Query= MSMg01no057_e10.b1 MSMg01no057_e10.b1 CHROMAT_FILE:
MSMg01no057_e10.b1 PHD_FILE: MSMg01no057_e10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:59:10 2005
(409 letters)
>mm_chr14_111249130_111249938
Length = 809
Score = 694 bits (359), Expect = 0.0
Identities = 381/391 (97%), Gaps = 6/391 (1%)
Strand = Plus / Minus
Query: 21 gcaaccaaatcttgggatacagaattcagcatttgaatacattgcagcacctgaccaacc 80
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 809 gcaaccaaatcttgggatacagaattcagcatttgaatacattgcagcacctgaccaacc 750
Query: 81 cacaacacatacacatgtacacaaatactgaaacacacacccacatacacacacc--cac 138
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 749 cacaacacatacacatgtacacaaatactgaaacacacacccacatacacacacccacac 690
Query: 139 acacacacacacacaaacacactcatatatgtgtatgtaaaaggatatgcatatatatat 198
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 689 acacacacacacacaaacacactcatatatgtgtatgtaaaaggatatgaatatatatat 630
Query: 199 gcatatgtatatctgatctcaaagaagacaagaaagaagtaattagattcaaatattcaa 258
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 629 gcatatgtatatctgatctc----aagacaagaaagaagtaattagattcaaatattcaa 574
Query: 259 taataatcagcatcatggaaaatctcaccaaagtccctgagatttttaaaagggagagtt 318
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 taataatcagcatcatggaaaatctcaccaaagtccctgagatttttaaaagggagagtt 514
Query: 319 tggtccaggctctgcttgcatactgcattctctttacaaagtttgaggttattgaacacg 378
||| |||||||||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct: 513 tggcccaggctctgcttgcatactgcattctctttacaaagtttgaggttattgaagagg 454
Query: 379 cttctaaaggtcacccgagtggaaacagagt 409
|||||||||||||||||||||||||||||||
Sbjct: 453 cttctaaaggtcacccgagtggaaacagagt 423
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 409
Length of database: 809
Length adjustment: 9
Effective length of query: 400
Effective length of database: 800
Effective search space: 320000
Effective search space used: 320000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no057_e10.g1 MSMg01no057_e10.g1 CHROMAT_FILE:
MSMg01no057_e10.g1 PHD_FILE: MSMg01no057_e10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:59:10 2005
(343 letters)
>mm_chr14_111083726_111084468
Length = 743
Score = 648 bits (335), Expect = 0.0
Identities = 341/343 (99%)
Strand = Plus / Plus
Query: 1 actctacagtacatacagtctataatagtaagaaaatgattttgttttattctctcatct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actctacagtacatacagtctataatagtaagaaaatgattttgttttattctctcatct 260
Query: 61 cttccttattgggcactcaacttttagatgattaagatgatgcaatcttcctaaagtcct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cttccttattgggcactcaacttttagatgattaagatgatgcaatcttcctaaagtcct 320
Query: 121 tttgctgttttgtatattgaaaaacctgttaggcttcaatccactgcaattgaatttgtc 180
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttgttgttttgtatattgaaaaacctgttaggcttcaatccactgcaattgaatttgtc 380
Query: 181 atatgggtctagttggtgggccatgggccaaactattatcaatagtgcacccagaacttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atatgggtctagttggtgggccatgggccaaactattatcaatagtgcacccagaacttg 440
Query: 241 tttcacatgtgatcttcattattaaatgaatatgttttaagtaacattaattcttatcga 300
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 441 tttcacatgtgatcttcattattaaatgaatacgttttaagtaacattaattcttatcga 500
Query: 301 tcactgaaatgagtctttccttaacattttcagcacctccctt 343
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tcactgaaatgagtctttccttaacattttcagcacctccctt 543
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 343
Length of database: 743
Length adjustment: 9
Effective length of query: 334
Effective length of database: 734
Effective search space: 245156
Effective search space used: 245156
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
