCTCTCTCCTGCCACTATGTGGGTCCTAGTCACTAA  638
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGTAGATGTTGGCTCTCTCCTGCCACTATGTGGGTCCTAGTCACTAA  645

seq1  GAATGGCTGCAAGCACCTCTGCCCAGTGGTCCCTAAAACCTGACCATGGT  688
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGGCTGCAAGCACCTCTGCCCAGTGGTCCCTAAAACCTGACCATGGT  695

seq1  TAAAATGGTTCCAAAGTCTCTTGTGGCTCAGTAGTCACATTAAACAGAAG  738
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATGGTTCCAAAGTCTCTTGTGGCTCAGTAGTCACATTAAACAGAAG  745

seq1  ACAAAAACAGCCATTTTAAAAACAAGGAAAAGTAAAAATTCCTCCCTACA  788
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAACAGCCATTTTAAAAACAAGGAAAAGTAAAAATTCCTCCCTACA  795

seq1  TTTACATCAAGAATTCTACCTCTCAGTTCACATGCTATTTCTTTGTTTCT  838
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACATCAAGAATTCTACCTCTCAGTTCACATGCTATTTCTTTGTTTCT  845

seq1  TCCTAGTCCACTGTTAGGGAGCTGACTCAAATGCTACAACTCAAATGCTA  888
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAGTCCACTGTTAGGGAGCTGACTCAAATGCTACAACTCAAATGCTA  895

seq1  CAAAAAGGCAAATCAAAGGCAAGCTTACTCCAAATCAGCTTAAAACAGCA  938
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAGGCAAATCAAAGGCAAGCTTACTCCAAATCAGCTTAAAACAGCA  945

seq1  GCAGCAGCAACAACTCTTGGAATCAACTCTTAACAACAGCAATAGCAGGG  988
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCAGCAACAACTCTTGGAATCAACTCTTAACAACAGCAATAGCAGGG  995

seq1  ATCTAAAAGCCAGAGAGGAGACCATCTACCAAAAGAGAGTGCCTCTTCTT  1038
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAAAAGCCAGAGAGGAGACCATCTACCAAAAGAGAGTGCCTCTTCTT  1045

seq1  TGTTCAGATGCCCAAACCCCAAATGAGCCAAATTGTTAATTGATGCTCAA  1088
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCAGATGCCCAAACCCCAAATGAGCCAAATTGTTAATTGATGCTCAA  1095

seq1  TTAATTACTAATTTAAAACAAAGTCAGAATAGTATCCTAATATTTTTAGA  1138
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTACTAATTTAAAACAAAGTCAGAATAGTATCCTAATATTTTTAGA  1145

seq1  AAAATAGACAATTTTCACGAATGTATTTTCTTAACTTTGAATTC  1182
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAGACAATTTTCACGAATGTATTTTCTTAACTTTGAATTC  1189