Query= MSMg01no060_g06.b1 MSMg01no060_g06.b1 CHROMAT_FILE:
MSMg01no060_g06.b1 PHD_FILE: MSMg01no060_g06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:03:07 2005
(238 letters)
>mm_chr14_84876222_84876859
Length = 638
Score = 437 bits (226), Expect = e-127
Identities = 235/238 (98%)
Strand = Plus / Plus
Query: 1 actccatgtcagtttggaagcagtaaaaacgacaaggcttgctttttcacatccttactt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actccatgtcagtttggaagcagtaaaaacgacaaggcttgctttttcacatccttactt 260
Query: 61 ttaatacttaagtaactttcaaaaattttatttcgctccagaaagtaatacccagttcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttaatacttaagtaactttcaaaaattttatttcgctccagaaagtaatacccagttcca 320
Query: 121 ttaagttgtttgatagtaggttttatagttagaatggagtttagaatgaattaaaagtga 180
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 321 ttaagttgtttgatagtaggttttatagttagaatggagtttagagtgaattaaaagtga 380
Query: 181 atccaaccctttataatttgcttgtatctatccattcctagcataatttttgagggaa 238
||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||
Sbjct: 381 atccaaccctttataatttgcttgtatctatccattcctagtaaaatttttgagggaa 438
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 238
Length of database: 638
Length adjustment: 9
Effective length of query: 229
Effective length of database: 629
Effective search space: 144041
Effective search space used: 144041
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no060_g06.g1 MSMg01no060_g06.g1 CHROMAT_FILE:
MSMg01no060_g06.g1 PHD_FILE: MSMg01no060_g06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:03:07 2005
(621 letters)
>mm_chr14_84988821_84989842
Length = 1022
Score = 955 bits (494), Expect = 0.0
Identities = 516/524 (98%), Gaps = 3/524 (0%)
Strand = Plus / Minus
Query: 1 tttactggaatccagccaaaagtaagaagttgacctcatgaacatccttgtctccagcca 60
||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 524 tttactggaatccagtcaaaagtaagaagttgacctcatgaacatccttttctccagcca 465
Query: 61 ttaaacaatatcactattgttttgaccccctacatattgcacaaaactaatttaaatttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 ttaaacaatatcactattgttttgaccccctacatattgcacaaaactaatttaaatttt 405
Query: 121 gtacaaccacaaaaatgatgttgaaatttgtatatatgtgcaccaacacatacaatatgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 gtacaaccacaaaaatgatgttgaaatttgtatatatgtgcaccaacacatacaatatgt 345
Query: 181 tcccagttgtaaata-tttcctctaaattataagtctagtacatttaaaattttattttg 239
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 tcccagttgtaaatattttcctctaaattataagtctagtacatttaaaattttattttg 285
Query: 240 tgtttacctaaaaatactatttactcttttacttaaaaaacatacacctcagatcattct 299
|||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 284 tgtttacctacaaatactatttactcttttacttagaaaacatacacctcagatcattct 225
Query: 300 aatttaaaaataaacttctcacacacacaaacatacacaaacaaaaaacaaagaaat--a 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 224 aatttaaaaataaacttctcacacacacaaacatacacaaacaaaaaacaaagaaataaa 165
Query: 358 aaaaaaacaaaaacaacaaaaatcatcttacctatcatcactctcttgctcctagcagaa 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 164 aaaaaaacaaaaacaacaaaaatcatcttacctatcatcactctcttgctcctagcagaa 105
Query: 418 gcatgatctttgtcagctacaataatatttttaattttttgtaataaatcttcctttttt 477
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 104 gcatgatctttgtcagctacaataatatttttaattttttgtaataaatcttcatttttt 45
Query: 478 attgtttgtgcatatcctgttgcctgcacttatagttgtgcttg 521
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44 attgtttgtgcatatcctgttgcctgcacttatagttgtgcttg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 621
Length of database: 1022
Length adjustment: 10
Effective length of query: 611
Effective length of database: 1012
Effective search space: 618332
Effective search space used: 618332
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
