Query= MSMg01no057_d11.b1 MSMg01no057_d11.b1 CHROMAT_FILE:
MSMg01no057_d11.b1 PHD_FILE: MSMg01no057_d11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:59:05 2005
(486 letters)
>mm_chr14_111249053_111249938
Length = 886
Score = 810 bits (419), Expect = 0.0
Identities = 450/467 (96%), Gaps = 14/467 (2%)
Strand = Plus / Minus
Query: 26 gcaaccaaatcttgggatacagaattcagcatttgaatacattgcagcacctgaccaacc 85
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 886 gcaaccaaatcttgggatacagaattcagcatttgaatacattgcagcacctgaccaacc 827
Query: 86 cacaacacatacacatgtacacaaatactgaaacacacacccacatacacacacc--cac 143
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 826 cacaacacatacacatgtacacaaatactgaaacacacacccacatacacacacccacac 767
Query: 144 acacacacacacacaaacacactcatatatgtgtatgtaaaaggatatgcatatatatat 203
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 766 acacacacacacacaaacacactcatatatgtgtatgtaaaaggatatgaatatatatat 707
Query: 204 gcatatgtatatctgatctcaaagaagacaagaaagaagtaattagattcaaatattcaa 263
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 706 gcatatgtatatctgatctc----aagacaagaaagaagtaattagattcaaatattcaa 651
Query: 264 taataatcatcatcatggaaaatctcaccaaagtccctgagatttttaaaagggagagtt 323
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 650 taataatcagcatcatggaaaatctcaccaaagtccctgagatttttaaaagggagagtt 591
Query: 324 tggtccaggctctgcttgcatactgcattctctttacaaagtttga----ccccattgaa 379
||| |||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 590 tggcccaggctctgcttgcatactgcattctctttacaaagtttgaggtt----attgaa 535
Query: 380 gaggcttctaaaggtcacccgagtggaaacagagtttgtaatgaagcgtcattttgtttc 439
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 gaggcttctaaaggtcacccgagtggaaacagagtttgtaatgaagcgtcattttgtttc 475
Query: 440 tctgtgaaaagcatcactcatgatttctatcttgacagttacttggc 486
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 tctgtgaaaagcatcactcatgatttctatcttgacagttacttggc 428
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 486
Length of database: 886
Length adjustment: 10
Effective length of query: 476
Effective length of database: 876
Effective search space: 416976
Effective search space used: 416976
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no057_d11.g1 MSMg01no057_d11.g1 CHROMAT_FILE:
MSMg01no057_d11.g1 PHD_FILE: MSMg01no057_d11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:59:05 2005
(196 letters)
>mm_chr14_111083726_111084321
Length = 596
Score = 371 bits (192), Expect = e-107
Identities = 195/196 (99%)
Strand = Plus / Plus
Query: 1 actctacagtacatactgtctataatagtaagaaaatgattttgttttattctctcatct 60
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actctacagtacatacagtctataatagtaagaaaatgattttgttttattctctcatct 260
Query: 61 cttccttattgggcactcaacttttagatgattaagatgatgcaatcttcctaaagtcct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cttccttattgggcactcaacttttagatgattaagatgatgcaatcttcctaaagtcct 320
Query: 121 tttgttgttttgtatattgaaaaacctgttaggcttcaatccactgcaattgaatttgtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttgttgttttgtatattgaaaaacctgttaggcttcaatccactgcaattgaatttgtc 380
Query: 181 atatgggtctagttgg 196
||||||||||||||||
Sbjct: 381 atatgggtctagttgg 396
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 196
Length of database: 596
Length adjustment: 8
Effective length of query: 188
Effective length of database: 588
Effective search space: 110544
Effective search space used: 110544
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
