Query= MSMg01no047_p21.b1 MSMg01no047_p21.b1 CHROMAT_FILE:
MSMg01no047_p21.b1 PHD_FILE: MSMg01no047_p21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:08:26 2005
(663 letters)
>mm_chr14_66819580_66820642
Length = 1063
Score = 1017 bits (526), Expect = 0.0
Identities = 538/542 (99%), Gaps = 1/542 (0%)
Strand = Plus / Minus
Query: 5 gaattcatcttggttttgtcttgaagtcttctggagcgttcattccccaccctgtctcga 64
||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 541 gaatttatcttggttttgtcttgaagtcttctggagcgttcgttccccaccctgtctcga 482
Query: 65 tgcattcctcccacccatggtgggctctccagattgcagatgtcctttgggtgctgcttg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tgcattcctcccacccatggtgggctctccagattgcagatgtcctttgggtgctgcttg 422
Query: 125 acacgaggaaggtggaatctagctccccaaagcagcaggctctgcacccacttccactca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 acacgaggaaggtggaatctagctccccaaagcagcaggctctgcacccacttccactca 362
Query: 185 ctacatgacctgcccatccccacaagcctcccagactccccagaggaagaagataaaggt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ctacatgacctgcccatccccacaagcctcccagactccccagaggaagaagataaaggt 302
Query: 245 attgcaatacatagccctgccctaacttagcaagacacttaccccaagggcttcaaattt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 attgcaatacatagccctgccctaacttagcaagacacttaccccaagggcttcaaattt 242
Query: 305 agtcctgtcacctaactagatacagggaattaggggatggatgcttttgtaccccttaat 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 agtcctgtcacctaactagatacagggaattaggggatggatgcttttgtaccccttaat 182
Query: 365 tcgtatgttgaagttctaatccctaatatgatagataggaacataagaccctttggaaag 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tcgtatgttgaagttctaatccctaatatgatagataggaacataagaccctttggaaag 122
Query: 425 aactagcactgaatattagtgtgttccccaaaataccaatgttgaaacttaatatttaat 484
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 121 aactagcactgaatattagtgtgttccccaaaataccagtgttgaaacttaatatttaat 62
Query: 485 atggcaacatgggaaggcaaggcctttggggatgcgataaaatcatgaatggcattagaa 544
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 61 atggcaacatgggaaggcaaggccttt-gggatgcgataaaatcatgaatggcattagaa 3
Query: 545 gt 546
||
Sbjct: 2 gt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 663
Length of database: 1063
Length adjustment: 10
Effective length of query: 653
Effective length of database: 1053
Effective search space: 687609
Effective search space used: 687609
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no047_p21.g1 MSMg01no047_p21.g1 CHROMAT_FILE:
MSMg01no047_p21.g1 PHD_FILE: MSMg01no047_p21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:08:26 2005
(629 letters)
>mm_chr14_66795470_66796498
Length = 1029
Score = 1100 bits (569), Expect = 0.0
Identities = 590/597 (98%)
Strand = Plus / Plus
Query: 1 tctccaggtcatttctttccttccagtacatgggctgggtgtcagggtgacagtggggac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctccaggtcatttctttccttccagtacatgggctgggtgtcagggtgacagtggggac 260
Query: 61 tgaactctgattattgagtttggtgttagcctcctctctcttgccagtcctgggtacatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 261 tgaactctgattattgagtttggtgttagcctcctctctcttgccagtcctggatacatg 320
Query: 121 ttgcttaacaagatctgttaacagagaacccctagtccctcccagacttggacagcttgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttgcttaacaagatctgttaacagagaacccctagtccctcccagacttggacagcttgg 380
Query: 181 cttgaataaatctcatccacagagctcccaggtaccccagaaatgctcacctggggggca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cttgaataaatctcatccacagagctcccaggtaccccagaaatgctcacctggggggca 440
Query: 241 ccctcgatgcccagctgcaggactgcctgggtctcttccaatgggaggtacctgatggat 300
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 441 ccctcgatgcccagctgcaggactgcctgggtctcttccaatgggaggcacctgatggat 500
Query: 301 ctgatctgcttaaactcggccaggcaggtgggctgtgaaggaagcagagaagactgaaga 360
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 501 ttgatctgcttaaactcggccaggcaggtgggctgtgaaggaagcagggaagactgaaga 560
Query: 361 ccatttatcctcaggatctgaccaaggaaactggtcaagatgagggtgaagatgaggggt 420
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ccaattatcctcaggatctgaccaaggaaactggtcaagatgagggtgaagatgaggggt 620
Query: 421 gcggaatctctcttgaggatggagagaatatcgctggcaagtctgtttcagaaaccgaag 480
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||
Sbjct: 621 gcggaatctctcttgaggatggagagaatatcgctggcaagtctgtctcagaaaccaaag 680
Query: 481 atgctcaggttgcagaagaaaaaggggagaaaggtgctcttgccaagattgtatgtcagg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 atgctcaggttgcagaagaaaaaggggagaaaggtgctcttgccaagattgtatgtcagg 740
Query: 541 ttggggggtagagccagagctggacccaggttcccaggaagtcactagcttgtttta 597
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ttggggggtagagccagagctggacccaggttcccaggaagtcactagcttgtttta 797
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 629
Length of database: 1029
Length adjustment: 10
Effective length of query: 619
Effective length of database: 1019
Effective search space: 630761
Effective search space used: 630761
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|