Query= MSMg01no046_h11.b1 MSMg01no046_h11.b1 CHROMAT_FILE:
MSMg01no046_h11.b1 PHD_FILE: MSMg01no046_h11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:06:38 2005
(379 letters)
>mm_chr14_81342285_81343062
Length = 778
Score = 673 bits (348), Expect = 0.0
Identities = 369/376 (98%), Gaps = 3/376 (0%)
Strand = Plus / Plus
Query: 5 gaattcctgcattatacgttaaaagta-ttactagacaaaaagaactcagaaaagataca 63
|||||||||||||||| |||||||||| |||||||||||||||||||||||||||| ||
Sbjct: 205 gaattcctgcattataggttaaaagtaattactagacaaaaagaactcagaaaagaaact 264
Query: 64 aaatttgcattcagataccccctgtgtttaattttttgcaatgatatttataatctgtat 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aaatttgcattcagataccccctgtgtttaattttttgcaatgatatttataatctgtat 324
Query: 124 acactgaaatttcagggagctagaaagatgccttagtgtgtcagagtactttccgaggac 183
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 acactgtaatttcagggagctagaaagatgccttagtgtgtcagagtactttccgaggac 384
Query: 184 acagttcagttccctgtacccatatcaattttaggaggtccaatacactcttcattcagg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 acagttcagttccctgtacccatatcaattttaggaggtccaatacactcttcattcagg 444
Query: 244 cctctgcaggcactgtcttcaggtggtatactgtacccagagacaagcagacaaaaacac 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 cctctgcaggcactgtcttcaggtggtatactgtacccagagacaagcagacaaaaacac 504
Query: 304 gttttcaaattattagttaattaaaaaaatcacatcatcaatttttatttgagattatac 363
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 505 gttttcaaattattagttaattaaaaaa-tcacatcatcaatttttatttgagattatac 563
Query: 364 ccttaatcccaccatt 379
| ||||||||||||||
Sbjct: 564 c-ttaatcccaccatt 578
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 379
Length of database: 778
Length adjustment: 9
Effective length of query: 370
Effective length of database: 769
Effective search space: 284530
Effective search space used: 284530
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no046_h11.g1 MSMg01no046_h11.g1 CHROMAT_FILE:
MSMg01no046_h11.g1 PHD_FILE: MSMg01no046_h11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:06:38 2005
(617 letters)
>mm_chr14_81499904_81500920
Length = 1017
Score = 1170 bits (605), Expect = 0.0
Identities = 614/617 (99%)
Strand = Plus / Minus
Query: 1 tatagcaacaaaatatgaataaaataaaaggttactgcattaaataatttagttggttag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 817 tatagcaacaaaatatgaataaaataaaaggttactgcattaaataatttagttggttag 758
Query: 61 caataattggtcaatttgtgagacaaggtgaattgaaattacctttttgtggcaccagaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 757 caataattggtcaatttgtgagacaaggtgaattgaaattacctttttgtggcaccagaa 698
Query: 121 tacatggtcattgacctccagatacaactaactatccaaatatatgaccagaatgtgtca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 697 tacatggtcattgacctccagatacaactaactatccaaatatatgaccagaatgtgtca 638
Query: 181 gaatgtagggtcattgtctcagaaatacattatcaaacaatggtaccataactgaaaatt 240
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 637 gaatgtagggtcattgtctcagaaatacattatcaaacaatgggaccataactgaaaatt 578
Query: 241 ccaataagaaatgaagctatcaaggaaatgatcaatggaaacacaaagaaaaactcaggg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 ccaataagaaatgaagctatcaaggaaatgatcaatggaaacacaaagaaaaactcaggg 518
Query: 301 gacaattaattgggatggcttcaatatatgtgtcagagattaaggcaataaaatggagct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 gacaattaattgggatggcttcaatatatgtgtcagagattaaggcaataaaatggagct 458
Query: 361 ggaagatggtcagacatttacatatacaaattcagtacacacaattataagagtttatga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 ggaagatggtcagacatttacatatacaaattcagtacacacaattataagagtttatga 398
Query: 421 tggtatgactaaagttgatcagtggttaaagttagtcagcacttagtagtggtgaaaaaa 480
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 tggtatgacttaagttgatcagtggttaaagttagtcagcacttagtagtggtgaaaaaa 338
Query: 481 ctgtttggatcattggataagacactttggcacttaggagttcagcaaagaacacatgtc 540
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 cagtttggatcattggataagacactttggcacttaggagttcagcaaagaacacatgtc 278
Query: 541 caaagtgaacaaagaaacaggcatttgtcaaaaaacagcaaagagacattttaccatgtt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 caaagtgaacaaagaaacaggcatttgtcaaaaaacagcaaagagacattttaccatgtt 218
Query: 601 tcgtctaggtgaaatga 617
|||||||||||||||||
Sbjct: 217 tcgtctaggtgaaatga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 617
Length of database: 1017
Length adjustment: 10
Effective length of query: 607
Effective length of database: 1007
Effective search space: 611249
Effective search space used: 611249
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
