Query= MSMg01no062_o14.b1 MSMg01no062_o14.b1 CHROMAT_FILE:
MSMg01no062_o14.b1 PHD_FILE: MSMg01no062_o14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:07:00 2005
(734 letters)
>mm_chr14_17259959_17261092
Length = 1134
Score = 1381 bits (714), Expect = 0.0
Identities = 729/734 (99%)
Strand = Plus / Minus
Query: 1 atgagtagtcattaaaccaacaaatgttttccctctgcttgatgccaataccaagataaa 60
|||||||||||||||||||| |||||||||| |||||||||||||||||| ||||||||
Sbjct: 934 atgagtagtcattaaaccaagaaatgttttctctctgcttgatgccaatataaagataaa 875
Query: 61 tatcatcccatagatgataaaacaagtattattcaatttggcatactttaatttttaggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 874 tatcatcccatagatgataaaacaagtattattcaatttggcatactttaatttttaggt 815
Query: 121 aattcaattgagatagtttaagcaaagaatattaaaggaaattataccgcatcttttaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 814 aattcaattgagatagtttaagcaaagaatattaaaggaaattataccgcatcttttaaa 755
Query: 181 tatatattcatgacaaaaaattatatttgacacactaattatataacccatgtacaagca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 754 tatatattcatgacaaaaaattatatttgacacactaattatataacccatgtacaagca 695
Query: 241 cacactaagttgtagcttataaatataatttagtagagggaaaaattttattggttctct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 694 cacactaagttgtagcttataaatataatttagtagagggaaaaattttattggttctct 635
Query: 301 tgtcctcaaatagaacaaatacaaagcaactcatttccctccagtagttaaaatcaagac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 tgtcctcaaatagaacaaatacaaagcaactcatttccctccagtagttaaaatcaagac 575
Query: 361 ttggcatttttatctggaaagaaacatgcaaatcctagatccatagatacaaggaccact 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 ttggcatttttatctggaaagaaacatgcaaatcctagatccatagatacaaggaccact 515
Query: 421 ttattactattatgtttacaaaagaaaccttgtgtttatggttcatataaacactataat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 ttattactattatgtttacaaaagaaaccttgtgtttatggttcatataaacactataat 455
Query: 481 cactttgtacttgtgcaataaaaatgagaccggaaaacaaatgtattagactgactgaaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 cactttgtacttgtgcaataaaaatgagaccggaaaacaaatgtattagactgactgaaa 395
Query: 541 tgagtggcagaggttcctattagaaactgaaaaatgttgctaatacactgaaaagcagaa 600
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 394 tgagtggcagaggttcctattagaaactgaaaaacgttgctaatacactgaaaagcagaa 335
Query: 601 ctgagtctccagctgagataaaacatagtgcccctcactggtgaacagcagaaggaactg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 ctgagtctccagctgagataaaacatagtgcccctcactggtgaacagcagaaggaactg 275
Query: 661 tgcatgaagagggagccgaagactatggcctttactccttctgattactcatgactaaat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 tgcatgaagagggagccgaagactatggcctttactccttctgattactcatgactaaat 215
Query: 721 ctactacaggaatc 734
||||||||||||||
Sbjct: 214 ctactacaggaatc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 734
Length of database: 1134
Length adjustment: 10
Effective length of query: 724
Effective length of database: 1124
Effective search space: 813776
Effective search space used: 813776
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no062_o14.g1 MSMg01no062_o14.g1 CHROMAT_FILE:
MSMg01no062_o14.g1 PHD_FILE: MSMg01no062_o14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:07:00 2005
(614 letters)
>mm_chr14_17104374_17105386
Length = 1013
Score = 1116 bits (577), Expect = 0.0
Identities = 604/613 (98%), Gaps = 3/613 (0%)
Strand = Plus / Plus
Query: 1 aaaggtagacacaggttcacttttgttattccatattatttattgatgcccaataattcc 60
|||||||||||||||||||| ||||||||| ||||||||||||||||| |||||||||
Sbjct: 201 aaaggtagacacaggttcac-tttgttattagatattatttattgatgcagaataattcc 259
Query: 61 acaacagttgcttttgtataagctcaggcttgctacttacactgagcatcccctctgcct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 acaacagttgcttttgtataagctcaggcttgctacttacactgagcatcccctctgcct 319
Query: 121 ctgtccctccatctggaaatacaaataattaaaagaacaaatgaattagtacatttaaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ctgtccctccatctggaaatacaaataattaaaagaacaaatgaattagtacatttaaac 379
Query: 181 agcccagaacaatagttttgacctttataatcgtttggtaacattaataagtctcaggat 240
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 380 agcccagaacaatagttttgacctttataattgtttggtaacattaataagtctcaggat 439
Query: 241 tttagttgttagtatttttatgtccatagggtttttgctttttatgtaattgatttttat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tttagttgttagtatttttatgtccatagggtttttgctttttatgtaattgatttttat 499
Query: 301 ctagtcatcttattgttcagtactctgtttattagctcactggatgtttgggggaaaggg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 ctagtcatcttattgttcagtactctgtttattagctcactggatgtttgggggaaaggg 559
Query: 361 gttgccatgttttataataagcattttttagtactgtatcttcagagtcctagtcacttg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 gttgccatgttttataataagcattttttagtactgtatcttcagagtcctagtcacttg 619
Query: 421 tgtgcactgcaggcaccttgtgaaaggcaccttgcctttattcccccc-acagtggtggt 479
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 620 tgtgcactgcaggcaccttgtgaaaggcaccttgcctttattcccccccacagtggtggt 679
Query: 480 gctgaaatttatttcactgtcctacactgtgatgactcaggcagtgttgttatgtgttgg 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 gctgaaatttatttcactgtcctacactgtgatgactcaggcagtgttgttatgtgttgg 739
Query: 540 atcaagattaggaaaaggaatgttcttttttaaccttaatctgatctttccctgtgttcc 599
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 atcaagattagggaaaggaatgttcttttttaaccttaatctgatctttccctgtgttcc 799
Query: 600 ctcatttcttgat 612
||||||||||||
Sbjct: 800 -tcatttcttgat 811
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 614
Length of database: 1013
Length adjustment: 10
Effective length of query: 604
Effective length of database: 1003
Effective search space: 605812
Effective search space used: 605812
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
