Query= MSMg01no047_l22.b1 MSMg01no047_l22.b1 CHROMAT_FILE:
MSMg01no047_l22.b1 PHD_FILE: MSMg01no047_l22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:08:08 2005
(624 letters)
>mm_chr14_121566165_121567189
Length = 1025
Score = 1017 bits (526), Expect = 0.0
Identities = 582/622 (93%), Gaps = 34/622 (5%)
Strand = Plus / Plus
Query: 4 ggaattc-cacagagccatttgcagaaggctgcttgtcttcatcccctgcctctctgtac 62
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcacacagagccatttgcagaaggctgcttgtcttcatcccctgcctctctgtac 263
Query: 63 attgtattctgtctcagtggcccatggctttggtctgagttctttctgtggagtttatac 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 attgtattctgtctcagtggcccatggctttggtctgagttctttctgtggagtttatac 323
Query: 123 cttgcatatgtgaaagagcagcccagaaacacatgtagtaaaaccatgcccaaatcttag 182
||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 324 cttgcatatgtgaaagagcagcccagaaacacatgtagtaaaagcatgctcaaatcttag 383
Query: 183 caggtatcacctcaggtgccagtagtacagtagtgacgtgaccgagcatgtcacaatatt 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 caggtatcacctcaggtgccagtagtacagtagtgacgtgaccgagcatgtcacaatatt 443
Query: 243 ctattacaacaagacagacaaaggactggctacttgatatgctggcaggaagcaccaaga 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ctattacaacaagacagacaaaggactggctacttgatatgctggcaggaagcaccaaga 503
Query: 303 aggggaaaacaaaacaaaacaaaaaagtcgaggaaggaaaagagggtggggtggatcgca 362
|||||||||||||||||||| |||||||
Sbjct: 504 aggggaaaacaaaacaaaac---------------------------------gatcgca 530
Query: 363 cctgtgcattatgtcatttggcggatacgtagatgtaacttaaaaccaactggagtttgg 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 cctgtgcattatgtcatttggcggatacgtagatgtaacttaaaaccaactggagtttgg 590
Query: 423 gaggatgtatacctctggatgtgtatataaacgcaacagtctgattcttgtctaattctt 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 gaggatgtatacctctggatgtgtatataaacgcaacagtctgattcttgtctaattctt 650
Query: 483 gatacgatttgagtgttcaaaactgacctctgcttgtcactgggaagatggctcagtcaa 542
|||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 651 gatacggtttgagtgttcaaaactgacctctgcttgtcgctgggaagatggctcagtcaa 710
Query: 543 caaagtacccgccttacaagtgcaggatccttagcaccgacatagaaagccagcatgttg 602
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 711 caaaatacccgccttacaagtgcaggatccttagcaccgacatagaaagccagcatggtg 770
Query: 603 gtacacacatctgtagtcctac 624
||||||||||||||||||||||
Sbjct: 771 gtacacacatctgtagtcctac 792
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 624
Length of database: 1025
Length adjustment: 10
Effective length of query: 614
Effective length of database: 1015
Effective search space: 623210
Effective search space used: 623210
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no047_l22.g1 MSMg01no047_l22.g1 CHROMAT_FILE:
MSMg01no047_l22.g1 PHD_FILE: MSMg01no047_l22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:08:08 2005
(590 letters)
>mm_chr14_121603395_121604384
Length = 990
Score = 704 bits (364), Expect = 0.0
Identities = 376/380 (98%)
Strand = Plus / Minus
Query: 1 ttagcaggagagaggggaaagaatatccaaagttcaaggttaccttcaaaggaggcaaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttagcaggagagaggggaaagaatatccaaagttcaaggttaccttcaaaggaggcaaag 322
Query: 61 cacaaagatggtgaggagatatctagaaagctattttctcagagtggccttgctatcagg 120
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 321 cacaaagatggtgaggagatatctagaaagctattttctcagagtggtcttgctatcagg 262
Query: 121 tgaaaatccacgtaggacaacagtgactgagtaggacacaggtgtgctgcagatatatat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgaaaatccacgtaggacaacagtgactgagtaggacacaggtgtgctgcagatatatat 202
Query: 181 tttttaattgtattatactttgtatatgcctgtccacatgtgcctgcctggtgcccacag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttttaattgtattatactttgtatatgcctgtccacatgtgcctgcctggtgcccacag 142
Query: 241 aagccggaagagggcattggatcccaactgaaattacagatgtttacaggccacattgtg 300
|||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||
Sbjct: 141 aagccggaagagggcattggatcccaactgaaattatagatgtttacaggccaccttgtg 82
Query: 301 ggtattggaattgaacccaggtcctaagaacagcaagtactcttaatcacctctccagtc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 81 ggtattggaattgaacccaggtcctaagaacagcaagtactcttaatcacctctccagtc 22
Query: 361 tgctatgaatgttttgtttt 380
|||||||||||||||||||
Sbjct: 21 cgctatgaatgttttgtttt 2
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 590
Length of database: 990
Length adjustment: 10
Effective length of query: 580
Effective length of database: 980
Effective search space: 568400
Effective search space used: 568400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
