Query= MSMg01no053_c19.b1 MSMg01no053_c19.b1 CHROMAT_FILE:
MSMg01no053_c19.b1 PHD_FILE: MSMg01no053_c19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:54:00 2005
(437 letters)
>mm_chr19_21042356_21043196
Length = 841
Score = 681 bits (352), Expect = 0.0
Identities = 413/436 (94%), Gaps = 10/436 (2%)
Strand = Plus / Plus
Query: 7 attctgcaccttccccca-cagtgctggtaccaaagaaacaaagcacttaagataatttg 65
|||||||||||||| | | |||||||| ||||||||||||||||||||||||||||||||
Sbjct: 207 attctgcaccttcctcaaacagtgctgctaccaaagaaacaaagcacttaagataatttg 266
Query: 66 agacattcaacagcaatacaaacaagtttagc-atttataaaaatagtggatgcattaga 124
||||||||||||||||||||||||||||| || |||||||||| ||||||||||||||||
Sbjct: 267 agacattcaacagcaatacaaacaagttt-gccatttataaaa-tagtggatgcattaga 324
Query: 125 aacaatgataatgatagcctcaggaagctttgtatttgcctgggttagggacattggcct 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aacaatgataatgatagcctcaggaagctttgtatttgcctgggttagggacattggcct 384
Query: 185 ttactaggtagaaagtgaacataaggtacatcaatggactatgacttaggccctaaaatt 244
||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||
Sbjct: 385 ttactaggtagaaagtgaacataaggtacatcagtggtctatgacttaggccctaaaatt 444
Query: 245 aacaacattgtcttttatagacctcacaatctctatattcaacctgttcatttccttttt 304
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 aataacattgtcttttatagacctcacaatctctatattcaacctgttcatttcctttc- 503
Query: 305 acttttaatacagactgatgggttaaaacagtagttggtagcccttaattgacactactg 364
|||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||
Sbjct: 504 acttttaatacagactgatgggttcaaacagtagttggtagcccttaactgacactactg 563
Query: 365 gtgtaaaaaaaaaaaaa-----ccccaaaccaaaatatgctccatttccaaaaccctctt 419
||||||||||||||||| ||| |||||||||||||||||||||||||||||| |||
Sbjct: 564 gtgtaaaaaaaaaaaaaaaaaacccaaaaccaaaatatgctccatttccaaaaccccctt 623
Query: 420 gggcatgtgactggtc 435
||| |||||| |||||
Sbjct: 624 gggtatgtgattggtc 639
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 437
Length of database: 841
Length adjustment: 9
Effective length of query: 428
Effective length of database: 832
Effective search space: 356096
Effective search space used: 356096
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no053_c19.g1 MSMg01no053_c19.g1 CHROMAT_FILE:
MSMg01no053_c19.g1 PHD_FILE: MSMg01no053_c19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:54:00 2005
(337 letters)
>mm_chr14_23447219_23447955
Length = 737
Score = 246 bits (127), Expect = 2e-69
Identities = 154/163 (94%)
Strand = Plus / Plus
Query: 175 gaagatgcaccagcagtccttacgcttctattactcactgatgctaactttgattccctc 234
|||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 375 gaagatgcgccagcagtccttacgcttctattactcaatgatgctaactttgattccctc 434
Query: 235 catacttgagagtcctatttaaactctttgaccacaagaactgacacatagtggctccta 294
|||| |||| ||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 catatttgaaagtccaacaaaaactctttgaccacaagaactgacacatagtggctccta 494
Query: 295 agcctgatagagacaggaatgatccattgatgctgtactgtag 337
|||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 495 agcctgatagagacaggaatgatccattgatgctatactgtag 537
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 337
Length of database: 737
Length adjustment: 9
Effective length of query: 328
Effective length of database: 728
Effective search space: 238784
Effective search space used: 238784
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
