CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCACTCAACAGCTCACAAAGAAAGTATTTTACTCTTAATGTCTGATC
CAAACTCTTCTGTGTTCATTATTCCAAAGATTGAAGAAGTATGGCTCAAA
GTTTTGTAATATAGGCCCATAACATTCTGAAATACACCGCTTTTTATTAC
ATTTGGTATTGTTTTACTCAGACAATAAGCTACAATGGAGATCAGTGTCC
TTGCAATGTCATCTTCTACTCCTACCAGGTAACACATGTGTTAACACAGA
CACAGGTTGCTTCTGTTTCTATACCTATTCCTGCAAGATTGTGGCTTTCT
CCATGGTGTCACTGTTGTCAAAGGCTGTTGGAAGGGATAAGTAATTACTA
ATGGCTGTCTGTAATGTTGTTCACCGAATGCCATTGTTTTCCATCATCAT
TTTACAGCTGGGAAACTTTTAATTCTAATACAGCAGTCCCAAAACAGTGC
ATTGTATGGAGATAGGTTGCCTTACCGTGGTAAATTAGGGAATTCTGCTA
CATATAGCCAATTTGTTGTGCTCCATTCCAGCCTTAAAGTTTCATTTAAT
TTTCCTTTCAAGAACTTGACGCATCTGTTCCCATGTGGCTTGCGCCAAGG
TGTCATCCCTGACTGTAGGGGCTAGGTTTTAACAGACATACTCCGGAC

CATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTTGTTATGCTGTTCTTTGTTTGTGT
GTTTAAAGTAATATATAAAATTCACGGCATTATATTACCTGTACTTTCTG
GAATATTTTGATTCAAATTTTAAATCATCTAGATACATTTTTTATTCCAG
AACCTGCAATGTTGAATAGTTCATAAAACGTTAGCAATTTTCTTATATTA
GATGGTCAATAGTCTAAAATTGAAAGTATTAGTGATTGAAAATTTCATTT
TCAGTTCTTAACTCCAAGACTTAATAAATTATGTATTTTAATAAATTATT
GGGAAGGATTATCCTTGAAGTTATTGCTGAGTATCTTGTACGAACACAGA
TCAACTAATTAGGAAGTGTAAAAGTATTACTCCCAGCAGGTTCTATGGGT
TTATGCCAAGACGTGTTTTCCATCCTAGAGAGGCGATCTAAAGAAACATC
CATCAAACAATTCCCTAAAGGGCTAGGATTAGCCAAATCCTATTCTATTG
ATGTGGTGTATGGATTTGTTGCAGTGCCAGCTGTATTCCAAGATCATGGG
ACAAGCTTAATGTTAGTGACAGTTATGGACCATGCCAGNTGTTTGTACGC
TAAGACATTGGAATTGCCTAGCTTTGCTTAATAAAAGGCAAACTATTCAC
ATTA

Query= MSMg01no047_g03.b1 MSMg01no047_g03.b1 CHROMAT_FILE:
MSMg01no047_g03.b1 PHD_FILE: MSMg01no047_g03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:07:42 2005
         (380 letters)



>mm_chr14_83662456_83663235
          Length = 780

 Score =  696 bits (360), Expect = 0.0
 Identities = 372/376 (98%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcactcaacagctcacaaagaaagtattttactcttaatgtctgatccaaactctt 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcactcaacagctcacaaagaaagtattttactcttaatgtctgatccaaactctt 264

                                                                       
Query: 65  ctgtgttcattattccaaagattgaagaagtatggctcaaagttttgtaatataggccca 124
           ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ctgtgttcattattttaaagattgaagaagtatggctcaaagttttgtaatataggccca 324

                                                                       
Query: 125 taacattctgaaatacaccgctttttattacatttggtattgttttactcagacaataag 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 taacattctgaaatacaccgctttttattacatttggtattgttttactcagacaataag 384

                                                                       
Query: 185 ctacaatggagatcagtgtccttgcaatgtcatcttctactcctaccaggtaacacatgt 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ctacaatggagatcagtgtccttgcaatgtcatcttctactcctaccaggtaacacatgt 444

                                                                       
Query: 245 gttaacacagacacaggttgcttctgtttctatacctattcctgcaagattgtggctttc 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 445 gttaacacagacacaggttgcttctgtttctatacctattcctgcaagattgtggttttc 504

                                                                       
Query: 305 tccatggtgtcactgttgtcaaaggctgttggaagggataagtaattactaatggctgtc 364
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 505 tccatggtgtcactgttgtcaaaggttgttggaagggataagtaattactaatggctgtc 564

                           
Query: 365 tgtaatgttgttcacc 380
           ||||||||||||||||
Sbjct: 565 tgtaatgttgttcacc 580


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 380
Length of database: 780
Length adjustment: 9
Effective length of query: 371
Effective length of database: 771
Effective search space:   286041
Effective search space used:   286041
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no047_g03.g1 MSMg01no047_g03.g1 CHROMAT_FILE:
MSMg01no047_g03.g1 PHD_FILE: MSMg01no047_g03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:07:42 2005
         (579 letters)



>mm_chr14_83720190_83721168
          Length = 979

 Score =  930 bits (481), Expect = 0.0
 Identities = 495/500 (99%)
 Strand = Plus / Minus

                                                                       
Query: 80  attttgattcaaattttaaatcatctagatacattttttattccagaacctgcaatgttg 139
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 979 attttgattcaaattttaaatcatctagatacattttttattccagaacctgcaatgttg 920

                                                                       
Query: 140 aatagttcataaaacgttagcaattttcttatattagatggtcaatagtctaaaattgaa 199
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 919 aatagttcataaaacgttagcaattttcttatattagatggtcaatagtctaaaattgaa 860

                                                                       
Query: 200 agtattagtgattgaaaatttcattttcagttcttaactccaagacttaataaattatgt 259
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 859 agtattagtgattgaaaatttcattttcagttcttaactccaagacttaataaattatgt 800

                                                                       
Query: 260 attttaataaattattgggaaggattatccttgaagttattgctgagtatcttgtacgaa 319
           ||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||
Sbjct: 799 attttaataaattattgggtaggatcatccttgaagttattgctgagtatcttgtacgaa 740

                                                                       
Query: 320 cacagatcaactaattaggaagtgtaaaagtattactcccagcaggttctatgggtttat 379
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 cacagatcaactaattaggaagtgtaaaagtattactcccagcaggttctatgggtttat 680

                                                                       
Query: 380 gccaagacgtgttttccatcctagagaggcgatctaaagaaacatccatcaaacaattcc 439
           |||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 679 gccaaggcgtgttttccatcctagagaggctatctaaagaaacatccatcaaacaattcc 620

                                                                       
Query: 440 ctaaagggctaggattagccaaatcctattctattgatgtggtgtatggatttgttgcag 499
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 ctaaagggctaggattagccaaatcctattctattgatgtggtgtatggatttgttgcag 560

                                                                       
Query: 500 tgccagctgtattccaagatcatgggacaagcttaatgttagtgacagttatggaccatg 559
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 tgccagctgtattccaagatcatgggacaagcttaatgttagtgacagttatggaccatg 500

                               
Query: 560 ccagntgtttgtacgctaag 579
           |||| |||||||||||||||
Sbjct: 499 ccagttgtttgtacgctaag 480


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 579
Length of database: 979
Length adjustment: 10
Effective length of query: 569
Effective length of database: 969
Effective search space:   551361
Effective search space used:   551361
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)