BAC Information

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BAC

Clone NameB6Ng01-348J07
Chromosome14 (Build37)
Map Location 8,346,264 - 8,347,344
singlet/doubletsinglet
Overlap geneLOC100042286
Upstream geneLOC546590, LOC666906, LOC100042024, LOC100041664, LOC100042077, LOC100041675, LOC666329, EG666833, LOC100042043, EG666918, LOC100041700, LOC100042054, LOC100042100, EG622781, LOC100041740, LOC100038847, LOC100042129, LOC100041770, LOC100042149, LOC544988, EG626456, LOC100041791, LOC100042164, LOC100042182, LOC100041808, LOC100042192, LOC100042207, EG432817, LOC100042217, LOC100041830, LOC100042235, EG545013, EG666947, LOC623215, LOC666957, LOC100042263, LOC100042258, LOC100042272
Downstream geneLOC100041874, LOC100042304, LOC100041881, LOC100042312, LOC100041893, ENSMUSG00000058570, EG666976, Flnb, Dnase1l3, Abhd6, Rpp14, Pxk, Pdhb, Kctd6, Acox2, BC055107, Oit1, LOC667005, 4930452B06Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-348J07.bB6Ng01-348J07.g
ACCGA129834GA129835
length1,0811,119
definitionB6Ng01-348J07.b B6Ng01-348J07.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaccattggaaaatcactaacagcactgtgaagttttctaaggtg
gacagcaggaagcatgtccttttcctaccctctccctcagcccctcttcc
cccacctgtgtaggattttgaggtcgaatgtgcagtgtgcactgctgctg
caaggtagctcttccctgtggctgtgctgaagcagctggccagggaagcc
tgggagctgaggctccagcctgtggattctctttcctcagactttagtct
gcaccagggagtggtgttctctcctgtggatgtgtgtatatatattcttt
gctttatactttgttcacgtagttcggtgcattcttccaggcattctgga
tgggcgctttagcctagacatttatttcagcatattgtcatcttgtgctg
cgtgtcctctcttgtttctgtgtcctcaccatgcccttcccagcttcctg
ttagccaaagggaatcactctttctgaaacaaaagctctcagagcagagc
tgaacctcccagaaaatgctcttctctacctaatgcgccagatgggggtg
ggcccgaagctaaacagcactgtagaggtggcctaaaggccccaaaccta
gcaatggtgctgagtaagggtccatgagaccgagttcttctccagggcag
aggaaacttttacttagctggagttgtactttgtggtccgagtatgtgga
gggattcggggtccagagtgcaccccagaacataggagatatctccatgt
ccccctttccctcaggagccttctcctcactcctgctgcctagaacaagg
ggaggaggatctccactgcctgacctgctgcttcatgccccttcctatct
ctactctatttcctctgagccctccagaccctaggaggagtgagagggag
gtccttcgaggctatctcgacatcttgtcatcttcattctggtgctggtc
atatcctgggtcagcacaccagaacatcccaaggcttgggttgcccaggc
gttgaagtgcacagaggactctagaggtctagacaggggagcttgtgatc
aggtccgggtccagtgtgctgcgcggtaggg
gaattctttgtttacctctgtaccccatttttaatggggttatttgattt
tctggactctaacttcttgagttctttatgtttatattggatattagttc
cctatcagatttaggcttgggaaagatcctttcccaatctgttggtggac
tttttgtcttattaaatgtgtcttttgccttacagaagctttgcaattat
atgaggtcccagttgtagattcttgatcttacagcacaagccattattgt
tctgttcagaaagttttcacctgtgcccatatttttcaggcttttctaga
ctttcttctctataagttttagtgttcatatcttcaagtctcttccctac
tgttcctgtaccatgcagtttttaatcacaattgctctgtagtactgctt
gaagtgacacatggtgattcacctaaaagttctttaattgttcagaatag
tttttgcgatcctagattttttgttattccagatgaatttgaaaattgac
atttctaactctatgaagaattgagttggaattttgatggggattgcatt
taatctgtagattggttttggcaagatggctattttgactatattaatca
tgccaatccatgagatttttccatcttttgagatcttcgatttctttctt
cagagacctgaagttcttatacagatcttttacttccttagttagagtca
ccccaaggtattttatattatttatgactactgtgaagggtgttgtttcc
ctaatttctttctcagcctgtttattcttgtgtagagaaaggccactgat
ttgtttgagttaattttatatacatctacttcactgaagctattatcggg
tttaggagttctctggtggaattttttttaaattttttattaggtattta
gctcattacattccatgctatatcaaagtccccataccaccacctcactc
ctacccatcactcccctttgtcctggcgtccctgactgggcatataattt
gcagtccatggtctcctttcaggaatgccgactaggccatcctttgatac
atagcagctcagtcagagctcaggtaactgtgagctaaatgtgtgcaagc
atagagggtagtgctcgaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_8346264_8347344
seq2: B6Ng01-348J07.b_50_1130

seq1  GAATTCACCATTGGAAAATCACTAACAGCACTGTGAAGTTTTCTAAGGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCATTGGAAAATCACTAACAGCACTGTGAAGTTTTCTAAGGTG  50

seq1  GACAGCAGGAAGCATGTCCTTTTCCTACCCTCTCCCTCAGCCCCTCTTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGCAGGAAGCATGTCCTTTTCCTACCCTCTCCCTCAGCCCCTCTTCC  100

seq1  CCCACCTGTGTAGGATTTTGAGGTCGAATGTGCAGTGTGCACTGCTGCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACCTGTGTAGGATTTTGAGGTCGAATGTGCAGTGTGCACTGCTGCTG  150

seq1  CAAGGTAGCTCTTCCCTGTGGCTGTGCTGAAGCAGCTGGCCAGGGAAGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGTAGCTCTTCCCTGTGGCTGTGCTGAAGCAGCTGGCCAGGGAAGCC  200

seq1  TGGGAGCTGAGGCTCCAGCCTGTGGATTCTCTTTCCTCAGACTTTAGTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAGCTGAGGCTCCAGCCTGTGGATTCTCTTTCCTCAGACTTTAGTCT  250

seq1  GCACCAGGGAGTGGTGTTCTCTCCTGTGGATGTGTGTATATATATTCTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCAGGGAGTGGTGTTCTCTCCTGTGGATGTGTGTATATATATTCTTT  300

seq1  GCTTTATACTTTGTTCACGTAGTTCGGTGCATTCTTCCAGGCATTCTGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTATACTTTGTTCACGTAGTTCGGTGCATTCTTCCAGGCATTCTGGA  350

seq1  TGGGCGCTTTAGCCTAGACATTTATTTCAGCATATTGTCATCTTGTGCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCGCTTTAGCCTAGACATTTATTTCAGCATATTGTCATCTTGTGCTG  400

seq1  CGTGTCCTCTCTTGTTTCTGTGTCCTCACCATGCCCTTCCCAGCTTCCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGTCCTCTCTTGTTTCTGTGTCCTCACCATGCCCTTCCCAGCTTCCTG  450

seq1  TTAGCCAAAGGGAATCACTCTTTCTGAAACAAAAGCTCTCAGAGCAGAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCCAAAGGGAATCACTCTTTCTGAAACAAAAGCTCTCAGAGCAGAGC  500

seq1  TGAACCTCCCAGAAAATGCTCTTCTCTACCTAATGCGCCAGATGGGGGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACCTCCCAGAAAATGCTCTTCTCTACCTAATGCGCCAGATGGGGGTG  550

seq1  GGCCCGAAGCTAAACAGCACTGTAGAGGTGGCCTAAAGGCCCCAAACCTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCGAAGCTAAACAGCACTGTAGAGGTGGCCTAAAGGCCCCAAACCTA  600

seq1  GCAATGGTGCTGAGTAAGGGTCCATGAGACCGAGTTCTTCTCCAGGGCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATGGTGCTGAGTAAGGGTCCATGAGACCGAGTTCTTCTCCAGGGCAG  650

seq1  AGGAAACTTTTACTTAGCTGGAGTTGTACTTTGTGGTCCGAGTATGTGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAACTTTTACTTAGCTGGAGTTGTACTTTGTGGTCCGAGTATGTGGA  700

seq1  GGGATTCGGGGTCCAGAGTGCACCCCAGAACATAGGAGATATCTCCATGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATTCGGGGTCCAGAGTGCACCCCAGAACATAGGAGATATCTCCATGT  750

seq1  CCCCCTTTCCCTCAGGAGCCTTCTCCTCACTCCTGCTGCCTAGAACAAGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCTTTCCCTCAGGAGCCTTCTCCTCACTCCTGCTGCCTAGAACAAGG  800

seq1  GGAGGAGGATCTCCACTGCCTGACCTGCTGCTTCATGCCCCTTCCTATCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGAGGATCTCCACTGCCTGACCTGCTGCTTCATGCCCCTTCCTATCT  850

seq1  CTACTCTATTTCCTCTGAGCCCTCCAGACCCTAGGAGGAGTGAGAGGGAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTCTATTTCCTCTGAGCCCTCCAGACCCTAGGAGGAGTGAGAGGGAG  900

seq1  GTCCTTCGAGGCTTATCTCGACATC-TGTCATC-TCATTCTGGTGCTGGT  948
      |||||||||||| |||||||||||| ||||||| ||||||||||||||||
seq2  GTCCTTCGAGGC-TATCTCGACATCTTGTCATCTTCATTCTGGTGCTGGT  949

seq1  CATATCCTGGGTCAGCAACACCAGAACATCCCAAGGCT--GGGTGCCCAG  996
      |||||||||||||||| |||||||||||||||||||||  || |||||||
seq2  CATATCCTGGGTCAGC-ACACCAGAACATCCCAAGGCTTGGGTTGCCCAG  998

seq1  GCG-TGAAGTGCACAGAGGACCCAAGAGGTCTAGACAGGGGAGGCTTGTG  1045
      ||| ||||||||||||||||| | |||||||||||||||||| |||||||
seq2  GCGTTGAAGTGCACAGAGGACTCTAGAGGTCTAGACAGGGGA-GCTTGTG  1047

seq1  ATCCAGGGTCCCGGGTCCAGGGTGCTGCGCGG-AGGG  1081
      || ||||   |||||||||| ||||||||||| ||||
seq2  AT-CAGG--TCCGGGTCCAGTGTGCTGCGCGGTAGGG  1081