Query= MSMg01no062_m23.b1 MSMg01no062_m23.b1 CHROMAT_FILE:
MSMg01no062_m23.b1 PHD_FILE: MSMg01no062_m23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:06:47 2005
(361 letters)
>mm_chr14_24497507_24498267
Length = 761
Score = 690 bits (357), Expect = 0.0
Identities = 360/361 (99%)
Strand = Plus / Minus
Query: 1 atctctggaatgcgcttgactttctcaggaacctgaaagagaatggtgtccttgtcaagc 60
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atctctggaatgtgcttgactttctcaggaacctgaaagagaatggtgtccttgtcaagc 502
Query: 61 tgtcatgcccagcaggcaccatattggttaatagtggggccactgaggtttcttgttggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgtcatgcccagcaggcaccatattggttaatagtggggccactgaggtttcttgttggc 442
Query: 121 agaaaattgttggctgctggctgaaatggaaatgagtccccatttgcttccccttcttgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agaaaattgttggctgctggctgaaatggaaatgagtccccatttgcttccccttcttgt 382
Query: 181 ccattgagagtcacgtggcttaaagttctaagcagacaattttgggactggtggaagaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccattgagagtcacgtggcttaaagttctaagcagacaattttgggactggtggaagaga 322
Query: 241 aaatatgtgtgttttatggaatatattaggtcaaggagaaagatgggcatctatgggtgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaatatgtgtgttttatggaatatattaggtcaaggagaaagatgggcatctatgggtgg 262
Query: 301 cagagactgggtaggcatatactcatctttttccatccatccatcatcaaaacttagaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cagagactgggtaggcatatactcatctttttccatccatccatcatcaaaacttagaaa 202
Query: 361 a 361
|
Sbjct: 201 a 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 361
Length of database: 761
Length adjustment: 9
Effective length of query: 352
Effective length of database: 752
Effective search space: 264704
Effective search space used: 264704
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no062_m23.g1 MSMg01no062_m23.g1 CHROMAT_FILE:
MSMg01no062_m23.g1 PHD_FILE: MSMg01no062_m23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:06:47 2005
(675 letters)
>mm_chr14_24378361_24379435
Length = 1075
Score = 1230 bits (636), Expect = 0.0
Identities = 666/677 (98%), Gaps = 4/677 (0%)
Strand = Plus / Plus
Query: 1 tgctcctcggngggactgaaggctggttccct-t-acatttgcaaaccctttactgctaa 58
|||||||||| ||||||||||||||||| || | ||||||||||||| |||||||||||
Sbjct: 201 tgctcctcggtgggactgaaggctggtt--ctatgacatttgcaaaccttttactgctaa 258
Query: 59 agacagcatcatccttctaaggacaagactgtgatgattagtggatctcatatgtgtttt 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 agacagcatcatccttctaaggacaagactgtgatgattagtggatctcatatgtgtttt 318
Query: 119 caaatgtctcatcatatagagcatgctacataatcactcctgttctccaaagtcccttgc 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 caaatgtctcatcatatagagcatgctacataatcactcctgttctccaaagtcccttgc 378
Query: 179 aggtgctcaatggattggtccccactgaagcaaacatctttctgagagttgttgaccaca 238
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 aggtgctcaatggattagtccccactgaagcaaacatctttctgagagttgttgaccaca 438
Query: 239 gtgggagaggaatgtggataaaggaagaaagctataagggaaggagggaggtcaattctg 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 gtgggagaggaatgtggataaaggaagaaagctataagggaaggagggaggtcaattctg 498
Query: 299 aagctagaagtgaactgatatcctattatctgctgttggcaagtaagttctatgcttaac 358
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 499 aagctagaagtgaactgatagcctattatctgctgttggcaagtaagttctatgcttaac 558
Query: 359 caattaaagagtcaaccaatgcctgtggtttgaagcagagaacatgaatgttaaggctgc 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 caattaaagagtcaaccaatgcctgtggtttgaagcagagaacatgaatgttaaggctgc 618
Query: 419 atctattataatcaaacatgtattccttatgctatgacttactatcagagttccagttca 478
||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 619 atctattataaccaaacatgtattccttatgctatgacttactaccagagttccagttcg 678
Query: 479 gtcaaactcaatgccattgggtcaactccttttctctcttgctaaaaccaaggaccgagc 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 gtcaaactcaatgccattgggtcaactccttttctctcttgctaaaaccaaggaccgagc 738
Query: 539 acctgtgttgtgtgatcagcactcaggatacaaggaagagtgtgcttctcttgaatcctt 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 acctgtgttgtgtgatcagcactcaggatacaaggaagagtgtgcttctcttgaatcctt 798
Query: 599 gactgaactattcaggagactcttgccccatctccagtcacatggcttacccatctccct 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 799 gactgaactattcaggagactcttgccccatctccagtcacatggcttacccatctccct 858
Query: 659 ggtccttctctccttcc 675
|||||||||||||||||
Sbjct: 859 ggtccttctctccttcc 875
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 675
Length of database: 1075
Length adjustment: 10
Effective length of query: 665
Effective length of database: 1065
Effective search space: 708225
Effective search space used: 708225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
