Query= MSMg01no058_e10.b1 MSMg01no058_e10.b1 CHROMAT_FILE:
MSMg01no058_e10.b1 PHD_FILE: MSMg01no058_e10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:00:29 2005
(642 letters)
>mm_chr14_78600171_78601211
Length = 1041
Score = 1123 bits (581), Expect = 0.0
Identities = 626/645 (97%), Gaps = 12/645 (1%)
Strand = Plus / Plus
Query: 5 gaattcaatttccc--caatcacttggtggcttacaaccatctgtaataggatctgatcc 62
|||||||| ||||| |||||||||||| |||||||| ||||||||||||||||||||||
Sbjct: 202 gaattcaa-ttcccatcaatcacttggtagcttacaagcatctgtaataggatctgatcc 260
Query: 63 ctcttctcatatgcaggtgtagatgcagatatagttctc--atacattttaaaaacaaac 120
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 261 ctcttctcatatgcaggtgtagatgcagatatagttctcatatacattttaaaaacaaac 320
Query: 121 aataagaacgaccacaaaacagaaaaatctataaattatttggagtatgtaggaatgttt 180
|||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 321 aataagaatgaccacaaaac---aaaatctataaattatttggagtatgtaggaatgttt 377
Query: 181 tatgatagtgggtcttcttgttgaaggatggtttcctctgtgtatgattttgtgcttttg 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 378 tatgatagtgggtcttcttgttgaaggatggtttcctctgtgtatgattttgtgattttg 437
Query: 241 tttttgcttgcttgtttgtttaagctttattccagaacatagttttaatttatgggagaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 438 tttttgcttgcttgtttgtttaagctttattccagaacatagttttaatttatggga-aa 496
Query: 301 aaagaagaaaggaa---aaaaaagactcccagattttatgcattattatagttgtgtaga 357
|||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 497 aaagaagaaaggaaaataaaaaagactcccagatttcatgcattattatagttgtgtaga 556
Query: 358 caaatatactatcatatgggtgatgaatcccgtcacctgcacatgctttgaaaacagtga 417
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 557 caaatatactatcatatgggtgatgaatcccgtcatctgcacatgctttgaaaacagtga 616
Query: 418 tggacatggaagaaaacagagcactcactgggtttaaatattatatttggggttcatgaa 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 tggacatggaagaaaacagagcactcactgggtttaaatattatatttggggttcatgaa 676
Query: 478 cactggagcacctctttgtataattctgattactttctggccagataatctgctgagaaa 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 cactggagcacctctttgtataattctgattactttctggccagataatctgctgagaaa 736
Query: 538 cccaattcagaccaactgtccccacctgtcaaaagtttttaaattgcattcctgattaat 597
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 737 cccaattcagaccaactgtccccacctgtcaaaagttttaaaattgcattcctgattaat 796
Query: 598 cattgtggaaactaaactttctagttggtggggtttctatttcat 642
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 797 cattgtggaaactaaactttctagttggtggggtttctatttcat 841
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 642
Length of database: 1041
Length adjustment: 10
Effective length of query: 632
Effective length of database: 1031
Effective search space: 651592
Effective search space used: 651592
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no058_e10.g1 MSMg01no058_e10.g1 CHROMAT_FILE:
MSMg01no058_e10.g1 PHD_FILE: MSMg01no058_e10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:00:29 2005
(408 letters)
>mm_chr14_78646223_78647030
Length = 808
Score = 698 bits (361), Expect = 0.0
Identities = 379/385 (98%)
Strand = Plus / Minus
Query: 1 actgtcttcaatagttcagttttccttcgccacatgcccaccactcagggcaggcacact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 actgtcttcaatagttcagttttccttcgccacatgcccaccactcagggcaggcacact 478
Query: 61 ctcgattgcaacttctctgggttcagtgctcccagcttgccaccgcttgcttactggagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 ctcgattgcaacttctctgggttcagtgctcccagcttgccaccgcttgcttactggagc 418
Query: 121 agaagacgatttaagaggcagagatgttgcctctgttagacaaagggatatgcatattac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 agaagacgatttaagaggcagagatgttgcctctgttagacaaagggatatgcatattac 358
Query: 181 atgaggattgctcagactgtgggtcatcactactgaattccaaaccccagaatggctctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 atgaggattgctcagactgtgggtcatcactactgaattccaaaccccagaatggctctc 298
Query: 241 tgctgcttagtttagcctctgtcacttccattaagagttatgagcttagagagaacactg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 297 tgctgcttagtttagcctctgtcacttccattaagagttatgagcttagagagaacagtg 238
Query: 301 tgtgttggtgtttgtgtgggcgtatgtgtgtgttggttatgcatatatatatatatatat 360
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 237 tgtgttggtgtttgtgtgtgcgtatgtgtgtgttggttatgcatatatatatatatatat 178
Query: 361 atatagatagatagatatagatata 385
||||| ||| ||| ||||| |||||
Sbjct: 177 atatatatatatatatatatatata 153
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 53
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 408
Length of database: 808
Length adjustment: 9
Effective length of query: 399
Effective length of database: 799
Effective search space: 318801
Effective search space used: 318801
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
