TATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCTTTTGTTGACCGCAGTAGCCCAGTGCCTACTAATTCTGCCCTCAGAAA
AGAGGAAGAAAGATCACAGGTTTGGGGTCAGCATGGCCTAAAACAAGACT
CAGTTCCCTGCGAAGTTCTTTGGCTATGTGTGTGCCTTTCACCTGTTTAG
TCCATACGACAGAGCGCTTTAAGGGAGTCCGAGCGGAAGTGTACTTAGCA
AAGTTAGGCCAAGCAAGTATTTCAAAGGGCGCGAGCGAGTGTGTGTGTGT
GTGTGTGTGTGTGTGTGTTGGGGGAGCGGTCTGCAGTGTTTTTAAAAACA
AAAGAAAATTCTTGATATTAGTGGGTTCCTCATCACCCCCATTTGTTTGT
TTTATGAGACAGACTCTCACTTTGTAGCCAAGGATAAGGCGACATCGTCA
ATCTCATATACAAGGATGGTACACCAGCCTTTAAGGCAATGGGCACTTCT
GGTCTGGAAGGGGAGAAATGTTTTCTGCAATGTTTCACAAAAAAAAAAAA
GTTCATTGGCCCACTAGTAAACCATTTAAAAAAATGCGTCCCCGATATGC
AATTTCTTGATGAGATTCAATCAATTACAGTAATGATAAAAACAGCCCTG
GTAAAGGGCAACTGTTATCTATCTGTCTGGCCAGTTACAGAAGTTTTGTT
TGGCTTGCTTTTTA

ATAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXATTTATAAGAAGAAAGTTGTTTAGAGGTT
CTCTAAACTGGAGTGGAGGGTTAAGAGGCATTTAATAAAGAATGGAAAAA
GACAAAGGATGGCTGTTCTTGGGGGTGGTAGAAATGGTCTCAAGTTCTGA
GGTTCTGAGAGCTGCACAACTCTACACTTTAACTTGGTGTTTATTGTGCT
ACTTGCATATTATTATATATTTTAGTACATAATTTTTTAGAGAATTGTTG
TCAATAAATGAAGACTACTTCGTTGTCATCTGTAATGTCAACTACTTGGC
AGATACCATGCCAGACCAATGAATATTAGATATAGGCATACTGTTGAGAT
CACTCTATAAACATTTATGAAAACTTGTATGTTTTACTTTGAATGAACAG
TCCGCAGGCATTAATGTGTTAGATGATATTTAGCAGAGTCTTACATGAAT
TCTTCATTTTGTTCTGTACAGTTATTTGGTTGAAAAAAATTTTTTTTGTT
TTGTTTTTTTTGTTTTTCGAGACAGGGTTTCTCTGTTTAACAATGGCTGT
CCTGGAACTCACTCTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCACC
TGCCTCTGCCTCCCAAGTGCTGGGATTAAAGGCATACGCCACTGCTGCCC
GGCTATTTGG

Query= MSMg01no057_k03.b1 MSMg01no057_k03.b1 CHROMAT_FILE:
MSMg01no057_k03.b1 PHD_FILE: MSMg01no057_k03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:59:38 2005
         (496 letters)



>mm_chr14_99662721_99663616
          Length = 896

 Score =  847 bits (438), Expect = 0.0
 Identities = 444/446 (99%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcttttgttgaccgcagtagcccagtgcctactaattctgccctcagaaaagagga 64
           |||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 gaattcttttgttgagtgcagtagcccagtgcctactaattctgccctcagaaaagagga 387

                                                                       
Query: 65  agaaagatcacaggtttggggtcagcatggcctaaaacaagactcagttccctgcgaagt 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 agaaagatcacaggtttggggtcagcatggcctaaaacaagactcagttccctgcgaagt 327

                                                                       
Query: 125 tctttggctatgtgtgtgcctttcacctgtttagtccatacgacagagcgctttaaggga 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 tctttggctatgtgtgtgcctttcacctgtttagtccatacgacagagcgctttaaggga 267

                                                                       
Query: 185 gtccgagcggaagtgtacttagcaaagttaggccaagcaagtatttcaaagggcgcgagc 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 gtccgagcggaagtgtacttagcaaagttaggccaagcaagtatttcaaagggcgcgagc 207

                                                                       
Query: 245 gagtgtgtgtgtgtgtgtgtgtgtgtgtgtgttgggggagcggtctgcagtgtttttaaa 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gagtgtgtgtgtgtgtgtgtgtgtgtgtgtgttgggggagcggtctgcagtgtttttaaa 147

                                                                       
Query: 305 aacaaaagaaaattcttgatattagtgggttcctcatcacccccatttgtttgttttatg 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146 aacaaaagaaaattcttgatattagtgggttcctcatcacccccatttgtttgttttatg 87

                                                                       
Query: 365 agacagactctcactttgtagccaaggataaggcgacatcgtcaatctcatatacaagga 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 86  agacagactctcactttgtagccaaggataaggcgacatcgtcaatctcatatacaagga 27

                                     
Query: 425 tggtacaccagcctttaaggcaatgg 450
           ||||||||||||||||||||||||||
Sbjct: 26  tggtacaccagcctttaaggcaatgg 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 496
Length of database: 896
Length adjustment: 10
Effective length of query: 486
Effective length of database: 886
Effective search space:   430596
Effective search space used:   430596
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no057_k03.g1 MSMg01no057_k03.g1 CHROMAT_FILE:
MSMg01no057_k03.g1 PHD_FILE: MSMg01no057_k03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:59:38 2005
         (639 letters)



>mm_chr14_99593057_99594095
          Length = 1039

 Score = 1236 bits (639), Expect = 0.0
 Identities = 639/639 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atttataagaagaaagttgtttagaggttctctaaactggagtggagggttaagaggcat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atttataagaagaaagttgtttagaggttctctaaactggagtggagggttaagaggcat 260

                                                                       
Query: 61  ttaataaagaatggaaaaagacaaaggatggctgttcttgggggtggtagaaatggtctc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttaataaagaatggaaaaagacaaaggatggctgttcttgggggtggtagaaatggtctc 320

                                                                       
Query: 121 aagttctgaggttctgagagctgcacaactctacactttaacttggtgtttattgtgcta 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aagttctgaggttctgagagctgcacaactctacactttaacttggtgtttattgtgcta 380

                                                                       
Query: 181 cttgcatattattatatattttagtacataattttttagagaattgttgtcaataaatga 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cttgcatattattatatattttagtacataattttttagagaattgttgtcaataaatga 440

                                                                       
Query: 241 agactacttcgttgtcatctgtaatgtcaactacttggcagataccatgccagaccaatg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agactacttcgttgtcatctgtaatgtcaactacttggcagataccatgccagaccaatg 500

                                                                       
Query: 301 aatattagatataggcatactgttgagatcactctataaacatttatgaaaacttgtatg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aatattagatataggcatactgttgagatcactctataaacatttatgaaaacttgtatg 560

                                                                       
Query: 361 ttttactttgaatgaacagtccgcaggcattaatgtgttagatgatatttagcagagtct 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttttactttgaatgaacagtccgcaggcattaatgtgttagatgatatttagcagagtct 620

                                                                       
Query: 421 tacatgaattcttcattttgttctgtacagttatttggttgaaaaaaattttttttgttt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tacatgaattcttcattttgttctgtacagttatttggttgaaaaaaattttttttgttt 680

                                                                       
Query: 481 tgttttttttgtttttcgagacagggtttctctgtttaacaatggctgtcctggaactca 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tgttttttttgtttttcgagacagggtttctctgtttaacaatggctgtcctggaactca 740

                                                                       
Query: 541 ctctgtagaccaggctggcctcgaactcagaaatccacctgcctctgcctcccaagtgct 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ctctgtagaccaggctggcctcgaactcagaaatccacctgcctctgcctcccaagtgct 800

                                                  
Query: 601 gggattaaaggcatacgccactgctgcccggctatttgg 639
           |||||||||||||||||||||||||||||||||||||||
Sbjct: 801 gggattaaaggcatacgccactgctgcccggctatttgg 839


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 639
Length of database: 1039
Length adjustment: 10
Effective length of query: 629
Effective length of database: 1029
Effective search space:   647241
Effective search space used:   647241
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)