Query= MSMg01no062_g20.b1 MSMg01no062_g20.b1 CHROMAT_FILE:
MSMg01no062_g20.b1 PHD_FILE: MSMg01no062_g20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:06:00 2005
(649 letters)
>mm_chr14_98462406_98463454
Length = 1049
Score = 1224 bits (633), Expect = 0.0
Identities = 645/649 (99%)
Strand = Plus / Plus
Query: 1 aaagaataaatgaaaagaggcctaattgtcttaccaggagttataagagaacccagtatt 60
|||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||
Sbjct: 201 aaagaataaatgaaaagaggcctaattgtcttacaaggagttataagagaagttagtatt 260
Query: 61 gcaataaacggactttttagcagtaaaatcgaacatttcatttcaaatgcttgaatagcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcaataaacggactttttagcagtaaaatcgaacatttcatttcaaatgcttgaatagcc 320
Query: 121 aaactttataaaaatgaaatggggctgtgcatggtggtgcatgcttttagtcttagaact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaactttataaaaatgaaatggggctgtgcatggtggtgcatgcttttagtcttagaact 380
Query: 181 cagattgaagaaggcagatctcagaatctgaggctagccttgtttacagagaagagtacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cagattgaagaaggcagatctcagaatctgaggctagccttgtttacagagaagagtacc 440
Query: 241 aggtcagctgggactacacagagaaacactgtttaaaagaaagcatcacccacaaaacac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aggtcagctgggactacacagagaaacactgtttaaaagaaagcatcacccacaaaacac 500
Query: 301 aataaagaaagaataaaattgtttggtaattaagtttaaccgttatctctttatttttag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aataaagaaagaataaaattgtttggtaattaagtttaaccgttatctctttatttttag 560
Query: 361 tacagtaattaaatggtaaaatggggcatgaaagcattgatcaattgtcccaatataatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tacagtaattaaatggtaaaatggggcatgaaagcattgatcaattgtcccaatataatt 620
Query: 421 tgtatggtaaattcatatttttcataattagaaaaatataaattgactttgataccaaca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tgtatggtaaattcatatttttcataattagaaaaatataaattgactttgataccaaca 680
Query: 481 ataaaagaaatatattcagtaaatgctatctaatatttgtacactacttttaatgctttc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ataaaagaaatatattcagtaaatgctatctaatatttgtacactacttttaatgctttc 740
Query: 541 tttattatgagaaaacactagtatgtaattcatataattgacttgtattataattaaatg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tttattatgagaaaacactagtatgtaattcatataattgacttgtattataattaaatg 800
Query: 601 tgagaagagtgggaaccatcaacgaagcacacatatcagtgtccgaatt 649
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 tgagaagagtgggaaccatcaacgaagcacacatatcagtgtccgaatt 849
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 649
Length of database: 1049
Length adjustment: 10
Effective length of query: 639
Effective length of database: 1039
Effective search space: 663921
Effective search space used: 663921
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no062_g20.g1 MSMg01no062_g20.g1 CHROMAT_FILE:
MSMg01no062_g20.g1 PHD_FILE: MSMg01no062_g20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:06:01 2005
(749 letters)
>mm_chr14_98578293_98579440
Length = 1148
Score = 1417 bits (733), Expect = 0.0
Identities = 745/749 (99%), Gaps = 1/749 (0%)
Strand = Plus / Minus
Query: 1 gcaacaggctgaagtttgtcctaacgctgccaatcagacatatttcaacaccagttaaat 60
||||||||||||||||||||||||||||| ||||||||||||||||| | |||||||||
Sbjct: 948 gcaacaggctgaagtttgtcctaacgctg-gaatcagacatatttcaaaatcagttaaat 890
Query: 61 gagctcctgggagaaggagatccattttctgctcatctgagctggttgcttcccaggaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 889 gagctcctgggagaaggagatccattttctgctcatctgagctggttgcttcccaggaga 830
Query: 121 taacaagtagataggtcccagtccacctccccaggagtccctgacaccttgttgacatcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 829 taacaagtagataggtcccagtccacctccccaggagtccctgacaccttgttgacatcc 770
Query: 181 cctggtgttctgtggcttctggcactttgatgcattccacagctcaagactttgaagaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 769 cctggtgttctgtggcttctggcactttgatgcattccacagctcaagactttgaagaca 710
Query: 241 caggccattcaagtccccctcacttccctctaaagggagagaaaatgaaaaagtcaagca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 709 caggccattcaagtccccctcacttccctctaaagggagagaaaatgaaaaagtcaagca 650
Query: 301 ggtcagataatttaaatggggtggcaggaggccttgttattgctctgtcaggaatagctg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 ggtcagataatttaaatggggtggcaggaggccttgttattgctctgtcaggaatagctg 590
Query: 361 ccagtgatccctaaatcatctactggaaaagtagtaagagatcttcctttaaatcaggat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 ccagtgatccctaaatcatctactggaaaagtagtaagagatcttcctttaaatcaggat 530
Query: 421 aaaacattggagaagaagtcgagataactccccagacaaaagcagattagggccagggaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 aaaacattggagaagaagtcgagataactccccagacaaaagcagattagggccagggaa 470
Query: 481 agactacagaaaagctaagtgtgtaaaccatgccctgtccctttaaggcctagtgcctca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 agactacagaaaagctaagtgtgtaaaccatgccctgtccctttaaggcctagtgcctca 410
Query: 541 ggtaacttttatgggggtaggaagtcgggatgctgttatactctaaccagggaagtcaga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 ggtaacttttatgggggtaggaagtcgggatgctgttatactctaaccagggaagtcaga 350
Query: 601 gagttttcaagaaatactgtagattttgccattgcacttttattaaatgtttttcaagat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 gagttttcaagaaatactgtagattttgccattgcacttttattaaatgtttttcaagat 290
Query: 661 ctcagaagtgtctttgggaccagtattgaacatttacccgcatgatgctggcttgtttct 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 ctcagaagtgtctttgggaccagtattgaacatttacccgcatgatgctggcttgtttct 230
Query: 721 catgagtgtttacctctaagcagactctg 749
|||||||||||||||||||||||||||||
Sbjct: 229 catgagtgtttacctctaagcagactctg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 749
Length of database: 1148
Length adjustment: 10
Effective length of query: 739
Effective length of database: 1138
Effective search space: 840982
Effective search space used: 840982
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
|
