Query= MSMg01no045_i24.b1 MSMg01no045_i24.b1 CHROMAT_FILE:
MSMg01no045_i24.b1 PHD_FILE: MSMg01no045_i24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:05:33 2005
(495 letters)
>mm_chr14_78555312_78556206
Length = 895
Score = 919 bits (475), Expect = 0.0
Identities = 490/495 (98%)
Strand = Plus / Plus
Query: 1 agatgggaggtgtgttaataaaccttcttcactgtttatagaaagggcagctctctaagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agatgggaggtgtgttaataaaccttcttcactgtttatagaaagggcagctctctaagc 260
Query: 61 tggtacgttttcattattgttagtgttataagaggcttgaggccagagagcatttgatat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tggtacgttttcattattgttagtgttataagaggcttgaggccagagagcatttgatat 320
Query: 121 gattctctggtttctttgtatagagcatagtacactctattttagagtctgcttcttttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gattctctggtttctttgtatagagcatagtacactctattttagagtctgcttcttttc 380
Query: 181 cattcccagattactcaaattcttggaaaagatgtagttctgattaatcttagtgagctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cattcccagattactcaaattcttggaaaagatgtagttctgattaatcttagtgagctg 440
Query: 241 atcgctttgattatattgactatctatcaagtgccatttggtctgctatcaatcattagc 300
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atcactttgattatattgactatctatcaagtgccatttggtctgctatcaatcattagc 500
Query: 301 agtctgcattctatttccagaactacttagctgaatgagactcagctcatttttataata 360
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agcctgcattctatttccagaactacttagctgaatgagactcagctcatttttataata 560
Query: 361 gagcttgtcataagcatgaaggtgaacatgcagctcctgactcataaaatgcataaatcc 420
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gggcttgtcataagcatgaaggtgaacatgcagctcctgactcataaaatgcataaatcc 620
Query: 421 tgtgtgtgttcacaggaggaaatgactgtagccagctgataggatcaaggaaacagcatg 480
|||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||
Sbjct: 621 tgtgtgtgttcacaggaggaaaagactgtagccagttgataggatcaaggaaacagcatg 680
Query: 481 ggggccttgaagagg 495
|||||||||||||||
Sbjct: 681 ggggccttgaagagg 695
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 495
Length of database: 895
Length adjustment: 10
Effective length of query: 485
Effective length of database: 885
Effective search space: 429225
Effective search space used: 429225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no045_i24.g1 MSMg01no045_i24.g1 CHROMAT_FILE:
MSMg01no045_i24.g1 PHD_FILE: MSMg01no045_i24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:05:33 2005
(462 letters)
>mm_chr14_78665898_78666759
Length = 862
Score = 841 bits (435), Expect = 0.0
Identities = 456/463 (98%), Gaps = 2/463 (0%)
Strand = Plus / Minus
Query: 1 tttcaggttcagggcaactacatgggcccccacaggagtggggtgaagaccacatgggca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 tttcaggttcagggcaactacatgggcccccacaggagtggggtgaagaccacatgggca 603
Query: 61 gagactacgatgctgtgagatcaggatcctagaccagttttcaatgatcatttttaactt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 gagactacgatgctgtgagatcaggatcctagaccagttttcaatgatcatttttaactt 543
Query: 121 ggggtaaaagcttaactttcctctaatgccacttcattgttcataaaattgaaatcataa 180
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 542 ggggtaaaagcttaactttcctctaacgccacttcattgttcataaaattgaaatcataa 483
Query: 181 cggccatctaatgtacctctctaataaccaagtaacttatcttctgggtttccgagagtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 cggccatctaatgtacctctctaataaccaagtaacttatcttctgggtttccgagagtt 423
Query: 241 catgtaaactacacatatagatatcgagaatgaagtgaatgagggactgagtcgg-ctgg 299
||||||||| |||||| |||||||||||||||||||||| ||||||||||||||| | |
Sbjct: 422 catgtaaacaacacatgtagatatcgagaatgaagtgaacgagggactgagtcggtcag- 364
Query: 300 cgctcacagctttcctgagctttctccacgtctgctcattcttgaccctggtttggtgcc 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 cgctcacagctttcctgagctttctccacgtctgctcattcttgaccctggtttggtgcc 304
Query: 360 acctcctcaccaatgagcattcctaggggacacccaagggaccagtcagttcttgcccag 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 acctcctcaccaatgagcattcctaggggacacccaagggaccagtcagttcttgcccag 244
Query: 420 gtttctggagtgaactttgtgttcagatcattacaacattaat 462
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 gtttctggagtgaactttgtgttcagatcattacaacattaat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 462
Length of database: 862
Length adjustment: 10
Effective length of query: 452
Effective length of database: 852
Effective search space: 385104
Effective search space used: 385104
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
