Query= MSMg01no055_j15.b1 MSMg01no055_j15.b1 CHROMAT_FILE:
MSMg01no055_j15.b1 PHD_FILE: MSMg01no055_j15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:57:02 2005
(511 letters)
>mm_chr14_113107615_113108525
Length = 911
Score = 242 bits (125), Expect = 5e-68
Identities = 131/133 (98%)
Strand = Plus / Minus
Query: 2 cagtgtagaaagctatttggtgacaatttttgtctttattaaagaaataaccattaatta 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 cagtgtagaaagctatttggtgacaatttttgtctttattaaagaaataaccattaatta 275
Query: 62 tattctttctctctttttttttctcctcttcatcttttgccactgctggagaacaaattg 121
||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 tatactttctctctctttttttctcctcttcatcttttgccactgctggagaacaaattg 215
Query: 122 aaaaacaaaatat 134
|||||||||||||
Sbjct: 214 aaaaacaaaatat 202
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 511
Length of database: 911
Length adjustment: 10
Effective length of query: 501
Effective length of database: 901
Effective search space: 451401
Effective search space used: 451401
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no055_j15.g1 MSMg01no055_j15.g1 CHROMAT_FILE:
MSMg01no055_j15.g1 PHD_FILE: MSMg01no055_j15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:57:02 2005
(496 letters)
>mm_chr14_112966870_112967765
Length = 896
Score = 787 bits (407), Expect = 0.0
Identities = 473/495 (95%), Gaps = 5/495 (1%)
Strand = Plus / Plus
Query: 1 tcttaatgtacttagtgttttaaacaataatatctccttacccaagaacctgtttatgcc 60
||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||
Sbjct: 201 tcttaatgtacttagtgatttaaacaataatatctccttacccaagaatctgtttatgcc 260
Query: 61 ttctgattcaaggtctccttttcctcttttatatcactcgttctttaacacatcctccac 120
|||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||
Sbjct: 261 ttctgattcaaggtctccttttccacttttatatcacttgttctttaacacatcctccac 320
Query: 121 cttaaataaagcttccctttcctatcccattgtattgatttctagttttgtgtgctctac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cttaaataaagcttccctttcctatcccattgtattgatttctagttttgtgtgctctac 380
Query: 181 ctctataaaaatacaaaaacctagaaggtttcacattaggcagaagcatgttcggtttgt 240
||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 381 ctctataaaaatacaaaaacctagaaggtgtcacattaggcggaagcatgttcggtttgt 440
Query: 241 tttcctgaatcagagttatctaataaaatacatttctaggtccatccattttctagaaaa 300
||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||
Sbjct: 441 tttcctgaatcagagttatttaataaaatacatttctaggtccatccattttctggaaaa 500
Query: 301 tttatggct-aaataaagttacactatgtgtaggtatcacagagattgtttccctccata 359
|| |||||| ||| ||| ||||| ||||||||||||||||||||||| ||| || |||||
Sbjct: 501 ttcatggctgaaaaaaa-ttacattatgtgtaggtatcacagagattattttcc-ccata 558
Query: 360 tttttaaatacttcaacaacacta-ttattatttcaaatgaacgaacctaagctttaagt 418
|||||||||| ||||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct: 559 tttttaaatatttcaacaacac-agttattatttcaaatgaacgaacctaagctttaagc 617
Query: 419 cttgcttattgcctgcaagtttatgttaggtattgtgattcttgacatattctaaggatg 478
|||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 618 cttgctcattgcctgcaagtttatgttacgtattgtgattcttgacatattctaaggatg 677
Query: 479 ttctaagtggttccc 493
|||||||||||||||
Sbjct: 678 ttctaagtggttccc 692
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 496
Length of database: 896
Length adjustment: 10
Effective length of query: 486
Effective length of database: 886
Effective search space: 430596
Effective search space used: 430596
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
