Query= MSMg01no053_i10.b1 MSMg01no053_i10.b1 CHROMAT_FILE:
MSMg01no053_i10.b1 PHD_FILE: MSMg01no053_i10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:54:28 2005
(238 letters)
>mm_chr1_64074699_64075335
Length = 637
Score = 437 bits (226), Expect = e-127
Identities = 235/238 (98%), Gaps = 1/238 (0%)
Strand = Plus / Plus
Query: 1 cttccctcactggtcaagttgctgcctctcaccctacatctgaactactcacctgcttag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cttccctcactggtcaagttgctgcctctcaccctacatctgaactactcacctgcttag 260
Query: 61 aggtggtatctgagaattaaactttcaaaagcatttctctggttccaagcaccttctgtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aggtggtatctgagaattaaactttcaaaagcatttctctggttccaagcaccttctgtt 320
Query: 121 tccctcactgggctttgaagtgaaaaaaaacagtatcacccatctatctcttggcagctc 180
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 321 tccctcactgggctttgaagtgaaaaaaa-cagtatcacccatctatctcttggcagctc 379
Query: 181 ctagcccactcctcccgtttcttgtagcaggttcagtccctgtagccatggtttctaa 238
| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ccagcccactcctcccggttcttgtagcaggttcagtccctgtagccatggtttctaa 437
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 238
Length of database: 637
Length adjustment: 9
Effective length of query: 229
Effective length of database: 628
Effective search space: 143812
Effective search space used: 143812
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no053_i10.g1 MSMg01no053_i10.g1 CHROMAT_FILE:
MSMg01no053_i10.g1 PHD_FILE: MSMg01no053_i10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:54:28 2005
(440 letters)
>mm_chr14_98229767_98230606
Length = 840
Score = 851 bits (440), Expect = 0.0
Identities = 440/440 (100%)
Strand = Plus / Plus
Query: 1 actttgatctgtactttatgtacttgaccttgttgaatgaaaatgaagcattcagaagga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actttgatctgtactttatgtacttgaccttgttgaatgaaaatgaagcattcagaagga 260
Query: 61 aaatcgtacaaacacttaacttcagtcatttgctcagatattcatcaagcttccatgtca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaatcgtacaaacacttaacttcagtcatttgctcagatattcatcaagcttccatgtca 320
Query: 121 gttgataagtatctcaccaaacctgttttgcttgaataatcagtcttttctattttagtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gttgataagtatctcaccaaacctgttttgcttgaataatcagtcttttctattttagtt 380
Query: 181 ttatgactttaactcctgaggtttttcaaagagcaactgtgagtgaacacaacattcttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttatgactttaactcctgaggtttttcaaagagcaactgtgagtgaacacaacattcttc 440
Query: 241 ttcagagttctcatcttatcagagcccattcttatcgtaaggaatatgaattcattaaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttcagagttctcatcttatcagagcccattcttatcgtaaggaatatgaattcattaaac 500
Query: 301 cctataagcaaggaaaactatatgatcaatgatatggatagatatacccaatcctgaggt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cctataagcaaggaaaactatatgatcaatgatatggatagatatacccaatcctgaggt 560
Query: 361 agaaaacagaagatagtatggactttgaacattcataaatacaacagacttgggaatcaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agaaaacagaagatagtatggactttgaacattcataaatacaacagacttgggaatcaa 620
Query: 421 gtactattctgagctttgtt 440
||||||||||||||||||||
Sbjct: 621 gtactattctgagctttgtt 640
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 440
Length of database: 840
Length adjustment: 9
Effective length of query: 431
Effective length of database: 831
Effective search space: 358161
Effective search space used: 358161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
