Query= MSMg01no061_k22.b1 MSMg01no061_k22.b1 CHROMAT_FILE:
MSMg01no061_k22.b1 PHD_FILE: MSMg01no061_k22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:04:43 2005
(619 letters)
>mm_chr14_71172551_71173569
Length = 1019
Score = 1120 bits (579), Expect = 0.0
Identities = 609/619 (98%), Gaps = 2/619 (0%)
Strand = Plus / Plus
Query: 2 gaattcattccttgtt-ttcaatatcgcatccctatattttgcatagttgagaaactata 60
||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 202 gaattcattccttgtaattca-tatcgcatccctatattttgcatagttgagaaactata 260
Query: 61 tatatatatatattgaactcatgtatttagagttctttcccatagcctcaagggctgtcc 120
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tatatatatatactgaactcatgtatttagagttctttcccatagcctcaagggctgtcc 320
Query: 121 tgaaagtctcagcatttaccatttttctggagacatagccacctcacctttgcctccagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgaaagtctcagcatttaccatttttctggagacatagccacctcacctttgcctccagg 380
Query: 181 cctcactttcgcttcctggactcacgctgtctctgattagcatggagtcattaacattga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cctcactttcgcttcctggactcacgctgtctctgattagcatggagtcattaacattga 440
Query: 241 aacagaggacattcctcagagtgaaaatatgctctacacaaacaagtctccctctcacag 300
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 441 aacagaggacattcctcagagtgaaaatatgcactacacaaacaagtctccctctcacag 500
Query: 301 cagccgttgacacttgtggaggctcacaccaggggctacatgtcactctgtctccaccag 360
||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 501 cagccattgacacttgtggaggctcacaccaggggctacatgtcgctctgtctccaccag 560
Query: 361 ggctacaccaggcctggcacgcatagaagaattggaagttctgaagttcccacagtttaa 420
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgctacaccaggcttggcacgcatagaagaattggaagttctgaagttcccacagtttaa 620
Query: 421 ggtaagtcccacttgaacccaagtgaggaaggaagccaacagctgaggtagacttgggga 480
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 621 ggtaagtcccacttgaacccaagtgaggaaggaagccaacagctgagttagacttgggga 680
Query: 481 ggaaatctttttctagagagaatgttcttatttctagattcaccacagacttgtgtattg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ggaaatctttttctagagagaatgttcttatttctagattcaccacagacttgtgtattg 740
Query: 541 tatgttgttcttattgctagattcaccacagacttgtgtattgtatgtgtttttggcagg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tatgttgttcttattgctagattcaccacagacttgtgtattgtatgtgtttttggcagg 800
Query: 601 caggaaatactttcataca 619
|||||||||||||||||||
Sbjct: 801 caggaaatactttcataca 819
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 619
Length of database: 1019
Length adjustment: 10
Effective length of query: 609
Effective length of database: 1009
Effective search space: 614481
Effective search space used: 614481
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no061_k22.g1 MSMg01no061_k22.g1 CHROMAT_FILE:
MSMg01no061_k22.g1 PHD_FILE: MSMg01no061_k22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:04:44 2005
(580 letters)
>mm_chr14_71316423_71317405
Length = 983
Score = 1052 bits (544), Expect = 0.0
Identities = 573/584 (98%), Gaps = 5/584 (0%)
Strand = Plus / Minus
Query: 1 ataagtgcccaaatggaagtggtgacaaaacagaaagatcagagaggcatctg-gcttag 59
||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||
Sbjct: 783 ataagtgcccaaatggaagtggtgacaaaacagaaagatcagagaggcatctgtg-ttag 725
Query: 60 acaccaaaccagtcataactaacataggggtagcctaactcaacaagactgcctaggttg 119
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 724 acaccaaaccagtcataactaacacaggggtagcctaactcaacaagactgcctaggttg 665
Query: 120 agcataaaaatagtgattaaagcggaagtgggcagaaccatagatgcccatgtttactac 179
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 664 agcataaaaatagtgattaaagcagaagtgggcagaaccatagatgcccatgtttactac 605
Query: 180 gggctgagaagcaatggcacctgagttggaagaaatcaagagggtctcattgcatgaaat 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 gggctgagaagcaatggcacctgagttggaagaaatcaagagggtctcattgcatgaaat 545
Query: 240 caagagtttcttacatgaaggagat---ggagagtcaagtggatgatcaacagacctcaa 296
|||||||||| || |||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 544 caagagtttcaaacttgaaggagatgaaggagagtcaagtggatgatcaacagacctcaa 485
Query: 297 gcaagtagcattgtagactaacaaggagataaagaataaacaaactctaccagagtggga 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 gcaagtagcattgtagactaacaaggagataaagaataaacaaactctaccagagtggga 425
Query: 357 tgattgactggaaagacagagggggaaggagagggacaggagaatggacagaagtgggga 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 tgattgactggaaagacagagggggaaggagagggacaggagaatggacagaagtgggga 365
Query: 417 tcctgtgctataacctaactatcatctcttgtcctcaagaggccacccaactgcagcttt 476
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 tcccgtgctataacctaactatcatctcttgtcctcaagaggccacccaactgcagcttt 305
Query: 477 agttttgtagccattagtctctgaactctctcctaccgcaggtcaaggtctgctggagcc 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 agttttgtagccattagtctctgaactctctcctaccgcaggtcaaggtctgctggagcc 245
Query: 537 ataccaatactaatctgtgaaggctcccagttgcctggagctca 580
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 ataccaatactaatctgtgaaggctcccagttgcctggagctca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 580
Length of database: 983
Length adjustment: 10
Effective length of query: 570
Effective length of database: 973
Effective search space: 554610
Effective search space used: 554610
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
