ATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCTACAACATTCTCAAATTTTATAAAACTTTCAAATTTATAAAACT
TGTTTTAAAACAAGACAATTAGAAATTGTTATAAAAGCATTATCTAGACG
AGAATTTTCCATTAGTTTTAAGAACTATTTATTTAGCTAAGAGTTCTGAG
GAGTGAAATGTCAGGAAAATGACCCGCTAGCTTGGACATTTAGGGCAAGT
TACTACAATTATTCTGTGTTTTAGTTTACCTGAACCCTGAAGTGTAAATA
TATTATATTCCTGTATGAAATCCCCTCCAAATAAAAATCTTTAAATAATG
AAATGGTCAAAAACTGTTTAGTTCACTGAGTTGTCTGTGGACTAAATTAA
TACAGATGTTGTCTGGAATTGAGCCTGTCAGAGAACAAGAACTACACATA
TAAAAAGTTAATTTATTTTAACAGGAAATGACACTGAACTGTAAGAATAC
CTGGTAGGAGGCCAAGTAAACGTGGCTGGATCTAACTGGTATTGATAACA
AACAAAAAGAAAGAGCAATAAGCAGGAGACTCAGCAGAGCTCAGTAAAAA
TGTGTGAGGGATCCTGCTTTGCTAGTCCATGATCTGCTATGAATGAAGAC
TACACCAAAAAGACACAAATGCTACCCAGAAAACCTGGGGCCAGGGGAGT
GAGGTAAG

CCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXCTATAAACATCCATGTGCAGGTTT
TTTTTGTGTGTGTGTGGACATAAGTTTCCAGCTTCTCTGAATAAATACAT
TCCAGAATCTGTAATTGTCACTGGATCATATGGTCAGGATATGTTTAGTT
TTGTAGGAAACTGCCAAATTCTCTCCCCCAGGGGATGTACCATTTATATA
TATGAAATAAAGCTTCCAGTTGCATATGAGAGTTTGCATTGCTCTGTGTC
CTCAGTGACATTTAGAGTTGTCAGTGTTCTGGATTTTGGGCATTCTGATT
GATGGATCTCATTGTTGTTTTAATCTGTATTAGTGTGCTAACACCTGTCT
AGAACTCCTTTTCAGGTGCCGCCCCGTTATTTCTCTATCTACTTTGGGGA
CATATCAAGGATGTTTACTCACTTTTAAACTCCAACATTGTTGTTTTGGT
ACTGATGGATTAGAGAGTTCTTTTTTCTTTTCTTTTTTTATAACTTACTT
ACTTATTTTATGTGTGTGAGTACATCATTGCTGTCTTCAGGACACCATGA
AAGGGCATCTGATCCCATTACAGATGGTTGTGAGTCACCATGCGATTGTC
TGCTATTGAAATTCAAGGTCTCTGAAAAATCATTTTTTGCTCTTATCTGC
TTTACA

Query= MSMg01no061_o11.b1 MSMg01no061_o11.b1 CHROMAT_FILE:
MSMg01no061_o11.b1 PHD_FILE: MSMg01no061_o11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:05:00 2005
         (662 letters)



>mm_chr14_103628867_103629929
          Length = 1063

 Score = 1201 bits (621), Expect = 0.0
 Identities = 649/659 (98%), Gaps = 3/659 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctacaacattctcaaattttataaaactttcaaatttataaaacttgttttaaaa 64
           ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctacaacattcttaaatttt-taaaactttcaaatttataaaacttgttttaaaa 263

                                                                       
Query: 65  caagacaattagaaattgttataaaagcattatctagac--gagaattttccattagttt 122
           ||||||||||||||||||||| |||||||||||||||||  |||||||||||||||||||
Sbjct: 264 caagacaattagaaattgttacaaaagcattatctagacaagagaattttccattagttt 323

                                                                       
Query: 123 taagaactatttatttagctaagagttctgaggagtgaaatgtcaggaaaatgacccgct 182
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 324 taagaactatttatttagctaagagttctgaggggtgaaatgtcaggaaaatgacccgct 383

                                                                       
Query: 183 agcttggacatttagggcaagttactacaattattctgtgttttagtttacctgaaccct 242
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 agcttggacatttaggacaagttactacaattattctgtgttttagtttacctgaaccct 443

                                                                       
Query: 243 gaagtgtaaatatattatattcctgtatgaaatcccctccaaataaaaatctttaaataa 302
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gaagtgtaaatatattatattcctgtatgaaatcccctccaaataaaaatctttaaataa 503

                                                                       
Query: 303 tgaaatggtcaaaaactgtttagttcactgagttgtctgtggactaaattaatacagatg 362
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tgaaatggtcaaaaactgtttagttcactgagttgtctgtggactaaattaatacagatg 563

                                                                       
Query: 363 ttgtctggaattgagcctgtcagagaacaagaactacacatataaaaagttaatttattt 422
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 564 ctgtctggaattgagcctgtcagagaacaagaactacacatataaaaagttaatttcttt 623

                                                                       
Query: 423 taacaggaaatgacactgaactgtaagaatacctggtaggaggccaagtaaacgtggctg 482
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 624 taacaggaaatgacactgaactgtaagaatagctggtaggaggccaagtaaacgtggctg 683

                                                                       
Query: 483 gatctaactggtattgataacaaacaaaaagaaagagcaataagcaggagactcagcaga 542
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 gatctaactggtattgataacaaacaaaaagaaagagcaataagcaggagactcagcaga 743

                                                                       
Query: 543 gctcagtaaaaatgtgtgagggatcctgctttgctagtccatgatctgctatgaatgaag 602
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 gctcagtaaaaatgtgtgagggatcctgctttgctagtccatgatctgctatgaatgaag 803

                                                                      
Query: 603 actacaccaaaaagacacaaatgctacccagaaaacctggggccaggggagtgaggtaa 661
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 actacaccaaaaagacacaaatgctacccagaaaacctggggccaggggagtgaggtaa 862


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 662
Length of database: 1063
Length adjustment: 10
Effective length of query: 652
Effective length of database: 1053
Effective search space:   686556
Effective search space used:   686556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)