Query= MSMg01no061_f18.b1 MSMg01no061_f18.b1 CHROMAT_FILE:
MSMg01no061_f18.b1 PHD_FILE: MSMg01no061_f18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:04:18 2005
(243 letters)
>mm_chr14_68347220_68347865
Length = 646
Score = 453 bits (234), Expect = e-132
Identities = 242/246 (98%), Gaps = 3/246 (1%)
Strand = Plus / Plus
Query: 1 gaataaagagcctgacagtatgctggcgcacatgttcaaggacaaaggtcagtaggactt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gaataaagagcctgacagtatgctggcgcacatgttcaaggacaaaggtcagtaggactt 260
Query: 61 gttctcacttttttgtggtccatttttatctgagctgactttgtaactggcgtgggatca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gttctcacttttttgtggtccatttttatctgagctgactttgtaactggcgtgggatca 320
Query: 121 aatcgtttttatggcagtaaagacatgatggtatattatgtgactttttttt---ttctt 177
|||||||||||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 321 aatcgtttttatggcagtaaagacatgatggtatattatgtgacttttttttggtttgtt 380
Query: 178 ctacaaattctgactttgtttttgtttatggggggattttctttattaaaatggtatcac 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctacaaattctgactttgtttttgtttatggggggattttctttattaaaatggtatcac 440
Query: 238 aggtgt 243
||||||
Sbjct: 441 aggtgt 446
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 243
Length of database: 646
Length adjustment: 9
Effective length of query: 234
Effective length of database: 637
Effective search space: 149058
Effective search space used: 149058
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no061_f18.g1 MSMg01no061_f18.g1 CHROMAT_FILE:
MSMg01no061_f18.g1 PHD_FILE: MSMg01no061_f18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:04:18 2005
(473 letters)
>mm_chr14_68476112_68476980
Length = 869
Score = 795 bits (411), Expect = 0.0
Identities = 456/473 (96%), Gaps = 4/473 (0%)
Strand = Plus / Minus
Query: 1 atctaacacaaggcctattggaagatacagtagcccgtacctcatgtagtgggttcaaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 749 atctaacacaaggcctattggaagatacagtagcccgtacctcatgtagtgggttcaaca 690
Query: 61 ccatgctgaaagtaaaaagccaatacctgtgagtgtccccattacagccatcctcaggtt 120
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 689 ccatgctgaaagtaaaaagccaataccagtgagtgtccccattacagccatcctcaggtt 630
Query: 121 gcaaaatcagaggcccctaagtcagggaccacttgtagttttccatagttagcatgtaag 180
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 gcaaaaccagaggcccctaagtcagggaccacttgtagttttccatagttagcatgtaag 570
Query: 181 aaatgtttcatgagtcacatctgtcttaatatattgtcttactctacctgagtactctgc 240
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 569 aaatgtttcatgagtcacatctgtgttaatatattgtcttactctacctgagtactctgc 510
Query: 241 atgtccttgctatctttctcctattgataattgtaggaacacgatgggaggatttatgtg 300
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||
Sbjct: 509 atgtccttgctatctttctcctattgataattgtaggaacacgatggggggatttaagtg 450
Query: 301 agtaaacacagttatgcctaatgtgagtgaggaaattggttcgcccccaattgccatgct 360
||||||||||||||||||||||||||||||||||||||||| | | ||||||||||||||
Sbjct: 449 agtaaacacagttatgcctaatgtgagtgaggaaattggtttgtctccaattgccatgct 390
Query: 361 ggggagtagtaggtgagaagaaacccttgttctttctagagtagagcatggaccagtctt 420
|||||| |||||| ||||||||||||| ||||||||||||| |||||||||||||||| |
Sbjct: 389 ggggagcagtaggagagaagaaaccctcgttctttctagaggagagcatggaccagtcct 330
Query: 421 caggcgactgactgggtgaggtcatatggcgctaacctctccacgaaacgaag 473
||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 caggc----gactgggtgaggtcatatggcgctaacctctccacgaaacgaag 281
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 473
Length of database: 869
Length adjustment: 10
Effective length of query: 463
Effective length of database: 859
Effective search space: 397717
Effective search space used: 397717
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
