Query= MSMg01no063_p14.b1 MSMg01no063_p14.b1 CHROMAT_FILE:
MSMg01no063_p14.b1 PHD_FILE: MSMg01no063_p14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:08:33 2005
(471 letters)
>mm_chr14_73712083_73712953
Length = 871
Score = 774 bits (400), Expect = 0.0
Identities = 424/432 (98%)
Strand = Plus / Minus
Query: 40 ctcctgacacagctgcaacacttgtgtgtaaccccacaattgagagacagaaacagatga 99
||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||
Sbjct: 871 ctcctgacacagctgcaacacttatgtgtaaccccagaattgagagacagaaacagatga 812
Query: 100 atcctggggtcttggtagtcagccagcctaatctaaatggccagctccaggctcagtggg 159
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 811 atcctggggtcttggtagtcagccagcctaatctaaatggccagctccaggctcagcggg 752
Query: 160 agaacaggtctcagaagaataaggtagaggtgacagaggaagagatccagtgtccatctc 219
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 751 agaacaggtctcagaagaataaggtagaggtgacagaggaagagatccagtgtccatctc 692
Query: 220 tggccttcgtacatgcatacgtggatgagcacacatacacacacatagttaaaaggaggt 279
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 tggccttcgtacatgcatacgtggatgagcacacatacacacacatagttaaaaggaggt 632
Query: 280 aaagcaacttcagtctgggttcaggtggatgtgttcaagagttcaacatctatggcagct 339
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 631 aaagcaacttcagtctgggttcaggtggatgtgttcaagagttcaatatctatggcagct 572
Query: 340 atagacttacataatgtttcttaaattttgatttggaagtcagaattattccttgattta 399
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 571 atagacttacataatgtttcttaaattttgatttagaagtcagaattattccttgattta 512
Query: 400 tactgctgatgaaattttaattcagtgggcatgaaaacaatgttacctggtacatctctt 459
||||||||||| ||||||||| ||||||||||||||||||| ||||||||||||||||||
Sbjct: 511 tactgctgatggaattttaatccagtgggcatgaaaacaatattacctggtacatctctt 452
Query: 460 ttagagccctag 471
||||||||||||
Sbjct: 451 ttagagccctag 440
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 471
Length of database: 871
Length adjustment: 10
Effective length of query: 461
Effective length of database: 861
Effective search space: 396921
Effective search space used: 396921
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no063_p14.g1 MSMg01no063_p14.g1 CHROMAT_FILE:
MSMg01no063_p14.g1 PHD_FILE: MSMg01no063_p14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:08:33 2005
(447 letters)
>mm_chr14_73656549_73657396
Length = 848
Score = 812 bits (420), Expect = 0.0
Identities = 441/448 (98%), Gaps = 1/448 (0%)
Strand = Plus / Plus
Query: 1 catatcactaatcacactgatgtaaaacttctagaagctgaccatggtggcatgcttata 60
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 201 catatcactaatcacactgatgtaaaacttctagaagctgagcatggtggcatgcttata 260
Query: 61 atcccagaagctgggatacaaggcagaaagactgttctgaacaatgactgcagcacaaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atcccagaagctgggatacaaggcagaaagactgttctgaacaatgactgcagcacaaac 320
Query: 121 aggttacaggagacgctgcctcaaaagaacc-aaaaaaaccaaacacacaacaaacaaaa 179
|||||||||||||| |||||||||||||||| ||||||| ||||||||||||||||||||
Sbjct: 321 aggttacaggagactctgcctcaaaagaaccaaaaaaaaacaaacacacaacaaacaaaa 380
Query: 180 atcagagagaatagaggagtgggggaagggacaaaaaggaaagaggaagatgagagacag 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atcagagagaatagaggagtgggggaagggacaaaaaggaaagaggaagatgagagacag 440
Query: 240 agaaatgaaatgtttcaaatgtctcaaagaaagattattatccaactgatgacaataaaa 299
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agaaatgaaatatttcaaatgtctcaaagaaagattattatccaactgatgacaataaaa 500
Query: 300 acccagatcaagatccaatgatgcactgccttacggcgatacgcattcacttgaagaaaa 359
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 501 acccagatcaagatccaatgatgcactgccttagggcgatacgcattcacttgaagaaaa 560
Query: 360 tgacacagataagttacaaactaaataaagggagagagagccatatcgctattaacggaa 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgacacagataagttacaaactaaataaagggagagagagccatatcgctattaacggaa 620
Query: 420 gaaagctgaaacacatttcctacgtgag 447
|||||||||||||| |||||||||||||
Sbjct: 621 gaaagctgaaacacgtttcctacgtgag 648
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 447
Length of database: 848
Length adjustment: 10
Effective length of query: 437
Effective length of database: 838
Effective search space: 366206
Effective search space used: 366206
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
