BAC Information

Click to search

BAC

Clone NameB6Ng01-348O24
Chromosome14 (Build37)
Map Location 63,221,329 - 63,318,924
singlet/doubletdoublet
Overlap geneEG629059, E130113E03Rik, Ints6
Upstream geneTrim13, Kcnrg, LOC668253, Dleu7, Rnaseh2b, Gucy1b2, LOC100042960, Ppia-ps14_723.1, LOC545062
Downstream geneLOC100042969, LOC668263, Wdfy2, LOC668268, EG432867, EG654465, EG654458, 2410125J01Rik, Defb42, LOC100042978, Ctsb, Fdft1, Neil2, Gata4, LOC100042988, LOC432868, Blk, LOC668293, BC065085, Tdh, Mtmr9
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-348O24.bB6Ng01-348O24.g
ACCGA130075GA130076
length1,1841,147
definitionB6Ng01-348O24.b B6Ng01-348O24.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(63,317,734 - 63,318,924)(63,221,329 - 63,222,463)
sequence
gaattctattatggcattggtattgggcatatttggtaagaagagagtgg
aaagacagtcaaagttcaattcaggggtggccttcgacccttttataaaa
gattttgtattttattccaagatcagtgagaaaccattgaatgcttcaaa
agaggtggcaacttggttagcattttatgtatggggtatcattttatata
tgggaatataggaaacttaataagtcaatgtttttgttaattttacatag
tgacctcatttgcttatataacatcttaaacatacggatgttaaacatat
ggagagaaatccaatgttatgtactatgtgatagaattatacagtactct
tctcttaaatatatttgactcttctcccctgttctgtattgaatatcagt
gtgatcaagcctctagatctagtaattgcatgggaaataaaagagacaga
aaaagaggttaaataacaaaagtggggtacaatcagaaaattaagatcat
agggaactctaggacatacacccaaaaacgaatctgttgtgttgtttttg
ttattgaaaaatataatgaaaagagagatgcagaaaggctttatagagtc
aaagggccagttacgatgcatggacctcacttggatccagaataaaataa
gattaaaccttcaaaaacaaaatgtataaaataactgaagggtgagaatg
ctgactgggtagttgatgttatactgtaactgttgtacatccatagggcc
taattagtaaatgcagatgatttgacctgactgtgccttgagaaacagtc
ggcaagttaggaaaagcagtaagtgtgagtttatcttaatagtgtgttga
tggtttgaaaagctttagaaacagaccatgcaagttagaaacatcttttg
gtctttgtctgtcttactatcaccaatacatttttgtgaagtaaggacag
aaagctttttttaaaaaaaaattgagaaagaaagaaggatgaaagtacac
ttgtatgaaaatccagttttgagttaagctgtaagggcaggagggctagt
gagtatcagtcaatcaagatgagaatggtgatttgctcgagaatgtttaa
atgcttgcatcattgacttagtataacagaaaggtcaatcagatgagaag
caattatctccactagaaaggcaaggaggaaatg
gaattccagtggagcatccagcccatgctgctccagagggaagggaggga
ggctggcttcacaccatctctgttatcactgctggggctcaggaaggctg
cccctgagaagtggcagccaaccctgagtcacaagctcctgttatactcc
tgtaaatcccactagggcctgtctggattcgctctcagcccctattgttc
ccagtcaagcagagaggcaggaaacaaaaagccagccccagggaaacaca
tcagaggctccatccttggaacagtgggctgtctttaggtctgatgagat
cccactgggtaaagctaaagaataaccgtcagcctgggtccaggtagatg
ccccatgctcatcgctctggccccagagtctagaggatgtgggaagggta
gggaaagctctgcagcctccttcccaagctctcatcccaggatgcctgca
gttatccacagtagtgtgccagccttgagatacacacacccaacaggcac
ctccagagtgcaggttgcactccccagcaaaacagagcagctgccagctt
tcttcagagcagcatggtatggggtttctctggcctcccgctttcatggt
gccatagaaactagagagaccacatatgggctagtggaagcatgaacagc
tctgttcaagcccacagtgttcctgcctgccatgctggactttaagccaa
atttaactccactgggctaggtgagagtgacaggtttgaatgtccctcag
cagtcacttgcctgggaaccttgatcttcggcttttcatgaagctgtgtt
caccactggctttccattttcaagcagatctcagagtgcagctcatcctc
tcccataactgaagcgctgaagcaggtggctacactgtggctatactgtg
gcttacactgtgtaagtatgtatacttaccaataagcaaaggatactagg
agttcttctcgggaacttggtgcctcttccagactttggaagccagtctt
ccatttcttcaagggcttctttccttacaatcaaggtcactctgtctttc
ttcttctatcccagctagctaggatggtgaaaattctttggcttaactat
cgagccagttgtgacctgccaggtactgggcctggcatcatattctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_63317734_63318924
seq2: B6Ng01-348O24.b_45_1228 (reverse)

seq1  CATTTCCT-CTTGCCTTCTTGGTGGAGATAATTGCCTCTCTCATCTTTAT  49
      |||||||| ||||||||  | ||||||||||||||   ||||||||    
seq2  CATTTCCTCCTTGCCTTTCTAGTGGAGATAATTGC--TTCTCATCT---G  45

seq1  TTTAACCTTTCTG-TATACTAGGTCCATGATGCCAGCATTTAAACATTCT  98
       || ||||||||| ||||||| ||| ||||||| ||||||||||||||||
seq2  ATTGACCTTTCTGTTATACTAAGTCAATGATGCAAGCATTTAAACATTCT  95

seq1  CGAGCAAAACCACCATCTTCATCTTGATGGACTGATTACTCACTAGCCTC  148
      ||||| ||| ||||||  |||||||||| |||||| ||||||||||||  
seq2  CGAGC-AAATCACCATTCTCATCTTGATTGACTGA-TACTCACTAGCCCT  143

seq1  CCTGCCCTTTACAGCTTAACTCAAAACTGGGTTTTCATACAAGTGTACTT  198
      ||||||| |||||||||||||||||||||| |||||||||||||||||||
seq2  CCTGCCC-TTACAGCTTAACTCAAAACTGGATTTTCATACAAGTGTACTT  192

seq1  TCATCCTTCTTTCTTTCTCAATTTTTTTTTAAAAAAAGCTTTCTGTCCTT  248
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TCATCCTTCTTTCTTTCTCAATTTTTTTTTAAAAAAAGCTTTCTGTCC-T  241

seq1  TACTTCACAAAAATGTATTGGTGATAGTAAGACAGACAAAGACCAAAAGA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTCACAAAAATGTATTGGTGATAGTAAGACAGACAAAGACCAAAAGA  291

seq1  TGTTTCTAACTTGCATGGTCTGTTTCTAAAGCTTTTCAAACCATCAACAC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCTAACTTGCATGGTCTGTTTCTAAAGCTTTTCAAACCATCAACAC  341

seq1  ACTATTAAGATAAACTCACACTTACTGCTTTTCCTAACTTGCCGACTGTT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATTAAGATAAACTCACACTTACTGCTTTTCCTAACTTGCCGACTGTT  391

seq1  TCTCAAGGCACAGTCAGGTCAAATCATCTGCATTTACTAATTAGGCCCTA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAAGGCACAGTCAGGTCAAATCATCTGCATTTACTAATTAGGCCCTA  441

seq1  TGGATGTACAACAGTTACAGTATAACATCAACTACCCAGTCAGCATTCTC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATGTACAACAGTTACAGTATAACATCAACTACCCAGTCAGCATTCTC  491

seq1  ACCCTTCAGTTATTTTATACATTTTGTTTTTGAAGGTTTAATCTTATTTT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTTCAGTTATTTTATACATTTTGTTTTTGAAGGTTTAATCTTATTTT  541

seq1  ATTCTGGATCCAAGTGAGGTCCATGCATCGTAACTGGCCCTTTGACTCTA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGGATCCAAGTGAGGTCCATGCATCGTAACTGGCCCTTTGACTCTA  591

seq1  TAAAGCCTTTCTGCATCTCTCTTTTCATTATATTTTTCAATAACAAAAAC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGCCTTTCTGCATCTCTCTTTTCATTATATTTTTCAATAACAAAAAC  641

seq1  AACACAACAGATTCGTTTTTGGGTGTATGTCCTAGAGTTCCCTATGATCT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACAACAGATTCGTTTTTGGGTGTATGTCCTAGAGTTCCCTATGATCT  691

seq1  TAATTTTCTGATTGTACCCCACTTTTGTTATTTAACCTCTTTTTCTGTCT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTTCTGATTGTACCCCACTTTTGTTATTTAACCTCTTTTTCTGTCT  741

seq1  CTTTTATTTCCCATGCAATTACTAGATCTAGAGGCTTGATCACACTGATA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTATTTCCCATGCAATTACTAGATCTAGAGGCTTGATCACACTGATA  791

seq1  TTCAATACAGAACAGGGGAGAAGAGTCAAATATATTTAAGAGAAGAGTAC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATACAGAACAGGGGAGAAGAGTCAAATATATTTAAGAGAAGAGTAC  841

seq1  TGTATAATTCTATCACATAGTACATAACATTGGATTTCTCTCCATATGTT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATAATTCTATCACATAGTACATAACATTGGATTTCTCTCCATATGTT  891

seq1  TAACATCCGTATGTTTAAGATGTTATATAAGCAAATGAGGTCACTATGTA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACATCCGTATGTTTAAGATGTTATATAAGCAAATGAGGTCACTATGTA  941

seq1  AAATTAACAAAAACATTGACTTATTAAGTTTCCTATATTCCCATATATAA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTAACAAAAACATTGACTTATTAAGTTTCCTATATTCCCATATATAA  991

seq1  AATGATACCCCATACATAAAATGCTAACCAAGTTGCCACCTCTTTTGAAG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATACCCCATACATAAAATGCTAACCAAGTTGCCACCTCTTTTGAAG  1041

seq1  CATTCAATGGTTTCTCACTGATCTTGGAATAAAATACAAAATCTTTTATA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCAATGGTTTCTCACTGATCTTGGAATAAAATACAAAATCTTTTATA  1091

seq1  AAAGGGTCGAAGGCCACCCCTGAATTGAACTTTGACTGTCTTTCCACTCT  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGGTCGAAGGCCACCCCTGAATTGAACTTTGACTGTCTTTCCACTCT  1141

seq1  CTTCTTACCAAATATGCCCAATACCAATGCCATAATAGAATTC  1191
      |||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTACCAAATATGCCCAATACCAATGCCATAATAGAATTC  1184

seq1: chr14_63221329_63222463
seq2: B6Ng01-348O24.g_65_1211

seq1  GAATTCCAGTGGAGCATCCAGCCCATGCTGCTCCAGAGGGAAGGGAGGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGTGGAGCATCCAGCCCATGCTGCTCCAGAGGGAAGGGAGGGA  50

seq1  GGCTGGCTTCACACCATCTCTGTTATCACTGCTGGGGCTCAGGAAGGCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGGCTTCACACCATCTCTGTTATCACTGCTGGGGCTCAGGAAGGCTG  100

seq1  CCCCTGAGAAGTGGCAGCCAACCCTGAGTCACAAGCTCCTGTTATACTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTGAGAAGTGGCAGCCAACCCTGAGTCACAAGCTCCTGTTATACTCC  150

seq1  TGTAAATCCCACTAGGGCCTGTCTGGATTCGCTCTCAGCCCCTATTGTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAATCCCACTAGGGCCTGTCTGGATTCGCTCTCAGCCCCTATTGTTC  200

seq1  CCAGTCAAGCAGAGAGGCAGGAAACAAAAAGCCAGCCCCAGGGAAACACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTCAAGCAGAGAGGCAGGAAACAAAAAGCCAGCCCCAGGGAAACACA  250

seq1  TCAGAGGCTCCATCCTTGGAACAGTGGGCTGTCTTTAGGTCTGATGAGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGGCTCCATCCTTGGAACAGTGGGCTGTCTTTAGGTCTGATGAGAT  300

seq1  CCCACTGGGTAAAGCTAAAGAATAACCGTCAGCCTGGGTCCAGGTAGATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACTGGGTAAAGCTAAAGAATAACCGTCAGCCTGGGTCCAGGTAGATG  350

seq1  CCCCATGCTCATCGCTCTGGCCCCAGAGTCTAGAGGATGTGGGAAGGGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCATGCTCATCGCTCTGGCCCCAGAGTCTAGAGGATGTGGGAAGGGTA  400

seq1  GGGAAAGCTCTGCAGCCTCCTTCCCAAGCTCTCATCCCAGGATGCCTGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAAGCTCTGCAGCCTCCTTCCCAAGCTCTCATCCCAGGATGCCTGCA  450

seq1  GTTATCCACAGTAGTGTGCCAGCCTTGAGATACACACACCCAACAGGCAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATCCACAGTAGTGTGCCAGCCTTGAGATACACACACCCAACAGGCAC  500

seq1  CTCCAGAGTGCAGGTTGCACTCCCCAGCAAAACAGAGCAGCTGCCAGCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGAGTGCAGGTTGCACTCCCCAGCAAAACAGAGCAGCTGCCAGCTT  550

seq1  TCTTCAGAGCAGCATGGTATGGGGTTTCTCTGGCCTCCCGCTTTCATGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCAGAGCAGCATGGTATGGGGTTTCTCTGGCCTCCCGCTTTCATGGT  600

seq1  GCCATAGAAACTAGAGAGACCACATATGGGCTAGTGGAAGCATGAACAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATAGAAACTAGAGAGACCACATATGGGCTAGTGGAAGCATGAACAGC  650

seq1  TCTGTTCAAGCCCACAGTGTTCCTGCCTGCCATGCTGGACTTTAAGCCAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTCAAGCCCACAGTGTTCCTGCCTGCCATGCTGGACTTTAAGCCAA  700

seq1  ATTTAACTCCACTGGGCTAGGTGAGAGTGACAGGTTTGAATGTCCCTCAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAACTCCACTGGGCTAGGTGAGAGTGACAGGTTTGAATGTCCCTCAG  750

seq1  CAGTCACTTGCCTGGGAACCTTGATCTTCGGCTTTTCATGAAGCTGTGTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCACTTGCCTGGGAACCTTGATCTTCGGCTTTTCATGAAGCTGTGTT  800

seq1  CACCACTGGC-TTCCATTTTCAAGCAGATC-CAGAGTGCAGC-CATCCTC  847
      |||||||||| ||||||||||||||||||| ||||||||||| |||||||
seq2  CACCACTGGCTTTCCATTTTCAAGCAGATCTCAGAGTGCAGCTCATCCTC  850

seq1  CCCCATAACTGAAGCGCTGAAGCA-GTGGCTACACTGTGGCTATACTGTG  896
       ||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TCCCATAACTGAAGCGCTGAAGCAGGTGGCTACACTGTGGCTATACTGTG  900

seq1  GC-TACACTGTGTAAGTATGTATACTTACCAATAAGCAAAGGATACTA-G  944
      || ||||||||||||||||||||||||||||||||||||||||||||| |
seq2  GCTTACACTGTGTAAGTATGTATACTTACCAATAAGCAAAGGATACTAGG  950

seq1  AGTTCTCCCCGGGAACT--GTGCC-CTTCCAGACTTT-GAAG-CAGTC-T  988
      |||||| | ||||||||  ||||| |||||||||||| |||| ||||| |
seq2  AGTTCTTCTCGGGAACTTGGTGCCTCTTCCAGACTTTGGAAGCCAGTCTT  1000

seq1  CCATTCCT--CAGGGCTTCCTTCC-TACAA-CAAGTTCACTCTGTCTT--  1032
      ||||| ||   |||||||| |||| ||||| |||| ||||||||||||  
seq2  CCATTTCTTCAAGGGCTTCTTTCCTTACAATCAAGGTCACTCTGTCTTTC  1050

seq1  CTCTTCTA-CCCAGCTAAGCTTAAGGATGGTGAAAATCCTTTGTCTTAA-  1080
       ||||||| ||||||| ||||  |||||||||||||| ||||| ||||| 
seq2  TTCTTCTATCCCAGCT-AGCT--AGGATGGTGAAAATTCTTTGGCTTAAC  1097

seq1  -AACCACCAGCAGTTGTGAACTTTCTCAGTGTACTTGGGCCTTGCATCAT  1129
       | | | |  ||||||||| |  |  ||| |||| ||||||| |||||||
seq2  TATCGAGC--CAGTTGTGACC--TGCCAG-GTAC-TGGGCCTGGCATCAT  1141

seq1  ATTCTT  1135
      ||||||
seq2  ATTCTT  1147