Query= MSMg01no064_e03.b1 MSMg01no064_e03.b1 CHROMAT_FILE:
MSMg01no064_e03.b1 PHD_FILE: MSMg01no064_e03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:09:02 2005
(775 letters)
>mm_chr14_96862577_96863751
Length = 1175
Score = 1469 bits (760), Expect = 0.0
Identities = 772/776 (99%), Gaps = 2/776 (0%)
Strand = Plus / Minus
Query: 1 aaatccttgcatcatctgatattcaggtatccctt-aacaaagacaccacttttcatgtt 59
|||||||||||||||||||||||||||||| | || | ||||||||||||||||||||||
Sbjct: 975 aaatccttgcatcatctgatattcaggtat-cattgagcaaagacaccacttttcatgtt 917
Query: 60 catggaaatctgtgaaagagctggttttatctggtttacattatcttctatatatatttt 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 916 catggaaatctgtgaaagagctggttttatctggtttacattatcttctatatatatttt 857
Query: 120 attcttattcacataattaaaaaatatgtactccacagaaaatattttttttctaaattt 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 856 attcttattcacataattaaaaaatatgtactccacagaaaatattttttttctaaattt 797
Query: 180 tctactgtcattaagaactgtgtttaaaacaattattcttgtagagtgtattactaatga 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 796 tctactgtcattaagaactgtgtttaaaacaattattcttgtagagtgtattactaatga 737
Query: 240 tggataaattaagaaaaaagataacttctttctcaacgtcagctgttgaaagaaaacaga 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 tggataaattaagaaaaaagataacttctttctcaacgtcagctgttgaaagaaaacaga 677
Query: 300 agcagttctacttcaatgttcctttctattcagttgttcctcatcttttcccactacctc 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 agcagttctacttcaatgttcctttctattcagttgttcctcatcttttcccactacctc 617
Query: 360 caatatcattcaaaactagggcacccttatcatatgctattaagctggaactgatcatat 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 caatatcattcaaaactagggcacccttatcatatgctattaagctggaactgatcatat 557
Query: 420 tctcaaggtcatctaaaagcaatattcataacttcagttaaaaaatagtaaaaaagaaat 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 tctcaaggtcatctaaaagcaatattcataacttcagttaaaaaatagtaaaaaagaaat 497
Query: 480 cctttataaatgtatttcaaaatgttagtaactttactgatataaattttaggtattatt 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 cctttataaatgtatttcaaaatgttagtaactttactgatataaattttaggtattatt 437
Query: 540 atgtacaactgtatctaaaatgttaacaaaacagaaacatggaatgaggaaatactgaca 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 atgtacaactgtatctaaaatgttaacaaaacagaaacatggaatgaggaaatactgaca 377
Query: 600 aataagtcggtaaaggtcattgatcacttccccctggcaataggcaaagggacaaacctc 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 aataagtcggtaaaggtcattgatcacttccccctggcaataggcaaagggacaaacctc 317
Query: 660 tggtggtgttcttgtactactcaggggcagagtcaatagcattcctttggttttgatgcc 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 tggtggtgttcttgtactactcaggggcagagtcaatagcattcctttggttttgatgcc 257
Query: 720 tggcttggtggctaaagctgattcacgttgaggattcataaaacctaaacaaaatc 775
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 tggcttggtggctaaagctgattcacgttgaggattcataaaacctaaacaaaatc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 39
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 775
Length of database: 1175
Length adjustment: 10
Effective length of query: 765
Effective length of database: 1165
Effective search space: 891225
Effective search space used: 891225
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no064_e03.g1 MSMg01no064_e03.g1 CHROMAT_FILE:
MSMg01no064_e03.g1 PHD_FILE: MSMg01no064_e03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:09:02 2005
(395 letters)
>mm_chr14_96780912_96781706
Length = 795
Score = 721 bits (373), Expect = 0.0
Identities = 384/391 (98%), Gaps = 6/391 (1%)
Strand = Plus / Plus
Query: 1 ttcggagctgctggaatccaaatcactttgaggtgtcagtgaatgattggtcgatgtcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttcggagctgctggaatccaaatcactttgaggtgtcagtgaatgattggtcgatgtcaa 260
Query: 61 cctgtaaatcacacacagagaagaaaagatgatgtttataaagtgtcagtaatggttcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cctgtaaatcacacacagagaagaaaagatgatgtttataaagtgtcagtaatggttcag 320
Query: 121 aaatttatttcttttataaatttaggtcagcaatttagggaaatctttctttcagacatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaatttatttcttttataaatttaggtcagcaatttagggaaatctttctttcagacatt 380
Query: 181 atcatataaaacaagtatataaaatcatttacacacacacacacacacacacacacacac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atcatataaaacaagtatataaaatcatttacacacacacacacacacacacacacacac 440
Query: 241 aca------aacacacacacacacacacacacacacacatacacacacacatatatccac 294
||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acacacacaaacacacacacacacacacacacacacacatacacacacacatatatccac 500
Query: 295 atcccaaatgctatcccagcttctggttcccctcttacagattccttcccacatcctcct 354
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 501 atcccaaatgctatcccagcttctggttcccctcttacagagtccttcccacatcctcct 560
Query: 355 tctcttccctaagagggtgggtcccctggaa 385
|||||||||||||||||||||||||||||||
Sbjct: 561 tctcttccctaagagggtgggtcccctggaa 591
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 125
Number of extensions: 17
Number of successful extensions: 17
Number of sequences better than 10.0: 1
Number of HSP's gapped: 10
Number of HSP's successfully gapped: 1
Length of query: 395
Length of database: 795
Length adjustment: 9
Effective length of query: 386
Effective length of database: 786
Effective search space: 303396
Effective search space used: 303396
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
